RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W SGS1P35187 1447 aa15.49■□□□□ 0.07
SFL1YOR140W INO80P53115 1489 aa15.08■□□□□ 0
SFL1YOR140W TCB3Q03640 1545 aaKnown RBP14.97□□□□□ -0.01
SFL1YOR140W MON2P48563 1636 aaPredicted RBP14.92□□□□□ -0.02
SFL1YOR140W TY1B-DR4Q07793 1604 aa14.9□□□□□ -0.02
SFL1YOR140W SSN2P38931 1420 aa14.73□□□□□ -0.05
SFL1YOR140W SPA2P23201 1466 aaKnown RBP14.66□□□□□ -0.06
SFL1YOR140W SWR1Q05471 1514 aa14.62□□□□□ -0.07
SFL1YOR140W HSL1P34244 1518 aa14.6□□□□□ -0.07
SFL1YOR140W SPT6P23615 1451 aaKnown RBP14.53□□□□□ -0.08
SFL1YOR140W HIR3P47171 1648 aa14.34□□□□□ -0.11
SFL1YOR140W DNA2P38859 1522 aa14.26□□□□□ -0.13
SFL1YOR140W DRS1P32892 752 aaKnown RBP14.25□□□□□ -0.13
SFL1YOR140W XRN1P22147 1528 aaKnown RBP14.23□□□□□ -0.13
SFL1YOR140W KOG1P38873 1557 aa14.09□□□□□ -0.15
SFL1YOR140W REV3P14284 1504 aa14□□□□□ -0.17
SFL1YOR140W TAF2P23255 1407 aa13.91□□□□□ -0.18
SFL1YOR140W ECM5Q03214 1411 aa13.86□□□□□ -0.19
SFL1YOR140W SIN3P22579 1536 aa13.84□□□□□ -0.19
SFL1YOR140W BUD4P47136 1447 aa13.82□□□□□ -0.2
SFL1YOR140W THO2P53552 1597 aaKnown RBP13.81□□□□□ -0.2
SFL1YOR140W SSK2P53599 1579 aa13.81□□□□□ -0.2
SFL1YOR140W ATG2P53855 1592 aa13.73□□□□□ -0.21
SFL1YOR140W ESP1Q03018 1630 aa13.72□□□□□ -0.21
SFL1YOR140W SKI3P17883 1432 aaKnown RBP13.64□□□□□ -0.23
SFL1YOR140W PEP1P32319 1579 aa13.62□□□□□ -0.23
SFL1YOR140W MDS3P53094 1487 aa13.61□□□□□ -0.23
SFL1YOR140W MYO2P19524 1574 aaKnown RBP13.56□□□□□ -0.24
SFL1YOR140W YPK9Q12697 1472 aa13.46□□□□□ -0.26
SFL1YOR140W SCC2Q04002 1493 aa13.39□□□□□ -0.27
SFL1YOR140W POL1P13382 1468 aa13.37□□□□□ -0.27
SFL1YOR140W STU1P38198 1513 aa13.36□□□□□ -0.27
SFL1YOR140W UFD4P33202 1483 aa13.32□□□□□ -0.28
SFL1YOR140W RPO31P04051 1460 aa13.3□□□□□ -0.28
SFL1YOR140W RKR1Q04781 1562 aa13.28□□□□□ -0.28
SFL1YOR140W TY2B-LR1P0C2J3 1770 aa13.26□□□□□ -0.29
SFL1YOR140W TY2B-FP0CX63 1770 aa13.26□□□□□ -0.29
SFL1YOR140W TY2B-GR2P0CX64 1770 aa13.26□□□□□ -0.29
SFL1YOR140W TY2B-CP25384 1770 aa13.26□□□□□ -0.29
SFL1YOR140W TY2B-DR2Q03494 1770 aa13.26□□□□□ -0.29
SFL1YOR140W TY1B-DR1Q03855 1755 aa13.26□□□□□ -0.29
SFL1YOR140W TY2B-DR3Q07791 1770 aaKnown RBP13.26□□□□□ -0.29
SFL1YOR140W TY2B-OR1Q12113 1770 aa13.26□□□□□ -0.29
SFL1YOR140W TY2B-DR1Q12472 1770 aa13.26□□□□□ -0.29
SFL1YOR140W TY2B-OR2Q12501 1770 aa13.26□□□□□ -0.29
SFL1YOR140W BPT1P14772 1559 aa13.25□□□□□ -0.29
SFL1YOR140W RQC2Q12532 1038 aaKnown RBP13.22□□□□□ -0.29
SFL1YOR140W YCF1P39109 1515 aaKnown RBP13.21□□□□□ -0.29
SFL1YOR140W YOR1P53049 1477 aa13.18□□□□□ -0.3
SFL1YOR140W TOP2P06786 1428 aaKnown RBP13.18□□□□□ -0.3
SFL1YOR140W TY1B-DR3Q99231 1755 aa13.18□□□□□ -0.3
SFL1YOR140W RSE1Q04693 1361 aaKnown RBP13.17□□□□□ -0.3
SFL1YOR140W MMS22Q06164 1454 aa13.14□□□□□ -0.31
SFL1YOR140W TY2B-BQ12491 1770 aa13.13□□□□□ -0.31
SFL1YOR140W YTA7P40340 1379 aa13.11□□□□□ -0.31
SFL1YOR140W CHD1P32657 1468 aa13.1□□□□□ -0.31
SFL1YOR140W SMC4Q12267 1418 aa13.08□□□□□ -0.32
SFL1YOR140W TY1B-BRQ12193 1756 aa13.07□□□□□ -0.32
SFL1YOR140W TY1B-GR3Q12316 1755 aa13.07□□□□□ -0.32
SFL1YOR140W TY1B-ORQ92393 1755 aa13.07□□□□□ -0.32
SFL1YOR140W SAS10Q12136 610 aaPredicted RBP13.05□□□□□ -0.32
SFL1YOR140W TY1B-HO13535 1793 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-DR5P0C2I2 1755 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-DR6P0C2I3 1755 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-LR2P0C2I5 1755 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-LR3P0C2I6 1755 aaKnown RBP13.03□□□□□ -0.32
SFL1YOR140W TY1B-PR1P0C2I9 1755 aaKnown RBP13.03□□□□□ -0.32
SFL1YOR140W TY1B-PR2P0C2J0 1756 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-PR3P0C2J1 1755 aaKnown RBP13.03□□□□□ -0.32
SFL1YOR140W TY1B-JR1P47098 1755 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-ML2Q03434 1755 aaKnown RBP13.03□□□□□ -0.32
SFL1YOR140W TY1B-ER1Q03612 1755 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-ML1Q04711 1755 aaKnown RBP13.03□□□□□ -0.32
SFL1YOR140W TY1B-GR2Q12269 1755 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-OLQ12273 1755 aa13.03□□□□□ -0.32
SFL1YOR140W TY1B-PLQ12414 1755 aaKnown RBP13.03□□□□□ -0.32
SFL1YOR140W MYO4P32492 1471 aa12.99□□□□□ -0.33
SFL1YOR140W MTC1P47018 478 aaKnown RBP12.96□□□□□ -0.34
SFL1YOR140W CDC25P04821 1589 aa12.95□□□□□ -0.34
SFL1YOR140W SPP41P38904 1435 aa12.9□□□□□ -0.34
SFL1YOR140W SNQ2P32568 1501 aaKnown RBP12.89□□□□□ -0.35
SFL1YOR140W PAN1P32521 1480 aa12.86□□□□□ -0.35
SFL1YOR140W STH1P32597 1359 aa12.86□□□□□ -0.35
SFL1YOR140W ESC1Q03661 1658 aaKnown RBP12.85□□□□□ -0.35
SFL1YOR140W DNF1P32660 1571 aa12.83□□□□□ -0.36
SFL1YOR140W TY1B-JR2P47100 1755 aaKnown RBP12.82□□□□□ -0.36
SFL1YOR140W TY1B-ER2Q03619 1755 aa12.82□□□□□ -0.36
SFL1YOR140W TY1B-MR1Q04214 1755 aa12.82□□□□□ -0.36
SFL1YOR140W TY1B-MR2Q04670 1755 aaKnown RBP12.82□□□□□ -0.36
SFL1YOR140W TY1B-LR1Q12088 1755 aaKnown RBP12.82□□□□□ -0.36
SFL1YOR140W TY1B-NL1Q12112 1755 aa12.82□□□□□ -0.36
SFL1YOR140W TY1B-GR1Q12141 1755 aa12.82□□□□□ -0.36
SFL1YOR140W TY1B-BLQ12490 1755 aa12.82□□□□□ -0.36
SFL1YOR140W MLP2P40457 1679 aa12.82□□□□□ -0.36
SFL1YOR140W TSC11P40061 1430 aa12.81□□□□□ -0.36
SFL1YOR140W VTH1P40438 1549 aa12.81□□□□□ -0.36
SFL1YOR140W VTH2P40890 1549 aa12.81□□□□□ -0.36
SFL1YOR140W PDR15Q04182 1529 aaKnown RBP12.77□□□□□ -0.36
SFL1YOR140W RPA190P10964 1664 aaKnown RBP12.77□□□□□ -0.37
SFL1YOR140W ULS1Q08562 1619 aa12.76□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms