RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C SGS1P35187 1447 aa18.6■□□□□ 0.57
CCA1YER168C INO80P53115 1489 aa18.17■□□□□ 0.5
CCA1YER168C SPA2P23201 1466 aaKnown RBP18.01■□□□□ 0.47
CCA1YER168C SSN2P38931 1420 aa17.91■□□□□ 0.46
CCA1YER168C TCB3Q03640 1545 aaKnown RBP17.83■□□□□ 0.44
CCA1YER168C TY1B-DR4Q07793 1604 aa17.61■□□□□ 0.41
CCA1YER168C HSL1P34244 1518 aa17.36■□□□□ 0.37
CCA1YER168C MON2P48563 1636 aaPredicted RBP17.31■□□□□ 0.36
CCA1YER168C DRS1P32892 752 aaKnown RBP17.29■□□□□ 0.36
CCA1YER168C SPT6P23615 1451 aaKnown RBP17.27■□□□□ 0.35
CCA1YER168C SWR1Q05471 1514 aa17.1■□□□□ 0.33
CCA1YER168C HIR3P47171 1648 aa17.05■□□□□ 0.32
CCA1YER168C XRN1P22147 1528 aaKnown RBP16.96■□□□□ 0.31
CCA1YER168C REV3P14284 1504 aa16.77■□□□□ 0.27
CCA1YER168C SIN3P22579 1536 aa16.68■□□□□ 0.26
CCA1YER168C THO2P53552 1597 aaKnown RBP16.64■□□□□ 0.25
CCA1YER168C SSK2P53599 1579 aa16.58■□□□□ 0.25
CCA1YER168C TAF2P23255 1407 aa16.5■□□□□ 0.23
CCA1YER168C DNA2P38859 1522 aa16.47■□□□□ 0.23
CCA1YER168C KOG1P38873 1557 aa16.42■□□□□ 0.22
CCA1YER168C ESP1Q03018 1630 aa16.4■□□□□ 0.22
CCA1YER168C MYO2P19524 1574 aaKnown RBP16.36■□□□□ 0.21
CCA1YER168C BUD4P47136 1447 aa16.34■□□□□ 0.21
CCA1YER168C ATG2P53855 1592 aa16.27■□□□□ 0.2
CCA1YER168C CHD1P32657 1468 aa16.24■□□□□ 0.19
CCA1YER168C SKI3P17883 1432 aaKnown RBP16.23■□□□□ 0.19
CCA1YER168C ECM5Q03214 1411 aa16.23■□□□□ 0.19
CCA1YER168C MMS22Q06164 1454 aa16.2■□□□□ 0.18
CCA1YER168C POL1P13382 1468 aa16.18■□□□□ 0.18
CCA1YER168C YPK9Q12697 1472 aa16.16■□□□□ 0.18
CCA1YER168C STU1P38198 1513 aa16.11■□□□□ 0.17
CCA1YER168C PEP1P32319 1579 aa16.08■□□□□ 0.17
CCA1YER168C MDS3P53094 1487 aa16.05■□□□□ 0.16
CCA1YER168C SCC2Q04002 1493 aa15.99■□□□□ 0.15
CCA1YER168C YTA7P40340 1379 aa15.98■□□□□ 0.15
CCA1YER168C BPT1P14772 1559 aa15.96■□□□□ 0.15
CCA1YER168C RKR1Q04781 1562 aa15.95■□□□□ 0.14
CCA1YER168C RPO31P04051 1460 aa15.92■□□□□ 0.14
CCA1YER168C YOR1P53049 1477 aa15.92■□□□□ 0.14
CCA1YER168C TOP2P06786 1428 aaKnown RBP15.82■□□□□ 0.12
CCA1YER168C MYO4P32492 1471 aa15.82■□□□□ 0.12
CCA1YER168C YCF1P39109 1515 aaKnown RBP15.8■□□□□ 0.12
CCA1YER168C UFD4P33202 1483 aa15.79■□□□□ 0.12
CCA1YER168C SMC4Q12267 1418 aa15.78■□□□□ 0.12
CCA1YER168C SAS10Q12136 610 aaPredicted RBP15.76■□□□□ 0.11
CCA1YER168C TY2B-LR1P0C2J3 1770 aa15.71■□□□□ 0.11
CCA1YER168C TY2B-FP0CX63 1770 aa15.71■□□□□ 0.11
CCA1YER168C TY2B-GR2P0CX64 1770 aa15.71■□□□□ 0.11
CCA1YER168C TY2B-CP25384 1770 aa15.71■□□□□ 0.11
CCA1YER168C TY2B-DR2Q03494 1770 aa15.71■□□□□ 0.11
CCA1YER168C TY1B-DR1Q03855 1755 aa15.71■□□□□ 0.11
CCA1YER168C TY2B-DR3Q07791 1770 aaKnown RBP15.71■□□□□ 0.11
CCA1YER168C TY2B-OR1Q12113 1770 aa15.71■□□□□ 0.11
CCA1YER168C TY2B-DR1Q12472 1770 aa15.71■□□□□ 0.11
CCA1YER168C TY2B-OR2Q12501 1770 aa15.71■□□□□ 0.11
CCA1YER168C TY1B-DR3Q99231 1755 aa15.66■□□□□ 0.1
CCA1YER168C TRM732Q03496 1420 aa15.62■□□□□ 0.09
CCA1YER168C SNQ2P32568 1501 aaKnown RBP15.62■□□□□ 0.09
CCA1YER168C TY2B-BQ12491 1770 aa15.58■□□□□ 0.08
CCA1YER168C RSE1Q04693 1361 aaKnown RBP15.58■□□□□ 0.08
CCA1YER168C STH1P32597 1359 aa15.54■□□□□ 0.08
CCA1YER168C TAF7Q05021 590 aa15.5■□□□□ 0.07
CCA1YER168C IKI3Q06706 1349 aaKnown RBP15.47■□□□□ 0.07
CCA1YER168C MLP2P40457 1679 aa15.46■□□□□ 0.07
CCA1YER168C SPP41P38904 1435 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-HO13535 1793 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-DR5P0C2I2 1755 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-DR6P0C2I3 1755 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-LR2P0C2I5 1755 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-LR3P0C2I6 1755 aaKnown RBP15.45■□□□□ 0.06
CCA1YER168C TY1B-PR1P0C2I9 1755 aaKnown RBP15.45■□□□□ 0.06
CCA1YER168C TY1B-PR2P0C2J0 1756 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-PR3P0C2J1 1755 aaKnown RBP15.45■□□□□ 0.06
CCA1YER168C TY1B-JR1P47098 1755 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-ML2Q03434 1755 aaKnown RBP15.45■□□□□ 0.06
CCA1YER168C TY1B-ER1Q03612 1755 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-ML1Q04711 1755 aaKnown RBP15.45■□□□□ 0.06
CCA1YER168C TY1B-GR2Q12269 1755 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-OLQ12273 1755 aa15.45■□□□□ 0.06
CCA1YER168C TY1B-PLQ12414 1755 aaKnown RBP15.45■□□□□ 0.06
CCA1YER168C PDR15Q04182 1529 aaKnown RBP15.44■□□□□ 0.06
CCA1YER168C TY1B-BRQ12193 1756 aa15.44■□□□□ 0.06
CCA1YER168C TY1B-GR3Q12316 1755 aa15.44■□□□□ 0.06
CCA1YER168C TY1B-ORQ92393 1755 aa15.44■□□□□ 0.06
CCA1YER168C ULS1Q08562 1619 aa15.39■□□□□ 0.05
CCA1YER168C NUP170P38181 1502 aa15.38■□□□□ 0.05
CCA1YER168C GEA1P47102 1408 aaPredicted RBP15.35■□□□□ 0.05
CCA1YER168C VTH1P40438 1549 aa15.34■□□□□ 0.05
CCA1YER168C VTH2P40890 1549 aa15.34■□□□□ 0.05
CCA1YER168C CDC25P04821 1589 aa15.34■□□□□ 0.05
CCA1YER168C TSC11P40061 1430 aa15.33■□□□□ 0.04
CCA1YER168C RQC2Q12532 1038 aaKnown RBP15.31■□□□□ 0.04
CCA1YER168C IFH1P39520 1085 aa15.3■□□□□ 0.04
CCA1YER168C SSM4P40318 1319 aa15.28■□□□□ 0.04
CCA1YER168C PAN1P32521 1480 aa15.27■□□□□ 0.03
CCA1YER168C SNT2P53127 1403 aa15.24■□□□□ 0.03
CCA1YER168C TY3B-GQ99315 1547 aa15.22■□□□□ 0.03
CCA1YER168C TY1B-JR2P47100 1755 aaKnown RBP15.21■□□□□ 0.02
CCA1YER168C TY1B-ER2Q03619 1755 aa15.21■□□□□ 0.02
CCA1YER168C TY1B-MR1Q04214 1755 aa15.21■□□□□ 0.02
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms