RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W YPL260WQ08977 551 aa13.68□□□□□ -0.22
TCD2YKL027W COQ1P18900 473 aa13.67□□□□□ -0.22
TCD2YKL027W RTS1P38903 757 aa13.67□□□□□ -0.22
TCD2YKL027W VHR2P40041 505 aa13.66□□□□□ -0.22
TCD2YKL027W NIT1P40447 199 aa13.65□□□□□ -0.22
TCD2YKL027W CWC15Q03772 175 aaKnown RBP13.65□□□□□ -0.22
TCD2YKL027W KEL3Q08979 651 aaPredicted RBP13.65□□□□□ -0.22
TCD2YKL027W MRD1Q06106 887 aaKnown RBP13.64□□□□□ -0.23
TCD2YKL027W ADP1P25371 1049 aa13.64□□□□□ -0.23
TCD2YKL027W CRG1P38892 291 aaRIP-Chip data13.64□□□□□ -0.23 RIP-Chip
TCD2YKL027W GAL2P13181 574 aa13.63□□□□□ -0.23
TCD2YKL027W RAD53P22216 821 aa13.63□□□□□ -0.23
TCD2YKL027W SPO22P40511 975 aa13.63□□□□□ -0.23
TCD2YKL027W RPS15Q01855 142 aaKnown RBP13.63□□□□□ -0.23
TCD2YKL027W SPN1Q06505 410 aaPredicted RBP13.63□□□□□ -0.23
TCD2YKL027W PMA1P05030 918 aaKnown RBP13.62□□□□□ -0.23
TCD2YKL027W YIR014WP40570 242 aa13.62□□□□□ -0.23
TCD2YKL027W UFD2P54860 961 aa13.62□□□□□ -0.23
TCD2YKL027W RAD61Q99359 647 aa13.62□□□□□ -0.23
TCD2YKL027W YHL050CP38721 697 aa13.61□□□□□ -0.23
TCD2YKL027W CIC1P38779 376 aaKnown RBP13.61□□□□□ -0.23
TCD2YKL027W CSR2Q12734 1121 aa13.61□□□□□ -0.23
TCD2YKL027W CHO2P05374 869 aaKnown RBP13.6□□□□□ -0.23
TCD2YKL027W MPH3P0CE00 602 aa13.6□□□□□ -0.23
TCD2YKL027W KIN1P13185 1064 aa13.6□□□□□ -0.23
TCD2YKL027W PEP3P27801 918 aa13.6□□□□□ -0.23
TCD2YKL027W YBL028CP38202 106 aa13.6□□□□□ -0.23
TCD2YKL027W KEL1P38853 1164 aaKnown RBP13.6□□□□□ -0.23
TCD2YKL027W SNU71P53207 620 aaKnown RBP13.6□□□□□ -0.23
TCD2YKL027W TYW1Q08960 810 aaKnown RBP13.6□□□□□ -0.23
TCD2YKL027W TRL1P09880 827 aaKnown RBP13.59□□□□□ -0.23
TCD2YKL027W PRE8P23639 250 aa13.59□□□□□ -0.23
TCD2YKL027W IMP2'P32351 346 aa13.59□□□□□ -0.23
TCD2YKL027W AIM9P40053 627 aaKnown RBP13.59□□□□□ -0.23
TCD2YKL027W VID27P40157 782 aa13.59□□□□□ -0.23
TCD2YKL027W YIL089WP40500 205 aa13.59□□□□□ -0.23
TCD2YKL027W RER2P35196 286 aa13.58□□□□□ -0.24
TCD2YKL027W TPS3P38426 1054 aaKnown RBP13.58□□□□□ -0.24
TCD2YKL027W KRI1P42846 591 aaKnown RBP13.58□□□□□ -0.24
TCD2YKL027W YDL124WQ07551 312 aaKnown RBP13.58□□□□□ -0.24
TCD2YKL027W RNR2P09938 399 aaKnown RBP13.57□□□□□ -0.24
TCD2YKL027W SRM1P21827 482 aa13.57□□□□□ -0.24
TCD2YKL027W MYO3P36006 1272 aa13.57□□□□□ -0.24
TCD2YKL027W RRT6P53117 311 aaPredicted RBP13.57□□□□□ -0.24
TCD2YKL027W ESF1Q06344 628 aaKnown RBP13.57□□□□□ -0.24
TCD2YKL027W CST26P38226 397 aa13.56□□□□□ -0.24
TCD2YKL027W PGA3Q12746 312 aaKnown RBP13.56□□□□□ -0.24
TCD2YKL027W ANP1P32629 500 aa13.55□□□□□ -0.24
TCD2YKL027W SIS2P36024 562 aa13.55□□□□□ -0.24
TCD2YKL027W VPS8P39702 1274 aa13.54□□□□□ -0.24
TCD2YKL027W EST2Q06163 884 aa13.54□□□□□ -0.24
TCD2YKL027W SKG3Q06315 1026 aa13.54□□□□□ -0.24
TCD2YKL027W PES4P39684 611 aa13.53□□□□□ -0.24
TCD2YKL027W TUB2P02557 457 aaKnown RBP13.52□□□□□ -0.25
TCD2YKL027W RIT1P23796 513 aa13.52□□□□□ -0.25
TCD2YKL027W PFK2P16862 959 aaKnown RBP RIP-Chip data13.51□□□□□ -0.25not detected
TCD2YKL027W GIN4Q12263 1142 aa13.51□□□□□ -0.25
TCD2YKL027W PRO3P32263 286 aaKnown RBP13.5□□□□□ -0.25
TCD2YKL027W PNT1P38969 423 aa13.5□□□□□ -0.25
TCD2YKL027W ALG2P43636 503 aa13.5□□□□□ -0.25
TCD2YKL027W RLF2Q12495 606 aa13.5□□□□□ -0.25
TCD2YKL027W ACA1P39970 489 aa13.49□□□□□ -0.25
TCD2YKL027W VID28P40547 921 aa13.49□□□□□ -0.25
TCD2YKL027W ARP5P53946 755 aa13.49□□□□□ -0.25
TCD2YKL027W ECM23Q02710 187 aa13.49□□□□□ -0.25
TCD2YKL027W TFC6Q06339 672 aa13.49□□□□□ -0.25
TCD2YKL027W LAP2Q10740 671 aa13.49□□□□□ -0.25
TCD2YKL027W CLF1Q12309 687 aaPredicted RBP13.49□□□□□ -0.25
TCD2YKL027W MAK31P23059 88 aa13.48□□□□□ -0.25
TCD2YKL027W FBP26P32604 452 aa13.48□□□□□ -0.25
TCD2YKL027W PCS60P38137 543 aaKnown RBP RIP-Chip data13.48□□□□□ -0.25 RIP-Chip
TCD2YKL027W HDA1P53973 706 aa13.48□□□□□ -0.25
TCD2YKL027W RPT6Q01939 405 aaKnown RBP13.48□□□□□ -0.25
TCD2YKL027W TUS1Q06412 1307 aa13.47□□□□□ -0.25
TCD2YKL027W CHS3P29465 1165 aa13.47□□□□□ -0.25
TCD2YKL027W BSD2P38356 321 aa13.47□□□□□ -0.25
TCD2YKL027W PTK2P47116 818 aaKnown RBP13.47□□□□□ -0.25
TCD2YKL027W YKE2P52553 114 aa13.47□□□□□ -0.25
TCD2YKL027W MYO5Q04439 1219 aaKnown RBP13.47□□□□□ -0.25
TCD2YKL027W SUB2Q07478 446 aaKnown RBP13.47□□□□□ -0.25
TCD2YKL027W ERG12P07277 443 aa13.46□□□□□ -0.25
TCD2YKL027W MATALPHA2P0CY08 210 aa13.46□□□□□ -0.25
TCD2YKL027W HMLALPHA2P0CY09 210 aa13.46□□□□□ -0.25
TCD2YKL027W SRS2P12954 1174 aa13.46□□□□□ -0.25
TCD2YKL027W TIF4631P39935 952 aaKnown RBP13.46□□□□□ -0.25
TCD2YKL027W RPL8BP29453 256 aaKnown RBP13.45□□□□□ -0.26
TCD2YKL027W SPT21P35209 758 aa13.45□□□□□ -0.26
TCD2YKL027W FOL1P53848 824 aa13.45□□□□□ -0.26
TCD2YKL027W OCT1P35999 772 aa13.44□□□□□ -0.26
TCD2YKL027W MAL31P38156 614 aa13.44□□□□□ -0.26
TCD2YKL027W OPY1P38271 328 aa13.44□□□□□ -0.26
TCD2YKL027W UBP10P53874 792 aaPredicted RBP13.44□□□□□ -0.26
TCD2YKL027W VPS30Q02948 557 aa13.44□□□□□ -0.26
TCD2YKL027W HVG1P0CE11 249 aa13.43□□□□□ -0.26
TCD2YKL027W ACE2P21192 770 aa13.43□□□□□ -0.26
TCD2YKL027W PSK2Q08217 1101 aa13.43□□□□□ -0.26
TCD2YKL027W TSR3Q12094 313 aaKnown RBP13.43□□□□□ -0.26
TCD2YKL027W PCT1P13259 424 aa13.42□□□□□ -0.26
TCD2YKL027W YHL017WP38745 532 aa13.42□□□□□ -0.26
TCD2YKL027W CSM2P40465 213 aa13.42□□□□□ -0.26
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms