Protein–RNA interactions for Protein: P12962

CAF20, Cap-associated protein CAF20, yeastyeast

Known RBP Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF20P12962 YML009W-BYML009W-B 477 nt25.05■■□□□ 1.6
CAF20P12962 NOP1YDL014W 984 nt24.51■■□□□ 1.51
CAF20P12962 NSR1YGR159C 1245 nt24.46■■□□□ 1.51
CAF20P12962 YKL036CYKL036C 393 nt23.19■■□□□ 1.3
CAF20P12962 Q0297Q0297 156 nt21.76■■□□□ 1.07
CAF20P12962 YJL027CYJL027C 417 nt21.73■■□□□ 1.07
CAF20P12962 SRX1YKL086W 384 nt21.52■■□□□ 1.04
CAF20P12962 SCS3YGL126W 1143 nt21.45■■□□□ 1.02
CAF20P12962 MDJ1YFL016C 1536 nt21.25■□□□□ 0.99
CAF20P12962 YCR051WYCR051W 669 nt20.4■□□□□ 0.86
CAF20P12962 YOL085CYOL085C 342 nt20.15■□□□□ 0.82
CAF20P12962 PKP1YIL042C 1185 nt19.77■□□□□ 0.76
CAF20P12962 SCJ1YMR214W 1134 nt19.63■□□□□ 0.73
CAF20P12962 RPP1BYDL130W 321 nt19.5■□□□□ 0.71
CAF20P12962 ATS1YAL020C 1002 nt19.35■□□□□ 0.69
CAF20P12962 TRN1tP(UGG)A 72 nt19.16■□□□□ 0.66
CAF20P12962 SUF9tP(UGG)F 72 nt19.16■□□□□ 0.66
CAF20P12962 SUF8tP(UGG)H 72 nt19.16■□□□□ 0.66
CAF20P12962 tP(UGG)LtP(UGG)L 72 nt19.16■□□□□ 0.66
CAF20P12962 SUF7tP(UGG)M 72 nt19.16■□□□□ 0.66
CAF20P12962 tP(UGG)N1tP(UGG)N1 72 nt19.16■□□□□ 0.66
CAF20P12962 tP(UGG)N2tP(UGG)N2 72 nt19.16■□□□□ 0.66
CAF20P12962 tP(UGG)O1tP(UGG)O1 72 nt19.16■□□□□ 0.66
CAF20P12962 SUF11tP(UGG)O2 72 nt19.16■□□□□ 0.66
CAF20P12962 DBP2YNL112W 1641 nt19.13■□□□□ 0.65
CAF20P12962 CCC1YLR220W 969 nt18.93■□□□□ 0.62
CAF20P12962 PET122YER153C 765 nt18.61■□□□□ 0.57
CAF20P12962 SCR1SCR1 522 nt18.41■□□□□ 0.54
CAF20P12962 tP(UGG)O3tP(UGG)O3 72 nt18.3■□□□□ 0.52
CAF20P12962 RRN5YLR141W 1092 nt18.13■□□□□ 0.49
CAF20P12962 YBR190WYBR190W 312 nt17.93■□□□□ 0.46
CAF20P12962 PST2YDR032C 597 nt17.88■□□□□ 0.45
CAF20P12962 RTC3YHR087W 336 nt17.86■□□□□ 0.45
CAF20P12962 RVS167YDR388W 1449 nt17.84■□□□□ 0.45
CAF20P12962 RSB1YOR049C 1065 nt17.83■□□□□ 0.44
CAF20P12962 YER088W-BYER088W-B 147 nt17.79■□□□□ 0.44
CAF20P12962 YDJ1YNL064C 1230 nt17.68■□□□□ 0.42
CAF20P12962 SHR5YOL110W 714 nt17.46■□□□□ 0.39
CAF20P12962 YKL097CYKL097C 411 nt17.33■□□□□ 0.36
CAF20P12962 GAR1YHR089C 618 nt17.19■□□□□ 0.34
CAF20P12962 SHU1YHL006C 453 nt17.01■□□□□ 0.31
CAF20P12962 DEP1YAL013W 1218 nt16.82■□□□□ 0.28
CAF20P12962 YOR139CYOR139C 393 nt16.68■□□□□ 0.26
CAF20P12962 URN1YPR152C 1398 nt16.64■□□□□ 0.26
CAF20P12962 TIR1YER011W 765 nt16.6■□□□□ 0.25
CAF20P12962 YAL037C-BYAL037C-B 975 nt16.59■□□□□ 0.25
CAF20P12962 YNL208WYNL208W 600 nt16.56■□□□□ 0.24
CAF20P12962 RPN10YHR200W 807 nt16.39■□□□□ 0.21
CAF20P12962 SSA1YAL005C 1929 nt16.37■□□□□ 0.21
CAF20P12962 SRB2YHR041C 633 nt16.33■□□□□ 0.2
CAF20P12962 OPI9YLR338W 858 nt16.31■□□□□ 0.2
CAF20P12962 NPL3YDR432W 1245 nt16.24■□□□□ 0.19
CAF20P12962 SAH1YER043C 1350 nt16.1■□□□□ 0.17
CAF20P12962 MNP1YGL068W 585 nt16.06■□□□□ 0.16
CAF20P12962 HOM6YJR139C 1080 nt16.06■□□□□ 0.16
CAF20P12962 WWM1YFL010C 636 nt16.01■□□□□ 0.15
CAF20P12962 tM(CAU)CtM(CAU)C 72 nt15.99■□□□□ 0.15
CAF20P12962 IMT4tM(CAU)E 72 nt15.99■□□□□ 0.15
CAF20P12962 IMT3tM(CAU)J3 72 nt15.99■□□□□ 0.15
CAF20P12962 IMT1tM(CAU)O1 72 nt15.99■□□□□ 0.15
CAF20P12962 IMT2tM(CAU)P 72 nt15.99■□□□□ 0.15
CAF20P12962 YGR021WYGR021W 873 nt15.96■□□□□ 0.15
CAF20P12962 PUT4YOR348C 1884 nt15.96■□□□□ 0.15
CAF20P12962 YJR120WYJR120W 351 nt15.95■□□□□ 0.14
CAF20P12962 YJR018WYJR018W 363 nt15.9■□□□□ 0.14
CAF20P12962 YOL037CYOL037C 354 nt15.9■□□□□ 0.14
CAF20P12962 ARE1YCR048W 1833 nt15.85■□□□□ 0.13
CAF20P12962 SSA3YBL075C 1950 nt15.83■□□□□ 0.12
CAF20P12962 RKM5YLR137W 1104 nt15.79■□□□□ 0.12
CAF20P12962 PUN1YLR414C 792 nt15.77■□□□□ 0.12
CAF20P12962 YFL021C-AYFL021C-A 855 nt15.67■□□□□ 0.1
CAF20P12962 RPP2BYDR382W 333 nt15.62■□□□□ 0.09
CAF20P12962 YLR281CYLR281C 468 nt15.61■□□□□ 0.09
CAF20P12962 PUS2YGL063W 1113 nt15.59■□□□□ 0.09
CAF20P12962 PTC2YER089C 1395 nt15.54■□□□□ 0.08
CAF20P12962 YHR049C-AYHR049C-A 297 nt15.54■□□□□ 0.08
CAF20P12962 MOT3YMR070W 1473 nt15.53■□□□□ 0.08
CAF20P12962 BDH2YAL061W 1254 nt15.51■□□□□ 0.07
CAF20P12962 POA1YBR022W 534 nt15.47■□□□□ 0.07
CAF20P12962 WHI5YOR083W 888 nt15.45■□□□□ 0.06
CAF20P12962 LSM3YLR438C-A 270 nt15.41■□□□□ 0.06
CAF20P12962 YPR011CYPR011C 981 nt15.36■□□□□ 0.05
CAF20P12962 INM2YDR287W 879 nt15.24■□□□□ 0.03
CAF20P12962 NAB2YGL122C 1578 nt15.24■□□□□ 0.03
CAF20P12962 YLR236CYLR236C 324 nt15.19■□□□□ 0.02
CAF20P12962 YBL100CYBL100C 315 nt15.19■□□□□ 0.02
CAF20P12962 BUD23YCR047C 828 nt15.18■□□□□ 0.02
CAF20P12962 FMP45YDL222C 930 nt15.18■□□□□ 0.02
CAF20P12962 BSC6YOL137W 1494 nt15.15■□□□□ 0.02
CAF20P12962 FIS1YIL065C 468 nt15.15■□□□□ 0.02
CAF20P12962 DAL1YIR027C 1383 nt15.14■□□□□ 0.01
CAF20P12962 DSK2YMR276W 1122 nt15.14■□□□□ 0.01
CAF20P12962 MRPL8YJL063C 717 nt15.08■□□□□ 0
CAF20P12962 TRM9YML014W 840 nt15.08■□□□□ 0
CAF20P12962 FUN26YAL022C 1554 nt15.07■□□□□ 0
CAF20P12962 FPR4YLR449W 1179 nt15.07■□□□□ 0
CAF20P12962 YCH1YGR203W 447 nt15.06■□□□□ 0
CAF20P12962 PHO4YFR034C 939 nt15.02■□□□□ -0
CAF20P12962 YLR154C-GYLR154C-G 150 nt15.02■□□□□ -0
CAF20P12962 IMP2'YIL154C 1041 nt14.99□□□□□ -0.01
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms