RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C TY1A-GR3P0CX67 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-LR1P0CX68 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-MR2P0CX69 440 aa1.27□□□□□ -2.21
RKR1YMR247C KEX2P13134 814 aa1.27□□□□□ -2.21
RKR1YMR247C GAL2P13181 574 aa1.27□□□□□ -2.21
RKR1YMR247C HEM3P28789 327 aa1.27□□□□□ -2.21
RKR1YMR247C CIC1P38779 376 aaKnown RBP1.27□□□□□ -2.21
RKR1YMR247C FIG4P42837 879 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-JR2P47099 440 aa1.27□□□□□ -2.21
RKR1YMR247C DSE4P53753 1117 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-DR1Q03856 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-ML1Q04706 440 aaKnown RBP1.27□□□□□ -2.21
RKR1YMR247C YPR084WQ06821 456 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-BRQ12217 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-NL2Q12470 440 aa1.27□□□□□ -2.21
RKR1YMR247C TY1A-GR2Q12485 440 aa1.27□□□□□ -2.21
RKR1YMR247C CYT1P07143 309 aa1.26□□□□□ -2.21
RKR1YMR247C KNS1P32350 737 aaPredicted RBP1.26□□□□□ -2.21
RKR1YMR247C FIR1P40020 876 aa1.26□□□□□ -2.21
RKR1YMR247C BDP1P46678 594 aa1.26□□□□□ -2.21
RKR1YMR247C FAR11P53917 953 aa1.26□□□□□ -2.21
RKR1YMR247C LSO1Q3E827 93 aa1.26□□□□□ -2.21
RKR1YMR247C NCL1P38205 684 aaKnown RBP1.26□□□□□ -2.21
RKR1YMR247C SLX8P40072 274 aa1.26□□□□□ -2.21
RKR1YMR247C YGR130CP53278 816 aa1.26□□□□□ -2.21
RKR1YMR247C WTM2Q12206 467 aa1.26□□□□□ -2.21
RKR1YMR247C AIM44Q99299 758 aa1.26□□□□□ -2.21
RKR1YMR247C DIT1P21623 536 aa1.26□□□□□ -2.21
RKR1YMR247C MNR2P35724 969 aa1.26□□□□□ -2.21
RKR1YMR247C HSE1P38753 452 aa1.26□□□□□ -2.21
RKR1YMR247C APC11Q12157 165 aa1.26□□□□□ -2.21
RKR1YMR247C IRE1P32361 1115 aa1.25□□□□□ -2.21
RKR1YMR247C RTG2P32608 588 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C AIM9P40053 627 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C PTK2P47116 818 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C JJJ3P47138 172 aa1.25□□□□□ -2.21
RKR1YMR247C GCV1P48015 400 aa1.25□□□□□ -2.21
RKR1YMR247C PMT7Q06644 662 aa1.25□□□□□ -2.21
RKR1YMR247C YOR296WQ08748 1289 aa1.25□□□□□ -2.21
RKR1YMR247C AI1P03875 834 aa1.25□□□□□ -2.21
RKR1YMR247C TIF1P10081 395 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C RPC82P32349 654 aa1.25□□□□□ -2.21
RKR1YMR247C TTI1P36097 1038 aa1.25□□□□□ -2.21
RKR1YMR247C LDH1P38139 375 aa1.25□□□□□ -2.21
RKR1YMR247C ISW1P38144 1129 aa1.25□□□□□ -2.21
RKR1YMR247C YJL049WP47048 450 aa1.25□□□□□ -2.21
RKR1YMR247C CWC15Q03772 175 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C MSH6Q03834 1242 aa1.25□□□□□ -2.21
RKR1YMR247C YPQ2Q06328 317 aa1.25□□□□□ -2.21
RKR1YMR247C SEC2P17065 759 aa1.25□□□□□ -2.21
RKR1YMR247C ESS1P22696 170 aa1.25□□□□□ -2.21
RKR1YMR247C ASH1P34233 588 aa1.25□□□□□ -2.21
RKR1YMR247C OSH7P38755 437 aa1.25□□□□□ -2.21
RKR1YMR247C BIM1P40013 344 aa1.25□□□□□ -2.21
RKR1YMR247C OXR1Q08952 273 aa1.25□□□□□ -2.21
RKR1YMR247C TMA46Q12000 345 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C FUR4P05316 633 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C PDR1P12383 1068 aa1.25□□□□□ -2.21
RKR1YMR247C GBP2P25555 427 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
RKR1YMR247C KAP122P32767 1081 aa1.25□□□□□ -2.21
RKR1YMR247C IRS4P36115 615 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C RPN3P40016 523 aaKnown RBP1.25□□□□□ -2.21
RKR1YMR247C NTA1P40354 457 aa1.25□□□□□ -2.21
RKR1YMR247C HNT2P49775 206 aa1.25□□□□□ -2.21
RKR1YMR247C RSC4Q02206 625 aa1.25□□□□□ -2.21
RKR1YMR247C MTC5Q03897 1148 aa1.25□□□□□ -2.21
RKR1YMR247C RPS6AP0CX37 236 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C RPS6BP0CX38 236 aaPredicted RBP1.24□□□□□ -2.21
RKR1YMR247C DAT1P13483 248 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C MCX1P38323 520 aaPredicted RBP1.24□□□□□ -2.21
RKR1YMR247C APM2P38700 605 aa1.24□□□□□ -2.21
RKR1YMR247C CEM1P39525 442 aa1.24□□□□□ -2.21
RKR1YMR247C RVS167P39743 482 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C EMP47P43555 445 aa1.24□□□□□ -2.21
RKR1YMR247C SPO71Q03868 1245 aa1.24□□□□□ -2.21
RKR1YMR247C TY1A-MR1Q04215 440 aa1.24□□□□□ -2.21
RKR1YMR247C MCD1Q12158 566 aa1.24□□□□□ -2.21
RKR1YMR247C RGP1P16664 663 aa1.24□□□□□ -2.21
RKR1YMR247C GIP1P38229 639 aa1.24□□□□□ -2.21
RKR1YMR247C RGA1P39083 1007 aa1.24□□□□□ -2.21
RKR1YMR247C SAP155P43612 1002 aa1.24□□□□□ -2.21
RKR1YMR247C JJJ2P46997 583 aa1.24□□□□□ -2.21
RKR1YMR247C YJR098CP47139 656 aa1.24□□□□□ -2.21
RKR1YMR247C ORC3P54790 616 aa1.24□□□□□ -2.21
RKR1YMR247C CDC55Q00362 526 aa1.24□□□□□ -2.21
RKR1YMR247C NOB1Q08444 459 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C LAP2Q10740 671 aa1.24□□□□□ -2.21
RKR1YMR247C PUS1Q12211 544 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C RPC31P17890 251 aa1.24□□□□□ -2.21
RKR1YMR247C TGL4P36165 910 aa1.24□□□□□ -2.21
RKR1YMR247C TPS3P38426 1054 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C MGE1P38523 228 aa1.24□□□□□ -2.21
RKR1YMR247C PAC1P39946 494 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C VPS53P47061 822 aa1.24□□□□□ -2.21
RKR1YMR247C SNU71P53207 620 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C YGR035CP53222 116 aa1.24□□□□□ -2.21
RKR1YMR247C TY1A-BLQ12266 440 aa1.24□□□□□ -2.21
RKR1YMR247C ENO2P00925 437 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C FPS1P23900 669 aa1.24□□□□□ -2.21
RKR1YMR247C NTH2P35172 780 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms