RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C CTI6Q08923 506 aa12.1□□□□□ -0.47
CCA1YER168C DPH6Q12429 685 aa12.1□□□□□ -0.47
CCA1YER168C CBP3P21560 335 aa12.09□□□□□ -0.47
CCA1YER168C GSY2P27472 705 aa12.09□□□□□ -0.47
CCA1YER168C ISW2Q08773 1120 aa12.09□□□□□ -0.47
CCA1YER168C BUG1Q12191 341 aa12.09□□□□□ -0.47
CCA1YER168C TFC8Q12308 588 aa12.09□□□□□ -0.47
CCA1YER168C CHO2P05374 869 aaKnown RBP12.08□□□□□ -0.48
CCA1YER168C MCM4P30665 933 aaKnown RBP12.08□□□□□ -0.48
CCA1YER168C YKT6P36015 200 aaKnown RBP12.08□□□□□ -0.48
CCA1YER168C RPN10P38886 268 aaKnown RBP12.08□□□□□ -0.48
CCA1YER168C AKR1P39010 764 aa12.08□□□□□ -0.48
CCA1YER168C NUG1P40010 520 aaKnown RBP12.08□□□□□ -0.48
CCA1YER168C ICP55P40051 511 aa12.08□□□□□ -0.48
CCA1YER168C IOC3P43596 787 aa12.08□□□□□ -0.48
CCA1YER168C HCA4P20448 770 aaKnown RBP12.08□□□□□ -0.48
CCA1YER168C MFT1P33441 392 aaKnown RBP12.08□□□□□ -0.48
CCA1YER168C NPL4P33755 580 aa12.08□□□□□ -0.48
CCA1YER168C MNR2P35724 969 aa12.08□□□□□ -0.48
CCA1YER168C TPM2P40414 161 aa12.08□□□□□ -0.48
CCA1YER168C LEO1P38439 464 aa12.07□□□□□ -0.48
CCA1YER168C RRP8P38961 392 aaKnown RBP12.07□□□□□ -0.48
CCA1YER168C WAR1Q03631 944 aa12.07□□□□□ -0.48
CCA1YER168C DCS2Q12123 353 aa12.07□□□□□ -0.48
CCA1YER168C FIG2P25653 1609 aa12.06□□□□□ -0.48
CCA1YER168C CYB2P00175 591 aa12.06□□□□□ -0.48
CCA1YER168C HXK1P04806 485 aaKnown RBP12.06□□□□□ -0.48
CCA1YER168C RGP1P16664 663 aa12.06□□□□□ -0.48
CCA1YER168C HDA1P53973 706 aa12.06□□□□□ -0.48
CCA1YER168C HOS3Q02959 697 aaKnown RBP12.06□□□□□ -0.48
CCA1YER168C DIB1Q06819 143 aaPredicted RBP12.06□□□□□ -0.48
CCA1YER168C SWI4P25302 1093 aaKnown RBP12.05□□□□□ -0.48
CCA1YER168C GEF1P37020 779 aa12.05□□□□□ -0.48
CCA1YER168C SPL2P38839 148 aa12.05□□□□□ -0.48
CCA1YER168C UFD2P54860 961 aa12.05□□□□□ -0.48
CCA1YER168C SYF1Q04048 859 aaPredicted RBP12.05□□□□□ -0.48
CCA1YER168C NOC2P39744 710 aaKnown RBP12.04□□□□□ -0.48
CCA1YER168C RPS15Q01855 142 aaKnown RBP12.04□□□□□ -0.48
CCA1YER168C TFC6Q06339 672 aa12.04□□□□□ -0.48
CCA1YER168C BMH2P34730 273 aaKnown RBP12.04□□□□□ -0.48
CCA1YER168C PTK2P47116 818 aaKnown RBP12.04□□□□□ -0.48
CCA1YER168C UTP22P53254 1237 aaPredicted RBP12.04□□□□□ -0.48
CCA1YER168C BDF2Q07442 638 aa12.04□□□□□ -0.48
CCA1YER168C CDC6P09119 513 aa12.03□□□□□ -0.48
CCA1YER168C URA1P28272 314 aaPredicted RBP12.02□□□□□ -0.49
CCA1YER168C PSY4P38193 441 aa12.02□□□□□ -0.49
CCA1YER168C RPT4P53549 437 aaKnown RBP12.02□□□□□ -0.49
CCA1YER168C RIX7Q07844 837 aaKnown RBP12.02□□□□□ -0.49
CCA1YER168C GET3Q12154 354 aaKnown RBP12.02□□□□□ -0.49
CCA1YER168C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.02□□□□□ -0.49not detected
CCA1YER168C VPS1P21576 704 aaKnown RBP12.01□□□□□ -0.49
CCA1YER168C BOI1P38041 980 aaKnown RBP12.01□□□□□ -0.49
CCA1YER168C RPN1P38764 993 aaKnown RBP12.01□□□□□ -0.49
CCA1YER168C TFG2P41896 400 aaPredicted RBP12.01□□□□□ -0.49
CCA1YER168C SSA2P10592 639 aaKnown RBP12□□□□□ -0.49
CCA1YER168C RPT3P33298 428 aaKnown RBP12□□□□□ -0.49
CCA1YER168C PTK1P36002 662 aaPredicted RBP12□□□□□ -0.49
CCA1YER168C CTH1P47976 325 aa12□□□□□ -0.49
CCA1YER168C FAR11P53917 953 aa12□□□□□ -0.49
CCA1YER168C IRC4Q03036 179 aa12□□□□□ -0.49
CCA1YER168C ANP1P32629 500 aa12□□□□□ -0.49
CCA1YER168C YHL050CP38721 697 aa12□□□□□ -0.49
CCA1YER168C RPL22AP05749 121 aaKnown RBP11.99□□□□□ -0.49
CCA1YER168C LCB1P25045 558 aaKnown RBP11.99□□□□□ -0.49
CCA1YER168C BDF1P35817 686 aa11.99□□□□□ -0.49
CCA1YER168C MYO3P36006 1272 aa11.99□□□□□ -0.49
CCA1YER168C LYS4P49367 693 aaPredicted RBP11.99□□□□□ -0.49
CCA1YER168C CUE3P53137 624 aaKnown RBP11.99□□□□□ -0.49
CCA1YER168C YMR074CQ04773 145 aa11.99□□□□□ -0.49
CCA1YER168C PMD1P32634 1753 aa11.98□□□□□ -0.49
CCA1YER168C FRD1P32614 470 aaKnown RBP11.98□□□□□ -0.49
CCA1YER168C TMA16Q08687 178 aa11.98□□□□□ -0.49
CCA1YER168C CAF20P12962 161 aaKnown RBP11.97□□□□□ -0.49
CCA1YER168C KRE2P27809 442 aa11.97□□□□□ -0.49
CCA1YER168C RPG1P38249 964 aaKnown RBP11.97□□□□□ -0.49
CCA1YER168C RXT2P38255 430 aa11.97□□□□□ -0.49
CCA1YER168C RTS1P38903 757 aa11.97□□□□□ -0.49
CCA1YER168C MSH4P40965 878 aaPredicted RBP11.97□□□□□ -0.49
CCA1YER168C CEP3P40969 608 aa11.97□□□□□ -0.49
CCA1YER168C YOR111WQ99210 232 aa11.97□□□□□ -0.49
CCA1YER168C CSM2P40465 213 aa11.96□□□□□ -0.5
CCA1YER168C JSN1P47135 1091 aaKnown RBP RIP-Chip data11.96□□□□□ -0.5not detected
CCA1YER168C ALD2P47771 506 aa11.96□□□□□ -0.5
CCA1YER168C MRD1Q06106 887 aaKnown RBP11.96□□□□□ -0.5
CCA1YER168C CSC1Q06538 782 aa11.96□□□□□ -0.5
CCA1YER168C UBP1P25037 809 aa11.95□□□□□ -0.5
CCA1YER168C ASF1P32447 279 aa11.95□□□□□ -0.5
CCA1YER168C MAL31P38156 614 aa11.95□□□□□ -0.5
CCA1YER168C TOS1P38288 455 aa11.95□□□□□ -0.5
CCA1YER168C PCI8P40512 444 aa11.95□□□□□ -0.5
CCA1YER168C YFH7P43591 353 aa11.95□□□□□ -0.5
CCA1YER168C STR2P47164 639 aa11.95□□□□□ -0.5
CCA1YER168C GDE1Q02979 1223 aa11.95□□□□□ -0.5
CCA1YER168C SFI1Q12369 946 aa11.95□□□□□ -0.5
CCA1YER168C PTC5Q12511 572 aa11.95□□□□□ -0.5
CCA1YER168C MAK31P23059 88 aa11.94□□□□□ -0.5
CCA1YER168C MCM3P24279 971 aaKnown RBP11.94□□□□□ -0.5
CCA1YER168C CDC15P27636 974 aa11.94□□□□□ -0.5
CCA1YER168C MDL2P33311 773 aa11.94□□□□□ -0.5
CCA1YER168C VPS75P53853 264 aa11.94□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms