RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C CFT2Q12102 859 aaPredicted RBP5.39□□□□□ -1.55
SWI3YJL176C SAM2P19358 384 aaKnown RBP5.39□□□□□ -1.55
SWI3YJL176C ALG2P43636 503 aa5.39□□□□□ -1.55
SWI3YJL176C YJL007CP47080 104 aa5.39□□□□□ -1.55
SWI3YJL176C RPT6Q01939 405 aaKnown RBP5.39□□□□□ -1.55
SWI3YJL176C VPS30Q02948 557 aa5.39□□□□□ -1.55
SWI3YJL176C TFC6Q06339 672 aa5.39□□□□□ -1.55
SWI3YJL176C MAK31P23059 88 aa5.38□□□□□ -1.55
SWI3YJL176C CDC60P26637 1090 aaKnown RBP5.38□□□□□ -1.55
SWI3YJL176C RPL8BP29453 256 aaKnown RBP5.38□□□□□ -1.55
SWI3YJL176C IXR1P33417 597 aa5.38□□□□□ -1.55
SWI3YJL176C VPS45P38932 577 aa5.38□□□□□ -1.55
SWI3YJL176C UBP9P39967 754 aa5.38□□□□□ -1.55
SWI3YJL176C AIM9P40053 627 aaKnown RBP5.38□□□□□ -1.55
SWI3YJL176C HDA1P53973 706 aa5.38□□□□□ -1.55
SWI3YJL176C MYO5Q04439 1219 aaKnown RBP5.38□□□□□ -1.55
SWI3YJL176C YLR225CQ05948 407 aaKnown RBP5.38□□□□□ -1.55
SWI3YJL176C SGD1Q06132 899 aa5.38□□□□□ -1.55
SWI3YJL176C PTK2P47116 818 aaKnown RBP5.38□□□□□ -1.55
SWI3YJL176C UBX5Q06682 500 aa5.38□□□□□ -1.55
SWI3YJL176C TY3A-GQ12173 290 aa5.38□□□□□ -1.55
SWI3YJL176C TY3A-IQ99219 290 aa5.38□□□□□ -1.55
SWI3YJL176C NUC1P08466 329 aa5.37□□□□□ -1.55
SWI3YJL176C CSM2P40465 213 aa5.37□□□□□ -1.55
SWI3YJL176C SRS2P12954 1174 aa5.37□□□□□ -1.55
SWI3YJL176C SEC20P28791 383 aa5.37□□□□□ -1.55
SWI3YJL176C TRL1P09880 827 aaKnown RBP5.36□□□□□ -1.55
SWI3YJL176C RNR2P09938 399 aaKnown RBP5.36□□□□□ -1.55
SWI3YJL176C VMA2P16140 517 aaKnown RBP5.36□□□□□ -1.55
SWI3YJL176C DIT2P21595 489 aa5.36□□□□□ -1.55
SWI3YJL176C YKR018CP36114 725 aa5.36□□□□□ -1.55
SWI3YJL176C YAF9P53930 226 aa5.36□□□□□ -1.55
SWI3YJL176C ARP5P53946 755 aa5.36□□□□□ -1.55
SWI3YJL176C RAD18P10862 487 aa5.36□□□□□ -1.55
SWI3YJL176C PKC1P24583 1151 aa5.36□□□□□ -1.55
SWI3YJL176C MAL31P38156 614 aa5.36□□□□□ -1.55
SWI3YJL176C ATG1P53104 897 aa5.36□□□□□ -1.55
SWI3YJL176C ALD6P54115 500 aaKnown RBP5.36□□□□□ -1.55
SWI3YJL176C ECM23Q02710 187 aa5.36□□□□□ -1.55
SWI3YJL176C RNR3P21672 869 aaKnown RBP5.35□□□□□ -1.55
SWI3YJL176C EUG1P32474 517 aa5.35□□□□□ -1.55
SWI3YJL176C FBP26P32604 452 aa5.35□□□□□ -1.55
SWI3YJL176C GPB2P39717 880 aa5.35□□□□□ -1.55
SWI3YJL176C VID28P40547 921 aa5.35□□□□□ -1.55
SWI3YJL176C YKE2P52553 114 aa5.35□□□□□ -1.55
SWI3YJL176C LSB1P53281 241 aa5.35□□□□□ -1.55
SWI3YJL176C YOR111WQ99210 232 aa5.35□□□□□ -1.55
SWI3YJL176C SRP54P20424 541 aaKnown RBP5.35□□□□□ -1.55
SWI3YJL176C PHO88P38264 188 aaPredicted RBP5.35□□□□□ -1.55
SWI3YJL176C AKR1P39010 764 aa5.35□□□□□ -1.55
SWI3YJL176C MDM1Q01846 1127 aa5.35□□□□□ -1.55
SWI3YJL176C TOM71P38825 639 aaKnown RBP5.34□□□□□ -1.55
SWI3YJL176C UTP4Q06679 776 aaKnown RBP5.34□□□□□ -1.55
SWI3YJL176C DSE3Q08729 430 aa5.34□□□□□ -1.55
SWI3YJL176C CDC19P00549 500 aaKnown RBP5.34□□□□□ -1.56
SWI3YJL176C MATALPHA2P0CY08 210 aa5.34□□□□□ -1.56
SWI3YJL176C HMLALPHA2P0CY09 210 aa5.34□□□□□ -1.56
SWI3YJL176C SAM1P10659 382 aaKnown RBP5.34□□□□□ -1.56
SWI3YJL176C TPM2P40414 161 aa5.34□□□□□ -1.56
SWI3YJL176C SUE1Q06524 206 aa5.34□□□□□ -1.56
SWI3YJL176C ISW2Q08773 1120 aa5.34□□□□□ -1.56
SWI3YJL176C TSR3Q12094 313 aaKnown RBP5.34□□□□□ -1.56
SWI3YJL176C CIT1P00890 479 aa5.33□□□□□ -1.56
SWI3YJL176C UTR4P32626 227 aa5.33□□□□□ -1.56
SWI3YJL176C TGL1P34163 548 aa5.33□□□□□ -1.56
SWI3YJL176C OPY1P38271 328 aa5.33□□□□□ -1.56
SWI3YJL176C YGR125WP53273 1036 aa5.33□□□□□ -1.56
SWI3YJL176C UBP10P53874 792 aaPredicted RBP5.33□□□□□ -1.56
SWI3YJL176C YDR341CQ05506 607 aaKnown RBP5.33□□□□□ -1.56
SWI3YJL176C CSC1Q06538 782 aa5.33□□□□□ -1.56
SWI3YJL176C VIP1Q06685 1146 aaKnown RBP5.33□□□□□ -1.56
SWI3YJL176C BMH2P34730 273 aaKnown RBP5.33□□□□□ -1.56
SWI3YJL176C EPL1P43572 832 aa5.33□□□□□ -1.56
SWI3YJL176C TMA64Q04600 565 aaKnown RBP5.33□□□□□ -1.56
SWI3YJL176C SPH1Q06160 661 aa5.33□□□□□ -1.56
SWI3YJL176C RPL8AP17076 256 aaKnown RBP5.32□□□□□ -1.56
SWI3YJL176C PWP2P25635 923 aaKnown RBP5.32□□□□□ -1.56
SWI3YJL176C PSF2P40359 213 aa5.32□□□□□ -1.56
SWI3YJL176C MET6P05694 767 aaKnown RBP5.32□□□□□ -1.56
SWI3YJL176C YHL017WP38745 532 aa5.32□□□□□ -1.56
SWI3YJL176C MXR1P40029 184 aa5.32□□□□□ -1.56
SWI3YJL176C FMS1P50264 508 aa5.32□□□□□ -1.56
SWI3YJL176C GDE1Q02979 1223 aa5.32□□□□□ -1.56
SWI3YJL176C DUS4Q06063 367 aa5.32□□□□□ -1.56
SWI3YJL176C GUD1Q07729 489 aa5.32□□□□□ -1.56
SWI3YJL176C MET7Q08645 548 aa5.32□□□□□ -1.56
SWI3YJL176C RLF2Q12495 606 aa5.32□□□□□ -1.56
SWI3YJL176C HCA4P20448 770 aaKnown RBP5.31□□□□□ -1.56
SWI3YJL176C SWI4P25302 1093 aaKnown RBP5.31□□□□□ -1.56
SWI3YJL176C SRP40P32583 406 aaPredicted RBP5.31□□□□□ -1.56
SWI3YJL176C RXT2P38255 430 aa5.31□□□□□ -1.56
SWI3YJL176C RPN10P38886 268 aaKnown RBP5.31□□□□□ -1.56
SWI3YJL176C YIR014WP40570 242 aa5.31□□□□□ -1.56
SWI3YJL176C PSK2Q08217 1101 aa5.31□□□□□ -1.56
SWI3YJL176C ICL2Q12031 575 aa5.31□□□□□ -1.56
SWI3YJL176C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SWI3YJL176C RKM4Q12504 494 aa5.31□□□□□ -1.56
SWI3YJL176C MAK11P20484 414 aaKnown RBP5.31□□□□□ -1.56
SWI3YJL176C PRE10P21242 288 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SWI3YJL176C SDH2P21801 266 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms