RNA–Protein interactions for RNA: YGL240W

DOC1, Transcript of Processivity factor, yeastyeast

Gene DOC1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOC1YGL240W SUB2Q07478 446 aaKnown RBP8.66□□□□□ -1.02
DOC1YGL240W YDR461C-AQ2V2P7 80 aa8.66□□□□□ -1.02
DOC1YGL240W RAD50P12753 1312 aa8.65□□□□□ -1.02
DOC1YGL240W VAS1P07806 1104 aaKnown RBP8.65□□□□□ -1.02
DOC1YGL240W MIP1P15801 1254 aa8.65□□□□□ -1.02
DOC1YGL240W SRM1P21827 482 aa8.65□□□□□ -1.02
DOC1YGL240W PKC1P24583 1151 aa8.65□□□□□ -1.02
DOC1YGL240W DBP1P24784 617 aaKnown RBP8.65□□□□□ -1.02
DOC1YGL240W VID27P40157 782 aa8.65□□□□□ -1.02
DOC1YGL240W SNU71P53207 620 aaKnown RBP8.65□□□□□ -1.02
DOC1YGL240W MET7Q08645 548 aa8.65□□□□□ -1.02
DOC1YGL240W ERG12P07277 443 aa8.64□□□□□ -1.03
DOC1YGL240W MPH3P0CE00 602 aa8.64□□□□□ -1.03
DOC1YGL240W WHI3P34761 661 aaKnown RBP8.64□□□□□ -1.03
DOC1YGL240W MET1P36150 593 aa8.64□□□□□ -1.03
DOC1YGL240W AAP1P37898 856 aaKnown RBP8.64□□□□□ -1.03
DOC1YGL240W SLN1P39928 1220 aaPredicted RBP8.64□□□□□ -1.03
DOC1YGL240W MXR1P40029 184 aa8.64□□□□□ -1.03
DOC1YGL240W AIM21P40563 679 aa8.64□□□□□ -1.03
DOC1YGL240W MRD1Q06106 887 aaKnown RBP8.64□□□□□ -1.03
DOC1YGL240W RAD61Q99359 647 aa8.64□□□□□ -1.03
DOC1YGL240W DIT2P21595 489 aa8.63□□□□□ -1.03
DOC1YGL240W PER1P25625 357 aa8.63□□□□□ -1.03
DOC1YGL240W KSP1P38691 1029 aaKnown RBP8.63□□□□□ -1.03
DOC1YGL240W SKG3Q06315 1026 aa8.63□□□□□ -1.03
DOC1YGL240W CHS3P29465 1165 aa8.62□□□□□ -1.03
DOC1YGL240W RRP8P38961 392 aaKnown RBP8.62□□□□□ -1.03
DOC1YGL240W SCS3P53012 380 aa8.62□□□□□ -1.03
DOC1YGL240W RPS15Q01855 142 aaKnown RBP8.62□□□□□ -1.03
DOC1YGL240W SAM2P19358 384 aaKnown RBP8.61□□□□□ -1.03
DOC1YGL240W ACE2P21192 770 aa8.61□□□□□ -1.03
DOC1YGL240W PRO3P32263 286 aaKnown RBP8.61□□□□□ -1.03
DOC1YGL240W SRP40P32583 406 aaPredicted RBP8.61□□□□□ -1.03
DOC1YGL240W UTR4P32626 227 aa8.61□□□□□ -1.03
DOC1YGL240W BRN1P38170 754 aa8.61□□□□□ -1.03
DOC1YGL240W UFD2P54860 961 aa8.61□□□□□ -1.03
DOC1YGL240W FPR4Q06205 392 aaPredicted RBP8.61□□□□□ -1.03
DOC1YGL240W YFL040WP43562 540 aa8.6□□□□□ -1.03
DOC1YGL240W HDA1P53973 706 aa8.6□□□□□ -1.03
DOC1YGL240W SAM1P10659 382 aaKnown RBP8.59□□□□□ -1.03
DOC1YGL240W MYO3P36006 1272 aa8.59□□□□□ -1.03
DOC1YGL240W YGL039WP53183 348 aaKnown RBP8.59□□□□□ -1.03
DOC1YGL240W HXT17P53631 564 aa8.59□□□□□ -1.03
DOC1YGL240W ANP1P32629 500 aa8.58□□□□□ -1.04
DOC1YGL240W RGT1P32862 1170 aa8.58□□□□□ -1.04
DOC1YGL240W SHP1P34223 423 aa8.58□□□□□ -1.04
DOC1YGL240W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
DOC1YGL240W VPS8P39702 1274 aa8.58□□□□□ -1.04
DOC1YGL240W GPB2P39717 880 aa8.58□□□□□ -1.04
DOC1YGL240W SKP2P42843 763 aa8.58□□□□□ -1.04
DOC1YGL240W PTK2P47116 818 aaKnown RBP8.58□□□□□ -1.04
DOC1YGL240W SLD5Q03406 294 aa8.58□□□□□ -1.04
DOC1YGL240W SPN1Q06505 410 aaPredicted RBP8.58□□□□□ -1.04
DOC1YGL240W SSF2Q12153 453 aaPredicted RBP8.58□□□□□ -1.04
DOC1YGL240W PGA3Q12746 312 aaKnown RBP8.58□□□□□ -1.04
DOC1YGL240W YDR524C-BQ3E6R4 66 aa8.58□□□□□ -1.04
DOC1YGL240W TUS1Q06412 1307 aa8.57□□□□□ -1.04
DOC1YGL240W RIT1P23796 513 aa8.57□□□□□ -1.04
DOC1YGL240W AVT3P36062 692 aa8.57□□□□□ -1.04
DOC1YGL240W YHR131CP38835 850 aa8.57□□□□□ -1.04
DOC1YGL240W HXT13P39924 564 aa8.57□□□□□ -1.04
DOC1YGL240W GCR2Q01722 534 aa8.57□□□□□ -1.04
DOC1YGL240W FMP30Q02883 468 aa8.57□□□□□ -1.04
DOC1YGL240W RAD18P10862 487 aa8.56□□□□□ -1.04
DOC1YGL240W YUR1P26725 428 aa8.56□□□□□ -1.04
DOC1YGL240W RER2P35196 286 aa8.56□□□□□ -1.04
DOC1YGL240W CIC1P38779 376 aaKnown RBP8.56□□□□□ -1.04
DOC1YGL240W CRG1P38892 291 aaRIP-Chip data8.56□□□□□ -1.04not detected
DOC1YGL240W NOC2P39744 710 aaKnown RBP8.56□□□□□ -1.04
DOC1YGL240W MSC6Q08818 692 aaKnown RBP8.56□□□□□ -1.04
DOC1YGL240W IMP2'P32351 346 aa8.55□□□□□ -1.04
DOC1YGL240W UBP9P39967 754 aa8.55□□□□□ -1.04
DOC1YGL240W FOL1P53848 824 aa8.55□□□□□ -1.04
DOC1YGL240W ALD6P54115 500 aaKnown RBP8.55□□□□□ -1.04
DOC1YGL240W PDC1P06169 563 aaKnown RBP8.54□□□□□ -1.04
DOC1YGL240W SOL4P53315 255 aa8.54□□□□□ -1.04
DOC1YGL240W TMA64Q04600 565 aaKnown RBP8.54□□□□□ -1.04
DOC1YGL240W CDC19P00549 500 aaKnown RBP8.53□□□□□ -1.04
DOC1YGL240W TOM71P38825 639 aaKnown RBP8.53□□□□□ -1.04
DOC1YGL240W RPT6Q01939 405 aaKnown RBP8.53□□□□□ -1.04
DOC1YGL240W VPS30Q02948 557 aa8.53□□□□□ -1.04
DOC1YGL240W MYO5Q04439 1219 aaKnown RBP8.53□□□□□ -1.04
DOC1YGL240W NUC1P08466 329 aa8.52□□□□□ -1.05
DOC1YGL240W MAK31P23059 88 aa8.52□□□□□ -1.05
DOC1YGL240W CAD1P24813 409 aaKnown RBP8.52□□□□□ -1.05
DOC1YGL240W PEP3P27801 918 aa8.52□□□□□ -1.05
DOC1YGL240W RPL8BP29453 256 aaKnown RBP8.52□□□□□ -1.05
DOC1YGL240W GRS1P38088 690 aaKnown RBP8.52□□□□□ -1.05
DOC1YGL240W VPS29P38759 282 aa8.52□□□□□ -1.05
DOC1YGL240W CSM2P40465 213 aa8.52□□□□□ -1.05
DOC1YGL240W DUS3Q06053 668 aaKnown RBP8.52□□□□□ -1.05
DOC1YGL240W TFC6Q06339 672 aa8.52□□□□□ -1.05
DOC1YGL240W SUE1Q06524 206 aa8.52□□□□□ -1.05
DOC1YGL240W ERP3Q12403 225 aa8.52□□□□□ -1.05
DOC1YGL240W TGL1P34163 548 aa8.51□□□□□ -1.05
DOC1YGL240W MSC7P38694 644 aa8.51□□□□□ -1.05
DOC1YGL240W YGR125WP53273 1036 aa8.51□□□□□ -1.05
DOC1YGL240W YAF9P53930 226 aa8.51□□□□□ -1.05
DOC1YGL240W DAK1P54838 584 aaKnown RBP8.51□□□□□ -1.05
DOC1YGL240W ESF1Q06344 628 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms