RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A RMD1Q03441 430 aa10.97□□□□□ -0.65
LSB3YFR024C-A HVG1P0CE11 249 aa10.96□□□□□ -0.65
LSB3YFR024C-A KTR1P27810 393 aaKnown RBP10.96□□□□□ -0.65
LSB3YFR024C-A PCS60P38137 543 aaKnown RBP RIP-Chip data10.96□□□□□ -0.65not detected
LSB3YFR024C-A TPS3P38426 1054 aaKnown RBP10.96□□□□□ -0.65
LSB3YFR024C-A KEL1P38853 1164 aaKnown RBP10.96□□□□□ -0.65
LSB3YFR024C-A PIB2P53191 635 aa10.96□□□□□ -0.65
LSB3YFR024C-A DUS1P53759 423 aaKnown RBP10.96□□□□□ -0.65
LSB3YFR024C-A KAR5Q04746 504 aa10.96□□□□□ -0.65
LSB3YFR024C-A RAD50P12753 1312 aa10.96□□□□□ -0.66
LSB3YFR024C-A CDC27P38042 758 aa10.94□□□□□ -0.66
LSB3YFR024C-A BBC1P47068 1157 aa10.94□□□□□ -0.66
LSB3YFR024C-A CST9Q06032 482 aa10.94□□□□□ -0.66
LSB3YFR024C-A TAH18Q12181 623 aa10.94□□□□□ -0.66
LSB3YFR024C-A GIN4Q12263 1142 aa10.94□□□□□ -0.66
LSB3YFR024C-A TIF6Q12522 245 aaKnown RBP10.94□□□□□ -0.66
LSB3YFR024C-A OPI1P21957 404 aa10.93□□□□□ -0.66
LSB3YFR024C-A STM1P39015 273 aaKnown RBP10.93□□□□□ -0.66
LSB3YFR024C-A SNU71P53207 620 aaKnown RBP10.93□□□□□ -0.66
LSB3YFR024C-A YPL260WQ08977 551 aa10.93□□□□□ -0.66
LSB3YFR024C-A KEL3Q08979 651 aaPredicted RBP10.93□□□□□ -0.66
LSB3YFR024C-A PFK2P16862 959 aaKnown RBP RIP-Chip data10.92□□□□□ -0.66not detected
LSB3YFR024C-A YBL028CP38202 106 aa10.92□□□□□ -0.66
LSB3YFR024C-A MPH3P0CE00 602 aa10.91□□□□□ -0.66
LSB3YFR024C-A KIN1P13185 1064 aa10.91□□□□□ -0.66
LSB3YFR024C-A PKH3Q03306 898 aaPredicted RBP10.91□□□□□ -0.66
LSB3YFR024C-A PPM2Q08282 695 aa10.91□□□□□ -0.66
LSB3YFR024C-A LAM4P38800 1345 aa10.91□□□□□ -0.66
LSB3YFR024C-A RSC30P38781 883 aa10.9□□□□□ -0.66
LSB3YFR024C-A YDL124WQ07551 312 aaKnown RBP10.9□□□□□ -0.66
LSB3YFR024C-A SRF1Q12516 437 aa10.9□□□□□ -0.66
LSB3YFR024C-A VAS1P07806 1104 aaKnown RBP10.9□□□□□ -0.67
LSB3YFR024C-A RTS1P38903 757 aa10.9□□□□□ -0.67
LSB3YFR024C-A RRP8P38961 392 aaKnown RBP10.9□□□□□ -0.67
LSB3YFR024C-A RBA50Q04418 439 aa10.9□□□□□ -0.67
LSB3YFR024C-A RIM20Q12033 661 aa10.9□□□□□ -0.67
LSB3YFR024C-A TUB2P02557 457 aaKnown RBP10.89□□□□□ -0.67
LSB3YFR024C-A MET1P36150 593 aa10.89□□□□□ -0.67
LSB3YFR024C-A APE3P37302 537 aaKnown RBP10.89□□□□□ -0.67
LSB3YFR024C-A CST26P38226 397 aa10.89□□□□□ -0.67
LSB3YFR024C-A SLN1P39928 1220 aaPredicted RBP10.89□□□□□ -0.67
LSB3YFR024C-A ACA1P39970 489 aa10.88□□□□□ -0.67
LSB3YFR024C-A MRD1Q06106 887 aaKnown RBP10.88□□□□□ -0.67
LSB3YFR024C-A COQ1P18900 473 aa10.87□□□□□ -0.67
LSB3YFR024C-A PRE8P23639 250 aa10.87□□□□□ -0.67
LSB3YFR024C-A MOT2P34909 587 aaKnown RBP10.87□□□□□ -0.67
LSB3YFR024C-A YHL050CP38721 697 aa10.87□□□□□ -0.67
LSB3YFR024C-A PEX29Q03370 554 aa10.87□□□□□ -0.67
LSB3YFR024C-A SRM1P21827 482 aa10.86□□□□□ -0.67
LSB3YFR024C-A OCT1P35999 772 aa10.86□□□□□ -0.67
LSB3YFR024C-A SSF2Q12153 453 aaPredicted RBP10.86□□□□□ -0.67
LSB3YFR024C-A RAD61Q99359 647 aa10.86□□□□□ -0.67
LSB3YFR024C-A AAP1P37898 856 aaKnown RBP10.85□□□□□ -0.67
LSB3YFR024C-A JIP4Q03361 876 aa10.85□□□□□ -0.67
LSB3YFR024C-A FPR4Q06205 392 aaPredicted RBP10.85□□□□□ -0.67
LSB3YFR024C-A TOM1Q03280 3268 aa10.85□□□□□ -0.67
LSB3YFR024C-A TPM1P17536 199 aaKnown RBP10.84□□□□□ -0.67
LSB3YFR024C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data10.84□□□□□ -0.67not detected
LSB3YFR024C-A VID27P40157 782 aa10.84□□□□□ -0.67
LSB3YFR024C-A LYS14P40971 790 aa10.83□□□□□ -0.68
LSB3YFR024C-A NET1P47035 1189 aa10.83□□□□□ -0.68
LSB3YFR024C-A UFD2P54860 961 aa10.83□□□□□ -0.68
LSB3YFR024C-A RPS15Q01855 142 aaKnown RBP10.83□□□□□ -0.68
LSB3YFR024C-A SKG3Q06315 1026 aa10.83□□□□□ -0.68
LSB3YFR024C-A SUB2Q07478 446 aaKnown RBP10.83□□□□□ -0.68
LSB3YFR024C-A LAP2Q10740 671 aa10.83□□□□□ -0.68
LSB3YFR024C-A TIF4631P39935 952 aaKnown RBP10.82□□□□□ -0.68
LSB3YFR024C-A CHO2P05374 869 aaKnown RBP10.81□□□□□ -0.68
LSB3YFR024C-A ERG12P07277 443 aa10.81□□□□□ -0.68
LSB3YFR024C-A ASH1P34233 588 aa10.81□□□□□ -0.68
LSB3YFR024C-A BRN1P38170 754 aa10.81□□□□□ -0.68
LSB3YFR024C-A VAB2P40003 282 aa10.81□□□□□ -0.68
LSB3YFR024C-A SPR3P41901 512 aa10.81□□□□□ -0.68
LSB3YFR024C-A GCR2Q01722 534 aa10.81□□□□□ -0.68
LSB3YFR024C-A PES4P39684 611 aa10.8□□□□□ -0.68
LSB3YFR024C-A VPS8P39702 1274 aa10.8□□□□□ -0.68
LSB3YFR024C-A NCS6P53088 359 aa10.8□□□□□ -0.68
LSB3YFR024C-A MCD4P36051 919 aa10.79□□□□□ -0.68
LSB3YFR024C-A CRG1P38892 291 aaRIP-Chip data10.79□□□□□ -0.68not detected
LSB3YFR024C-A SPN1Q06505 410 aaPredicted RBP10.79□□□□□ -0.68
LSB3YFR024C-A TFC8Q12308 588 aa10.79□□□□□ -0.68
LSB3YFR024C-A YDJ1P25491 409 aaKnown RBP10.78□□□□□ -0.68
LSB3YFR024C-A MYO3P36006 1272 aa10.78□□□□□ -0.68
LSB3YFR024C-A ERG7P38604 731 aa10.78□□□□□ -0.68
LSB3YFR024C-A TUS1Q06412 1307 aa10.78□□□□□ -0.68
LSB3YFR024C-A FBP1P09201 348 aa10.77□□□□□ -0.68
LSB3YFR024C-A PER1P25625 357 aa10.77□□□□□ -0.68
LSB3YFR024C-A SPB4P25808 606 aaPredicted RBP10.77□□□□□ -0.68
LSB3YFR024C-A CHS3P29465 1165 aa10.77□□□□□ -0.68
LSB3YFR024C-A ANP1P32629 500 aa10.77□□□□□ -0.68
LSB3YFR024C-A YLR225CQ05948 407 aaKnown RBP10.77□□□□□ -0.68
LSB3YFR024C-A CFT2Q12102 859 aaPredicted RBP10.77□□□□□ -0.68
LSB3YFR024C-A HOP09932 586 aa10.77□□□□□ -0.69
LSB3YFR024C-A RIT1P23796 513 aa10.77□□□□□ -0.69
LSB3YFR024C-A PRO3P32263 286 aaKnown RBP10.77□□□□□ -0.69
LSB3YFR024C-A YML037CQ03703 340 aa10.77□□□□□ -0.69
LSB3YFR024C-A SGD1Q06132 899 aa10.77□□□□□ -0.69
LSB3YFR024C-A KRS1P15180 591 aaKnown RBP10.76□□□□□ -0.69
LSB3YFR024C-A CDC60P26637 1090 aaKnown RBP10.76□□□□□ -0.69
LSB3YFR024C-A DLD1P32891 587 aa10.76□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms