RNA–Protein interactions for RNA: YBR265W

TSC10, Transcript of 3-ketosphinganine reductase, yeast

Gene TSC10, Length 963 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSC10	YBR265W	MSH4	P40965	878 aa	Predicted RBP	11.48	□□□□□ -0.57
TSC10	YBR265W	IOC3	P43596	787 aa		11.48	□□□□□ -0.57
TSC10	YBR265W	PCL8	Q08966	492 aa		11.48	□□□□□ -0.57
TSC10	YBR265W	FLO1	P32768	1537 aa		11.47	□□□□□ -0.57
TSC10	YBR265W	RAD53	P22216	821 aa		11.47	□□□□□ -0.57
TSC10	YBR265W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.47	□□□□□ -0.57	RIP-Chip
TSC10	YBR265W	MRPS35	P53292	345 aa		11.46	□□□□□ -0.57
TSC10	YBR265W	DUS1	P53759	423 aa	Known RBP	11.46	□□□□□ -0.57
TSC10	YBR265W	TIF6	Q12522	245 aa	Known RBP	11.46	□□□□□ -0.57
TSC10	YBR265W	HVG1	P0CE11	249 aa		11.45	□□□□□ -0.58
TSC10	YBR265W	KTR1	P27810	393 aa	Known RBP	11.45	□□□□□ -0.58
TSC10	YBR265W	KEL1	P38853	1164 aa	Known RBP	11.45	□□□□□ -0.58
TSC10	YBR265W	STM1	P39015	273 aa	Known RBP	11.45	□□□□□ -0.58
TSC10	YBR265W	GIN4	Q12263	1142 aa		11.45	□□□□□ -0.58
TSC10	YBR265W	PIB2	P53191	635 aa		11.44	□□□□□ -0.58
TSC10	YBR265W	SNU71	P53207	620 aa	Known RBP	11.44	□□□□□ -0.58
TSC10	YBR265W	NSG2	P53898	299 aa		11.44	□□□□□ -0.58
TSC10	YBR265W	YPL260W	Q08977	551 aa		11.44	□□□□□ -0.58
TSC10	YBR265W	KEL3	Q08979	651 aa	Predicted RBP	11.44	□□□□□ -0.58
TSC10	YBR265W	RAD50	P12753	1312 aa		11.43	□□□□□ -0.58
TSC10	YBR265W	YBL028C	P38202	106 aa		11.43	□□□□□ -0.58
TSC10	YBR265W	RSC30	P38781	883 aa		11.43	□□□□□ -0.58
TSC10	YBR265W	RRP8	P38961	392 aa	Known RBP	11.43	□□□□□ -0.58
TSC10	YBR265W	CST9	Q06032	482 aa		11.43	□□□□□ -0.58
TSC10	YBR265W	TAH18	Q12181	623 aa		11.43	□□□□□ -0.58
TSC10	YBR265W	TOM1	Q03280	3268 aa		11.42	□□□□□ -0.58
TSC10	YBR265W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
TSC10	YBR265W	OPI1	P21957	404 aa		11.42	□□□□□ -0.58
TSC10	YBR265W	KAR5	Q04746	504 aa		11.42	□□□□□ -0.58
TSC10	YBR265W	VAS1	P07806	1104 aa	Known RBP	11.41	□□□□□ -0.58
TSC10	YBR265W	SLN1	P39928	1220 aa	Predicted RBP	11.41	□□□□□ -0.58
TSC10	YBR265W	BBC1	P47068	1157 aa		11.41	□□□□□ -0.58
TSC10	YBR265W	RBA50	Q04418	439 aa		11.41	□□□□□ -0.58
TSC10	YBR265W	YDL124W	Q07551	312 aa	Known RBP	11.41	□□□□□ -0.58
TSC10	YBR265W	MPH3	P0CE00	602 aa		11.4	□□□□□ -0.58
TSC10	YBR265W	KIN1	P13185	1064 aa		11.4	□□□□□ -0.58
TSC10	YBR265W	MRD1	Q06106	887 aa	Known RBP	11.4	□□□□□ -0.58
TSC10	YBR265W	SRF1	Q12516	437 aa		11.4	□□□□□ -0.58
TSC10	YBR265W	APE3	P37302	537 aa	Known RBP	11.39	□□□□□ -0.59
TSC10	YBR265W	RTS1	P38903	757 aa		11.39	□□□□□ -0.59
TSC10	YBR265W	PKH3	Q03306	898 aa	Predicted RBP	11.39	□□□□□ -0.59
TSC10	YBR265W	PPM2	Q08282	695 aa		11.39	□□□□□ -0.59
TSC10	YBR265W	MET1	P36150	593 aa		11.38	□□□□□ -0.59
TSC10	YBR265W	CST26	P38226	397 aa		11.38	□□□□□ -0.59
TSC10	YBR265W	ACA1	P39970	489 aa		11.38	□□□□□ -0.59
TSC10	YBR265W	PEX29	Q03370	554 aa		11.38	□□□□□ -0.59
TSC10	YBR265W	RIM20	Q12033	661 aa		11.38	□□□□□ -0.59
TSC10	YBR265W	LAM4	P38800	1345 aa		11.37	□□□□□ -0.59
TSC10	YBR265W	TUB2	P02557	457 aa	Known RBP	11.37	□□□□□ -0.59
TSC10	YBR265W	TPM1	P17536	199 aa	Known RBP	11.37	□□□□□ -0.59
TSC10	YBR265W	OCT1	P35999	772 aa		11.37	□□□□□ -0.59
TSC10	YBR265W	JIP4	Q03361	876 aa		11.37	□□□□□ -0.59
TSC10	YBR265W	FPR4	Q06205	392 aa	Predicted RBP	11.37	□□□□□ -0.59
TSC10	YBR265W	PRE8	P23639	250 aa		11.36	□□□□□ -0.59
TSC10	YBR265W	SSF2	Q12153	453 aa	Predicted RBP	11.36	□□□□□ -0.59
TSC10	YBR265W	SRM1	P21827	482 aa		11.35	□□□□□ -0.59
TSC10	YBR265W	SUB2	Q07478	446 aa	Known RBP	11.35	□□□□□ -0.59
TSC10	YBR265W	COQ1	P18900	473 aa		11.34	□□□□□ -0.59
TSC10	YBR265W	MOT2	P34909	587 aa	Known RBP	11.34	□□□□□ -0.59
TSC10	YBR265W	VID27	P40157	782 aa		11.34	□□□□□ -0.59
TSC10	YBR265W	LYS14	P40971	790 aa		11.34	□□□□□ -0.59
TSC10	YBR265W	LAP2	Q10740	671 aa		11.34	□□□□□ -0.59
TSC10	YBR265W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.34	□□□□□ -0.59	not detected
TSC10	YBR265W	RAD61	Q99359	647 aa		11.34	□□□□□ -0.59
TSC10	YBR265W	VAB2	P40003	282 aa		11.33	□□□□□ -0.6
TSC10	YBR265W	NET1	P47035	1189 aa		11.33	□□□□□ -0.6
TSC10	YBR265W	ERG12	P07277	443 aa		11.32	□□□□□ -0.6
TSC10	YBR265W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.32	□□□□□ -0.6	not detected
TSC10	YBR265W	AAP1	P37898	856 aa	Known RBP	11.32	□□□□□ -0.6
TSC10	YBR265W	YHL050C	P38721	697 aa		11.32	□□□□□ -0.6
TSC10	YBR265W	SPR3	P41901	512 aa		11.32	□□□□□ -0.6
TSC10	YBR265W	UFD2	P54860	961 aa		11.32	□□□□□ -0.6
TSC10	YBR265W	ASH1	P34233	588 aa		11.31	□□□□□ -0.6
TSC10	YBR265W	MCD4	P36051	919 aa		11.31	□□□□□ -0.6
TSC10	YBR265W	VPS8	P39702	1274 aa		11.31	□□□□□ -0.6
TSC10	YBR265W	RPS15	Q01855	142 aa	Known RBP	11.31	□□□□□ -0.6
TSC10	YBR265W	BRN1	P38170	754 aa		11.3	□□□□□ -0.6
TSC10	YBR265W	RSM7	P47150	247 aa		11.3	□□□□□ -0.6
TSC10	YBR265W	NCS6	P53088	359 aa		11.3	□□□□□ -0.6
TSC10	YBR265W	SKG3	Q06315	1026 aa		11.3	□□□□□ -0.6
TSC10	YBR265W	CHO2	P05374	869 aa	Known RBP	11.29	□□□□□ -0.6
TSC10	YBR265W	PES4	P39684	611 aa		11.29	□□□□□ -0.6
TSC10	YBR265W	TIF4631	P39935	952 aa	Known RBP	11.29	□□□□□ -0.6
TSC10	YBR265W	SGD1	Q06132	899 aa		11.29	□□□□□ -0.6
TSC10	YBR265W	SPN1	Q06505	410 aa	Predicted RBP	11.29	□□□□□ -0.6
TSC10	YBR265W	CRG1	P38892	291 aa	RIP-Chip data	11.28	□□□□□ -0.6	not detected
TSC10	YBR265W	GCR2	Q01722	534 aa		11.28	□□□□□ -0.6
TSC10	YBR265W	PER1	P25625	357 aa		11.27	□□□□□ -0.61
TSC10	YBR265W	ERG7	P38604	731 aa		11.27	□□□□□ -0.61
TSC10	YBR265W	YLR225C	Q05948	407 aa	Known RBP	11.27	□□□□□ -0.61
TSC10	YBR265W	CFT2	Q12102	859 aa	Predicted RBP	11.27	□□□□□ -0.61
TSC10	YBR265W	FBP1	P09201	348 aa		11.26	□□□□□ -0.61
TSC10	YBR265W	RIT1	P23796	513 aa		11.26	□□□□□ -0.61
TSC10	YBR265W	YDJ1	P25491	409 aa	Known RBP	11.26	□□□□□ -0.61
TSC10	YBR265W	KRS1	P15180	591 aa	Known RBP	11.25	□□□□□ -0.61
TSC10	YBR265W	CDC60	P26637	1090 aa	Known RBP	11.25	□□□□□ -0.61
TSC10	YBR265W	CHS3	P29465	1165 aa		11.25	□□□□□ -0.61
TSC10	YBR265W	ANP1	P32629	500 aa		11.25	□□□□□ -0.61
TSC10	YBR265W	MYO3	P36006	1272 aa		11.25	□□□□□ -0.61
TSC10	YBR265W	SIS2	P36024	562 aa		11.25	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms