RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W MTC1P47018 478 aaKnown RBP18.94■□□□□ 0.62
RER1YCL001W FAP1P53971 965 aa18.11■□□□□ 0.49
RER1YCL001W DRS1P32892 752 aaKnown RBP17.52■□□□□ 0.4
RER1YCL001W PRY3P47033 881 aa17.04■□□□□ 0.32
RER1YCL001W AAD16Q02895 342 aa16.52■□□□□ 0.24
RER1YCL001W PRI1P10363 409 aa16.5■□□□□ 0.23
RER1YCL001W YCK3P39962 524 aa16.01■□□□□ 0.15
RER1YCL001W HAA1Q12753 694 aaKnown RBP15.99■□□□□ 0.15
RER1YCL001W ISW2Q08773 1120 aa15.94■□□□□ 0.14
RER1YCL001W RPG1P38249 964 aaKnown RBP15.74■□□□□ 0.11
RER1YCL001W TSR3Q12094 313 aaKnown RBP15.5■□□□□ 0.07
RER1YCL001W DIP2Q12220 943 aaPredicted RBP15.34■□□□□ 0.05
RER1YCL001W MRPL32P25348 183 aa14.96□□□□□ -0.01
RER1YCL001W AVT3P36062 692 aa14.85□□□□□ -0.03
RER1YCL001W RSE1Q04693 1361 aaKnown RBP14.83□□□□□ -0.04
RER1YCL001W YGL015CP33199 130 aa14.63□□□□□ -0.07
RER1YCL001W BFR2Q06631 534 aaKnown RBP14.63□□□□□ -0.07
RER1YCL001W REB1P21538 810 aa14.41□□□□□ -0.1
RER1YCL001W RPL17AP05740 184 aaKnown RBP14.35□□□□□ -0.11
RER1YCL001W RPL17BP46990 184 aaKnown RBP14.35□□□□□ -0.11
RER1YCL001W CDC27P38042 758 aa13.98□□□□□ -0.17
RER1YCL001W BUD31P25337 157 aaPredicted RBP13.82□□□□□ -0.2
RER1YCL001W UBP10P53874 792 aaPredicted RBP13.8□□□□□ -0.2
RER1YCL001W SPT21P35209 758 aa13.76□□□□□ -0.21
RER1YCL001W YKR023WP36119 530 aaKnown RBP13.73□□□□□ -0.21
RER1YCL001W MAP2P38174 421 aaKnown RBP13.67□□□□□ -0.22
RER1YCL001W TFC8Q12308 588 aa13.46□□□□□ -0.25
RER1YCL001W HOP09932 586 aa13.43□□□□□ -0.26
RER1YCL001W DCD1P06773 312 aa13.38□□□□□ -0.27
RER1YCL001W RIM101P33400 625 aa13.3□□□□□ -0.28
RER1YCL001W TIF4632P39936 914 aaKnown RBP13.25□□□□□ -0.29
RER1YCL001W SCY1P53009 804 aa13.24□□□□□ -0.29
RER1YCL001W TGL3P40308 642 aa13.19□□□□□ -0.3
RER1YCL001W SLX5P32828 619 aaKnown RBP13.16□□□□□ -0.3
RER1YCL001W UBP9P39967 754 aa13.11□□□□□ -0.31
RER1YCL001W SIS1P25294 352 aaKnown RBP13.06□□□□□ -0.32
RER1YCL001W TFA1P36100 482 aa12.97□□□□□ -0.33
RER1YCL001W BCH2P36122 765 aa12.97□□□□□ -0.33
RER1YCL001W OXP1P28273 1286 aa12.83□□□□□ -0.36
RER1YCL001W YIL055CP40523 627 aaKnown RBP12.63□□□□□ -0.39
RER1YCL001W PTP3P40048 928 aa12.61□□□□□ -0.39
RER1YCL001W EPS1P40557 701 aa12.59□□□□□ -0.39
RER1YCL001W BDF1P35817 686 aa12.57□□□□□ -0.4
RER1YCL001W MST1P07236 462 aa12.52□□□□□ -0.41
RER1YCL001W RSM7P47150 247 aa12.46□□□□□ -0.41
RER1YCL001W YOR238WQ08634 303 aa12.44□□□□□ -0.42
RER1YCL001W YAH1Q12184 172 aaKnown RBP12.43□□□□□ -0.42
RER1YCL001W YBL029C-AQ3E756 94 aa12.43□□□□□ -0.42
RER1YCL001W NSR1P27476 414 aaKnown RBP RIP-Chip data12.36□□□□□ -0.43not detected
RER1YCL001W BBC1P47068 1157 aa12.35□□□□□ -0.43
RER1YCL001W AI2P03876 854 aa12.34□□□□□ -0.43
RER1YCL001W VNX1P42839 908 aa12.28□□□□□ -0.44
RER1YCL001W YLR271WQ06152 274 aa12.26□□□□□ -0.45
RER1YCL001W YAP5P40574 245 aa12.22□□□□□ -0.45
RER1YCL001W SPP1Q03012 353 aa12.18□□□□□ -0.46
RER1YCL001W SSP1P38871 571 aa12.14□□□□□ -0.47
RER1YCL001W PSD2P53037 1138 aaKnown RBP12.1□□□□□ -0.47
RER1YCL001W WSC3Q12215 556 aa12.09□□□□□ -0.47
RER1YCL001W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.07□□□□□ -0.48not detected
RER1YCL001W TIF11P38912 153 aaKnown RBP12□□□□□ -0.49
RER1YCL001W AIR2Q12476 344 aaKnown RBP12□□□□□ -0.49
RER1YCL001W GTT3P39996 337 aa11.99□□□□□ -0.49
RER1YCL001W YJL171CP46992 396 aa11.98□□□□□ -0.49
RER1YCL001W FKH1P40466 484 aa11.97□□□□□ -0.49
RER1YCL001W MRM1P25270 412 aa11.89□□□□□ -0.51
RER1YCL001W MGA2P40578 1113 aa11.85□□□□□ -0.51
RER1YCL001W CST9Q06032 482 aa11.82□□□□□ -0.52
RER1YCL001W LDB19Q12502 818 aa11.82□□□□□ -0.52
RER1YCL001W ULI1P43604 169 aa11.79□□□□□ -0.52
RER1YCL001W IOC2Q12072 812 aa11.76□□□□□ -0.53
RER1YCL001W BMT6Q12291 365 aa11.73□□□□□ -0.53
RER1YCL001W PIB1Q06651 286 aa11.71□□□□□ -0.53
RER1YCL001W MSB4Q12317 492 aa11.69□□□□□ -0.54
RER1YCL001W RTG3P38165 486 aa11.66□□□□□ -0.54
RER1YCL001W EAP1P36041 632 aaKnown RBP11.65□□□□□ -0.54
RER1YCL001W VPS29P38759 282 aa11.65□□□□□ -0.54
RER1YCL001W YMR1P47147 688 aaKnown RBP RIP-Chip data11.63□□□□□ -0.55not detected
RER1YCL001W DBP1P24784 617 aaKnown RBP11.55□□□□□ -0.56
RER1YCL001W RTG1P32607 177 aa11.53□□□□□ -0.56
RER1YCL001W RCR1P38212 213 aa11.53□□□□□ -0.56
RER1YCL001W YOL036WQ08206 761 aa11.53□□□□□ -0.56
RER1YCL001W STS1P38637 319 aa11.51□□□□□ -0.57
RER1YCL001W SET4P42948 560 aa11.51□□□□□ -0.57
RER1YCL001W YFR006WP43590 535 aa11.5□□□□□ -0.57
RER1YCL001W TRP5P00931 707 aaKnown RBP11.49□□□□□ -0.57
RER1YCL001W NCR1Q12200 1170 aa11.48□□□□□ -0.57
RER1YCL001W YNL035CP53962 389 aaKnown RBP11.44□□□□□ -0.58
RER1YCL001W VMA1P17255 1071 aaKnown RBP11.43□□□□□ -0.58
RER1YCL001W SEC61P32915 480 aa11.43□□□□□ -0.58
RER1YCL001W SAM3Q08986 587 aa11.39□□□□□ -0.59
RER1YCL001W TFG1P41895 735 aaPredicted RBP11.31□□□□□ -0.6
RER1YCL001W RAM2P29703 316 aa11.25□□□□□ -0.61
RER1YCL001W JIP4Q03361 876 aa11.23□□□□□ -0.61
RER1YCL001W ABP1P15891 592 aaKnown RBP11.22□□□□□ -0.61
RER1YCL001W MAK11P20484 414 aaKnown RBP11.21□□□□□ -0.61
RER1YCL001W DAN4P47179 1161 aa11.2□□□□□ -0.62
RER1YCL001W GYP5Q12344 894 aa11.2□□□□□ -0.62
RER1YCL001W SAP30P38429 201 aa11.19□□□□□ -0.62
RER1YCL001W BCK2P33306 851 aa11.16□□□□□ -0.62
RER1YCL001W YDL129WQ07555 291 aa11.15□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms