Protein–RNA interactions for Protein: Q03406

SLD5, DNA replication complex GINS protein SLD5, yeastyeast

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLD5Q03406 YML009W-BYML009W-B 477 nt23.07■■□□□ 1.28
SLD5Q03406 NSR1YGR159C 1245 nt22.64■■□□□ 1.21
SLD5Q03406 NOP1YDL014W 984 nt22.6■■□□□ 1.21
SLD5Q03406 YKL036CYKL036C 393 nt21.24■□□□□ 0.99
SLD5Q03406 Q0297Q0297 156 nt19.95■□□□□ 0.78
SLD5Q03406 YJL027CYJL027C 417 nt19.87■□□□□ 0.77
SLD5Q03406 SRX1YKL086W 384 nt19.78■□□□□ 0.76
SLD5Q03406 MDJ1YFL016C 1536 nt19.71■□□□□ 0.75
SLD5Q03406 SCS3YGL126W 1143 nt19.52■□□□□ 0.72
SLD5Q03406 YCR051WYCR051W 669 nt18.76■□□□□ 0.59
SLD5Q03406 YOL085CYOL085C 342 nt18.4■□□□□ 0.54
SLD5Q03406 PKP1YIL042C 1185 nt18.04■□□□□ 0.48
SLD5Q03406 RPP1BYDL130W 321 nt17.89■□□□□ 0.45
SLD5Q03406 SCJ1YMR214W 1134 nt17.81■□□□□ 0.44
SLD5Q03406 TRN1tP(UGG)A 72 nt17.65■□□□□ 0.42
SLD5Q03406 SUF9tP(UGG)F 72 nt17.65■□□□□ 0.42
SLD5Q03406 SUF8tP(UGG)H 72 nt17.65■□□□□ 0.42
SLD5Q03406 tP(UGG)LtP(UGG)L 72 nt17.65■□□□□ 0.42
SLD5Q03406 SUF7tP(UGG)M 72 nt17.65■□□□□ 0.42
SLD5Q03406 tP(UGG)N1tP(UGG)N1 72 nt17.65■□□□□ 0.42
SLD5Q03406 tP(UGG)N2tP(UGG)N2 72 nt17.65■□□□□ 0.42
SLD5Q03406 tP(UGG)O1tP(UGG)O1 72 nt17.65■□□□□ 0.42
SLD5Q03406 SUF11tP(UGG)O2 72 nt17.65■□□□□ 0.42
SLD5Q03406 DBP2YNL112W 1641 nt17.63■□□□□ 0.41
SLD5Q03406 ATS1YAL020C 1002 nt17.59■□□□□ 0.41
SLD5Q03406 CCC1YLR220W 969 nt17.44■□□□□ 0.38
SLD5Q03406 PET122YER153C 765 nt17.04■□□□□ 0.32
SLD5Q03406 SCR1SCR1 522 nt16.93■□□□□ 0.3
SLD5Q03406 tP(UGG)O3tP(UGG)O3 72 nt16.83■□□□□ 0.28
SLD5Q03406 YBR190WYBR190W 312 nt16.72■□□□□ 0.27
SLD5Q03406 RVS167YDR388W 1449 nt16.61■□□□□ 0.25
SLD5Q03406 RRN5YLR141W 1092 nt16.6■□□□□ 0.25
SLD5Q03406 RSB1YOR049C 1065 nt16.34■□□□□ 0.21
SLD5Q03406 RTC3YHR087W 336 nt16.33■□□□□ 0.2
SLD5Q03406 YER088W-BYER088W-B 147 nt16.29■□□□□ 0.2
SLD5Q03406 YDJ1YNL064C 1230 nt16.29■□□□□ 0.2
SLD5Q03406 PST2YDR032C 597 nt16.24■□□□□ 0.19
SLD5Q03406 SHR5YOL110W 714 nt16.15■□□□□ 0.18
SLD5Q03406 GAR1YHR089C 618 nt15.83■□□□□ 0.12
SLD5Q03406 YKL097CYKL097C 411 nt15.76■□□□□ 0.11
SLD5Q03406 DEP1YAL013W 1218 nt15.55■□□□□ 0.08
SLD5Q03406 SHU1YHL006C 453 nt15.47■□□□□ 0.07
SLD5Q03406 URN1YPR152C 1398 nt15.45■□□□□ 0.06
SLD5Q03406 YNL208WYNL208W 600 nt15.36■□□□□ 0.05
SLD5Q03406 RPN10YHR200W 807 nt15.3■□□□□ 0.04
SLD5Q03406 TIR1YER011W 765 nt15.29■□□□□ 0.04
SLD5Q03406 OPI9YLR338W 858 nt15.17■□□□□ 0.02
SLD5Q03406 YAL037C-BYAL037C-B 975 nt15.1■□□□□ 0.01
SLD5Q03406 YOR139CYOR139C 393 nt15.09■□□□□ 0.01
SLD5Q03406 SSA1YAL005C 1929 nt15.04■□□□□ -0
SLD5Q03406 SAH1YER043C 1350 nt14.96□□□□□ -0.02
SLD5Q03406 SRB2YHR041C 633 nt14.89□□□□□ -0.03
SLD5Q03406 PUT4YOR348C 1884 nt14.89□□□□□ -0.03
SLD5Q03406 NPL3YDR432W 1245 nt14.83□□□□□ -0.04
SLD5Q03406 YJR018WYJR018W 363 nt14.77□□□□□ -0.05
SLD5Q03406 ARE1YCR048W 1833 nt14.73□□□□□ -0.05
SLD5Q03406 PUN1YLR414C 792 nt14.72□□□□□ -0.05
SLD5Q03406 YGR021WYGR021W 873 nt14.71□□□□□ -0.05
SLD5Q03406 HOM6YJR139C 1080 nt14.71□□□□□ -0.05
SLD5Q03406 WWM1YFL010C 636 nt14.69□□□□□ -0.06
SLD5Q03406 YJR120WYJR120W 351 nt14.68□□□□□ -0.06
SLD5Q03406 MNP1YGL068W 585 nt14.67□□□□□ -0.06
SLD5Q03406 YOL037CYOL037C 354 nt14.58□□□□□ -0.08
SLD5Q03406 RPP2BYDR382W 333 nt14.55□□□□□ -0.08
SLD5Q03406 YHR049C-AYHR049C-A 297 nt14.52□□□□□ -0.09
SLD5Q03406 tM(CAU)CtM(CAU)C 72 nt14.49□□□□□ -0.09
SLD5Q03406 IMT4tM(CAU)E 72 nt14.49□□□□□ -0.09
SLD5Q03406 IMT3tM(CAU)J3 72 nt14.49□□□□□ -0.09
SLD5Q03406 IMT1tM(CAU)O1 72 nt14.49□□□□□ -0.09
SLD5Q03406 IMT2tM(CAU)P 72 nt14.49□□□□□ -0.09
SLD5Q03406 RKM5YLR137W 1104 nt14.48□□□□□ -0.09
SLD5Q03406 PTC2YER089C 1395 nt14.46□□□□□ -0.1
SLD5Q03406 YFL021C-AYFL021C-A 855 nt14.45□□□□□ -0.1
SLD5Q03406 SSA3YBL075C 1950 nt14.44□□□□□ -0.1
SLD5Q03406 POA1YBR022W 534 nt14.44□□□□□ -0.1
SLD5Q03406 BDH2YAL061W 1254 nt14.36□□□□□ -0.11
SLD5Q03406 LSM3YLR438C-A 270 nt14.26□□□□□ -0.13
SLD5Q03406 YLR281CYLR281C 468 nt14.25□□□□□ -0.13
SLD5Q03406 NAB2YGL122C 1578 nt14.22□□□□□ -0.13
SLD5Q03406 INM2YDR287W 879 nt14.21□□□□□ -0.13
SLD5Q03406 PUS2YGL063W 1113 nt14.21□□□□□ -0.13
SLD5Q03406 BUD23YCR047C 828 nt14.2□□□□□ -0.14
SLD5Q03406 WHI5YOR083W 888 nt14.13□□□□□ -0.15
SLD5Q03406 DAL1YIR027C 1383 nt14.11□□□□□ -0.15
SLD5Q03406 YBL100CYBL100C 315 nt14.11□□□□□ -0.15
SLD5Q03406 FIS1YIL065C 468 nt14.07□□□□□ -0.16
SLD5Q03406 MOT3YMR070W 1473 nt14.06□□□□□ -0.16
SLD5Q03406 FPR4YLR449W 1179 nt14.05□□□□□ -0.16
SLD5Q03406 BSC6YOL137W 1494 nt14.05□□□□□ -0.16
SLD5Q03406 TRM9YML014W 840 nt14.01□□□□□ -0.17
SLD5Q03406 PHO4YFR034C 939 nt13.98□□□□□ -0.17
SLD5Q03406 FUN26YAL022C 1554 nt13.97□□□□□ -0.17
SLD5Q03406 YPR011CYPR011C 981 nt13.91□□□□□ -0.18
SLD5Q03406 CCT6YDR188W 1641 nt13.86□□□□□ -0.19
SLD5Q03406 DSK2YMR276W 1122 nt13.86□□□□□ -0.19
SLD5Q03406 FMP45YDL222C 930 nt13.84□□□□□ -0.19
SLD5Q03406 YLR154C-GYLR154C-G 150 nt13.83□□□□□ -0.2
SLD5Q03406 YLR236CYLR236C 324 nt13.82□□□□□ -0.2
SLD5Q03406 IMP2'YIL154C 1041 nt13.8□□□□□ -0.2
SLD5Q03406 YCH1YGR203W 447 nt13.74□□□□□ -0.21
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms