RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W YPL260WQ08977 551 aa9.76□□□□□ -0.85
SFL1YOR140W YOR111WQ99210 232 aa9.76□□□□□ -0.85
SFL1YOR140W GAP1P19145 602 aaPredicted RBP9.76□□□□□ -0.85
SFL1YOR140W ACE2P21192 770 aa9.76□□□□□ -0.85
SFL1YOR140W RSM25P40496 264 aa9.76□□□□□ -0.85
SFL1YOR140W DIT2P21595 489 aa9.75□□□□□ -0.85
SFL1YOR140W KEL3Q08979 651 aaPredicted RBP9.75□□□□□ -0.85
SFL1YOR140W MAK31P23059 88 aa9.74□□□□□ -0.85
SFL1YOR140W MSH4P40965 878 aaPredicted RBP9.74□□□□□ -0.85
SFL1YOR140W DCS2Q12123 353 aa9.74□□□□□ -0.85
SFL1YOR140W RRG1Q12167 365 aaPredicted RBP9.74□□□□□ -0.85
SFL1YOR140W STV1P37296 890 aa9.74□□□□□ -0.85
SFL1YOR140W UBP10P53874 792 aaPredicted RBP9.74□□□□□ -0.85
SFL1YOR140W TFC8Q12308 588 aa9.74□□□□□ -0.85
SFL1YOR140W RAD61Q99359 647 aa9.74□□□□□ -0.85
SFL1YOR140W PIL1P53252 339 aaKnown RBP9.73□□□□□ -0.85
SFL1YOR140W GIN4Q12263 1142 aa9.73□□□□□ -0.85
SFL1YOR140W MPH3P0CE00 602 aa9.73□□□□□ -0.85
SFL1YOR140W MCM4P30665 933 aaKnown RBP9.73□□□□□ -0.85
SFL1YOR140W SUB1P54000 292 aaKnown RBP9.73□□□□□ -0.85
SFL1YOR140W LCD1Q04377 747 aa9.73□□□□□ -0.85
SFL1YOR140W GPA1P08539 472 aa9.72□□□□□ -0.85
SFL1YOR140W PCI8P40512 444 aa9.72□□□□□ -0.85
SFL1YOR140W MYO5Q04439 1219 aaKnown RBP9.72□□□□□ -0.85
SFL1YOR140W DDP1Q99321 188 aaKnown RBP9.72□□□□□ -0.85
SFL1YOR140W SSA1P10591 642 aaKnown RBP9.72□□□□□ -0.85
SFL1YOR140W NPR3P38742 1146 aa9.72□□□□□ -0.85
SFL1YOR140W YER130CP39959 443 aa9.72□□□□□ -0.85
SFL1YOR140W VPS4P52917 437 aa9.72□□□□□ -0.85
SFL1YOR140W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.71□□□□□ -0.85not detected
SFL1YOR140W RGP1P16664 663 aa9.71□□□□□ -0.86
SFL1YOR140W CBP3P21560 335 aa9.71□□□□□ -0.86
SFL1YOR140W BMH2P34730 273 aaKnown RBP9.71□□□□□ -0.86
SFL1YOR140W FYV10P40492 516 aa9.71□□□□□ -0.86
SFL1YOR140W MTC3P53077 123 aa9.71□□□□□ -0.86
SFL1YOR140W STI1P15705 589 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
SFL1YOR140W ACK1Q07622 623 aaPredicted RBP9.7□□□□□ -0.86
SFL1YOR140W NHA1Q99271 985 aa9.7□□□□□ -0.86
SFL1YOR140W MET6P05694 767 aaKnown RBP9.7□□□□□ -0.86
SFL1YOR140W CHS3P29465 1165 aa9.7□□□□□ -0.86
SFL1YOR140W MAL31P38156 614 aa9.7□□□□□ -0.86
SFL1YOR140W RXT2P38255 430 aa9.7□□□□□ -0.86
SFL1YOR140W SHC1P39000 512 aa9.7□□□□□ -0.86
SFL1YOR140W VPS8P39702 1274 aa9.7□□□□□ -0.86
SFL1YOR140W YJL171CP46992 396 aa9.7□□□□□ -0.86
SFL1YOR140W RPT6Q01939 405 aaKnown RBP9.7□□□□□ -0.86
SFL1YOR140W SGD1Q06132 899 aa9.7□□□□□ -0.86
SFL1YOR140W PGI1P12709 554 aaKnown RBP9.69□□□□□ -0.86
SFL1YOR140W URA1P28272 314 aaPredicted RBP9.69□□□□□ -0.86
SFL1YOR140W UTP7P40055 554 aaKnown RBP9.69□□□□□ -0.86
SFL1YOR140W GIS4Q04233 774 aa9.69□□□□□ -0.86
SFL1YOR140W MYO1P08964 1928 aa9.69□□□□□ -0.86
SFL1YOR140W HXK1P04806 485 aaKnown RBP9.68□□□□□ -0.86
SFL1YOR140W SRP54P20424 541 aaKnown RBP9.68□□□□□ -0.86
SFL1YOR140W RNR3P21672 869 aaKnown RBP9.68□□□□□ -0.86
SFL1YOR140W TRM44Q02648 567 aaKnown RBP9.68□□□□□ -0.86
SFL1YOR140W TLG1Q03322 224 aa9.68□□□□□ -0.86
SFL1YOR140W GET3Q12154 354 aaKnown RBP9.68□□□□□ -0.86
SFL1YOR140W TOM1Q03280 3268 aa9.68□□□□□ -0.86
SFL1YOR140W MCM2P29469 868 aa9.68□□□□□ -0.86
SFL1YOR140W SRP40P32583 406 aaPredicted RBP9.68□□□□□ -0.86
SFL1YOR140W SWE1P32944 819 aa9.68□□□□□ -0.86
SFL1YOR140W PTC5Q12511 572 aa9.67□□□□□ -0.86
SFL1YOR140W ATE1P16639 503 aa9.67□□□□□ -0.86
SFL1YOR140W SQS1P53866 767 aaKnown RBP9.67□□□□□ -0.86
SFL1YOR140W EIS1Q05050 843 aaKnown RBP9.67□□□□□ -0.86
SFL1YOR140W ATG20Q07528 640 aa9.67□□□□□ -0.86
SFL1YOR140W ETT1Q08421 412 aaKnown RBP9.67□□□□□ -0.86
SFL1YOR140W PRE8P23639 250 aa9.66□□□□□ -0.86
SFL1YOR140W RPL8BP29453 256 aaKnown RBP9.66□□□□□ -0.86
SFL1YOR140W YPT11P48559 417 aa9.66□□□□□ -0.86
SFL1YOR140W SEN54Q02825 467 aaPredicted RBP9.66□□□□□ -0.86
SFL1YOR140W CSC1Q06538 782 aa9.66□□□□□ -0.86
SFL1YOR140W SRM1P21827 482 aa9.66□□□□□ -0.86
SFL1YOR140W SPB4P25808 606 aaPredicted RBP9.66□□□□□ -0.86
SFL1YOR140W YDR341CQ05506 607 aaKnown RBP9.66□□□□□ -0.86
SFL1YOR140W MRPL10P36520 322 aa9.65□□□□□ -0.86
SFL1YOR140W LYS14P40971 790 aa9.65□□□□□ -0.86
SFL1YOR140W VPS30Q02948 557 aa9.65□□□□□ -0.86
SFL1YOR140W YDL124WQ07551 312 aaKnown RBP9.65□□□□□ -0.86
SFL1YOR140W SAM2P19358 384 aaKnown RBP9.65□□□□□ -0.87
SFL1YOR140W RFT1P38206 574 aaPredicted RBP9.65□□□□□ -0.87
SFL1YOR140W DOS2P54858 310 aa9.65□□□□□ -0.87
SFL1YOR140W PCL8Q08966 492 aa9.65□□□□□ -0.87
SFL1YOR140W MSM1P22438 575 aa9.64□□□□□ -0.87
SFL1YOR140W ADP1P25371 1049 aa9.64□□□□□ -0.87
SFL1YOR140W ALG2P43636 503 aa9.64□□□□□ -0.87
SFL1YOR140W GDE1Q02979 1223 aa9.64□□□□□ -0.87
SFL1YOR140W SUE1Q06524 206 aa9.64□□□□□ -0.87
SFL1YOR140W DSE3Q08729 430 aa9.64□□□□□ -0.87
SFL1YOR140W YBL028CP38202 106 aa9.64□□□□□ -0.87
SFL1YOR140W FOL1P53848 824 aa9.64□□□□□ -0.87
SFL1YOR140W SKG3Q06315 1026 aa9.64□□□□□ -0.87
SFL1YOR140W CIT1P00890 479 aa9.63□□□□□ -0.87
SFL1YOR140W HPR1P17629 752 aaKnown RBP9.63□□□□□ -0.87
SFL1YOR140W GSY2P27472 705 aa9.63□□□□□ -0.87
SFL1YOR140W MIC60P36112 540 aa9.63□□□□□ -0.87
SFL1YOR140W NOC2P39744 710 aaKnown RBP9.63□□□□□ -0.87
SFL1YOR140W YGL138CP53122 345 aa9.63□□□□□ -0.87
SFL1YOR140W TUB2P02557 457 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms