RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W MON2P48563 1636 aaPredicted RBP22.02■■□□□ 1.11
TCD2YKL027W INO80P53115 1489 aa21.93■■□□□ 1.1
TCD2YKL027W SGS1P35187 1447 aa21.91■■□□□ 1.1
TCD2YKL027W TCB3Q03640 1545 aaKnown RBP21.71■■□□□ 1.07
TCD2YKL027W TY1B-DR4Q07793 1604 aa21.5■■□□□ 1.03
TCD2YKL027W SWR1Q05471 1514 aa21.29■■□□□ 1
TCD2YKL027W HSL1P34244 1518 aa20.93■□□□□ 0.94
TCD2YKL027W DNA2P38859 1522 aa20.92■□□□□ 0.94
TCD2YKL027W SPT6P23615 1451 aaKnown RBP20.89■□□□□ 0.93
TCD2YKL027W KOG1P38873 1557 aa20.81■□□□□ 0.92
TCD2YKL027W SPA2P23201 1466 aaKnown RBP20.74■□□□□ 0.91
TCD2YKL027W SSN2P38931 1420 aa20.59■□□□□ 0.89
TCD2YKL027W HIR3P47171 1648 aa20.52■□□□□ 0.88
TCD2YKL027W XRN1P22147 1528 aaKnown RBP20.26■□□□□ 0.83
TCD2YKL027W THO2P53552 1597 aaKnown RBP20.11■□□□□ 0.81
TCD2YKL027W BUD4P47136 1447 aa20.06■□□□□ 0.8
TCD2YKL027W ECM5Q03214 1411 aa20.05■□□□□ 0.8
TCD2YKL027W REV3P14284 1504 aa19.96■□□□□ 0.79
TCD2YKL027W DRS1P32892 752 aaKnown RBP19.94■□□□□ 0.78
TCD2YKL027W SIN3P22579 1536 aa19.82■□□□□ 0.76
TCD2YKL027W MDS3P53094 1487 aa19.76■□□□□ 0.75
TCD2YKL027W ATG2P53855 1592 aa19.72■□□□□ 0.75
TCD2YKL027W RSE1Q04693 1361 aaKnown RBP19.68■□□□□ 0.74
TCD2YKL027W PEP1P32319 1579 aa19.68■□□□□ 0.74
TCD2YKL027W SSK2P53599 1579 aa19.65■□□□□ 0.74
TCD2YKL027W TAF2P23255 1407 aa19.64■□□□□ 0.73
TCD2YKL027W ESP1Q03018 1630 aa19.52■□□□□ 0.71
TCD2YKL027W SKI3P17883 1432 aaKnown RBP19.48■□□□□ 0.71
TCD2YKL027W MYO2P19524 1574 aaKnown RBP19.38■□□□□ 0.69
TCD2YKL027W YPK9Q12697 1472 aa19.27■□□□□ 0.68
TCD2YKL027W BPT1P14772 1559 aa19.19■□□□□ 0.66
TCD2YKL027W SCC2Q04002 1493 aa19.15■□□□□ 0.66
TCD2YKL027W UFD4P33202 1483 aa19.1■□□□□ 0.65
TCD2YKL027W RPO31P04051 1460 aa19.06■□□□□ 0.64
TCD2YKL027W MTC1P47018 478 aaKnown RBP19.03■□□□□ 0.64
TCD2YKL027W POL1P13382 1468 aa18.93■□□□□ 0.62
TCD2YKL027W YCF1P39109 1515 aaKnown RBP18.89■□□□□ 0.61
TCD2YKL027W TY2B-LR1P0C2J3 1770 aa18.85■□□□□ 0.61
TCD2YKL027W TY2B-FP0CX63 1770 aa18.85■□□□□ 0.61
TCD2YKL027W TY2B-GR2P0CX64 1770 aa18.85■□□□□ 0.61
TCD2YKL027W TY2B-CP25384 1770 aa18.85■□□□□ 0.61
TCD2YKL027W TY2B-DR2Q03494 1770 aa18.85■□□□□ 0.61
TCD2YKL027W TY1B-DR1Q03855 1755 aa18.85■□□□□ 0.61
TCD2YKL027W TY2B-DR3Q07791 1770 aaKnown RBP18.85■□□□□ 0.61
TCD2YKL027W TY2B-OR1Q12113 1770 aa18.85■□□□□ 0.61
TCD2YKL027W TY2B-DR1Q12472 1770 aa18.85■□□□□ 0.61
TCD2YKL027W TY2B-OR2Q12501 1770 aa18.85■□□□□ 0.61
TCD2YKL027W TOP2P06786 1428 aaKnown RBP18.85■□□□□ 0.61
TCD2YKL027W RKR1Q04781 1562 aa18.84■□□□□ 0.61
TCD2YKL027W STU1P38198 1513 aa18.79■□□□□ 0.6
TCD2YKL027W YOR1P53049 1477 aa18.72■□□□□ 0.59
TCD2YKL027W CDC25P04821 1589 aa18.7■□□□□ 0.58
TCD2YKL027W CHD1P32657 1468 aa18.69■□□□□ 0.58
TCD2YKL027W SMC4Q12267 1418 aa18.67■□□□□ 0.58
TCD2YKL027W TY1B-DR3Q99231 1755 aa18.67■□□□□ 0.58
TCD2YKL027W TY1B-BRQ12193 1756 aa18.66■□□□□ 0.58
TCD2YKL027W TY1B-GR3Q12316 1755 aa18.66■□□□□ 0.58
TCD2YKL027W TY1B-ORQ92393 1755 aa18.66■□□□□ 0.58
TCD2YKL027W TY2B-BQ12491 1770 aa18.66■□□□□ 0.58
TCD2YKL027W RQC2Q12532 1038 aaKnown RBP18.58■□□□□ 0.57
TCD2YKL027W TY1B-HO13535 1793 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-DR5P0C2I2 1755 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-DR6P0C2I3 1755 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-LR2P0C2I5 1755 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-LR3P0C2I6 1755 aaKnown RBP18.58■□□□□ 0.56
TCD2YKL027W TY1B-PR1P0C2I9 1755 aaKnown RBP18.58■□□□□ 0.56
TCD2YKL027W TY1B-PR2P0C2J0 1756 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-PR3P0C2J1 1755 aaKnown RBP18.58■□□□□ 0.56
TCD2YKL027W TY1B-JR1P47098 1755 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-ML2Q03434 1755 aaKnown RBP18.58■□□□□ 0.56
TCD2YKL027W TY1B-ER1Q03612 1755 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-ML1Q04711 1755 aaKnown RBP18.58■□□□□ 0.56
TCD2YKL027W TY1B-GR2Q12269 1755 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-OLQ12273 1755 aa18.58■□□□□ 0.56
TCD2YKL027W TY1B-PLQ12414 1755 aaKnown RBP18.58■□□□□ 0.56
TCD2YKL027W PAN1P32521 1480 aa18.57■□□□□ 0.56
TCD2YKL027W YTA7P40340 1379 aa18.56■□□□□ 0.56
TCD2YKL027W MMS22Q06164 1454 aa18.54■□□□□ 0.56
TCD2YKL027W ESC1Q03661 1658 aaKnown RBP18.52■□□□□ 0.55
TCD2YKL027W MYO4P32492 1471 aa18.46■□□□□ 0.55
TCD2YKL027W DNF1P32660 1571 aa18.45■□□□□ 0.54
TCD2YKL027W SPP41P38904 1435 aa18.44■□□□□ 0.54
TCD2YKL027W RPA190P10964 1664 aaKnown RBP18.38■□□□□ 0.53
TCD2YKL027W TRM732Q03496 1420 aa18.32■□□□□ 0.52
TCD2YKL027W MET5P47169 1442 aa18.31■□□□□ 0.52
TCD2YKL027W TSC11P40061 1430 aa18.3■□□□□ 0.52
TCD2YKL027W VTH1P40438 1549 aa18.29■□□□□ 0.52
TCD2YKL027W VTH2P40890 1549 aa18.29■□□□□ 0.52
TCD2YKL027W TY1B-JR2P47100 1755 aaKnown RBP18.24■□□□□ 0.51
TCD2YKL027W TY1B-ER2Q03619 1755 aa18.24■□□□□ 0.51
TCD2YKL027W TY1B-MR1Q04214 1755 aa18.24■□□□□ 0.51
TCD2YKL027W TY1B-MR2Q04670 1755 aaKnown RBP18.24■□□□□ 0.51
TCD2YKL027W TY1B-LR1Q12088 1755 aaKnown RBP18.24■□□□□ 0.51
TCD2YKL027W TY1B-NL1Q12112 1755 aa18.24■□□□□ 0.51
TCD2YKL027W TY1B-GR1Q12141 1755 aa18.24■□□□□ 0.51
TCD2YKL027W TY1B-BLQ12490 1755 aa18.24■□□□□ 0.51
TCD2YKL027W NTE1Q04958 1679 aa18.15■□□□□ 0.5
TCD2YKL027W SNQ2P32568 1501 aaKnown RBP18.13■□□□□ 0.49
TCD2YKL027W STH1P32597 1359 aa18.13■□□□□ 0.49
TCD2YKL027W NUP159P40477 1460 aa18.1■□□□□ 0.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms