Protein–RNA interactions for Protein: P47048

YJL049W, Uncharacterized protein YJL049W, yeastyeast

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJL049WP47048 YML009W-BYML009W-B 477 nt19.73■□□□□ 0.75
YJL049WP47048 NSR1YGR159C 1245 nt19.51■□□□□ 0.71
YJL049WP47048 NOP1YDL014W 984 nt19.25■□□□□ 0.67
YJL049WP47048 YKL036CYKL036C 393 nt17.87■□□□□ 0.45
YJL049WP47048 MDJ1YFL016C 1536 nt17.17■□□□□ 0.34
YJL049WP47048 Q0297Q0297 156 nt16.87■□□□□ 0.29
YJL049WP47048 SRX1YKL086W 384 nt16.81■□□□□ 0.28
YJL049WP47048 YJL027CYJL027C 417 nt16.7■□□□□ 0.26
YJL049WP47048 SCS3YGL126W 1143 nt16.3■□□□□ 0.2
YJL049WP47048 YCR051WYCR051W 669 nt15.95■□□□□ 0.14
YJL049WP47048 YOL085CYOL085C 342 nt15.45■□□□□ 0.06
YJL049WP47048 Q0182Q0182 405 nt15.44■□□□□ 0.06
YJL049WP47048 DBP2YNL112W 1641 nt15.22■□□□□ 0.03
YJL049WP47048 PKP1YIL042C 1185 nt15.18■□□□□ 0.02
YJL049WP47048 RPP1BYDL130W 321 nt15.14■□□□□ 0.01
YJL049WP47048 TRN1tP(UGG)A 72 nt15.12■□□□□ 0.01
YJL049WP47048 SUF9tP(UGG)F 72 nt15.12■□□□□ 0.01
YJL049WP47048 SUF8tP(UGG)H 72 nt15.12■□□□□ 0.01
YJL049WP47048 tP(UGG)LtP(UGG)L 72 nt15.12■□□□□ 0.01
YJL049WP47048 SUF7tP(UGG)M 72 nt15.12■□□□□ 0.01
YJL049WP47048 tP(UGG)N1tP(UGG)N1 72 nt15.12■□□□□ 0.01
YJL049WP47048 tP(UGG)N2tP(UGG)N2 72 nt15.12■□□□□ 0.01
YJL049WP47048 tP(UGG)O1tP(UGG)O1 72 nt15.12■□□□□ 0.01
YJL049WP47048 SUF11tP(UGG)O2 72 nt15.12■□□□□ 0.01
YJL049WP47048 CCC1YLR220W 969 nt14.96□□□□□ -0.01
YJL049WP47048 MOT3YMR070W 1473 nt14.83□□□□□ -0.03
YJL049WP47048 YBR190WYBR190W 312 nt14.64□□□□□ -0.07
YJL049WP47048 SCJ1YMR214W 1134 nt14.62□□□□□ -0.07
YJL049WP47048 ATS1YAL020C 1002 nt14.61□□□□□ -0.07
YJL049WP47048 PET122YER153C 765 nt14.43□□□□□ -0.1
YJL049WP47048 RVS167YDR388W 1449 nt14.41□□□□□ -0.1
YJL049WP47048 SCR1SCR1 522 nt14.36□□□□□ -0.11
YJL049WP47048 tP(UGG)O3tP(UGG)O3 72 nt14.33□□□□□ -0.12
YJL049WP47048 RTC3YHR087W 336 nt14.32□□□□□ -0.12
YJL049WP47048 SSA3YBL075C 1950 nt14.13□□□□□ -0.15
YJL049WP47048 RRN5YLR141W 1092 nt14.03□□□□□ -0.16
YJL049WP47048 SHR5YOL110W 714 nt13.92□□□□□ -0.18
YJL049WP47048 YDJ1YNL064C 1230 nt13.89□□□□□ -0.19
YJL049WP47048 RSB1YOR049C 1065 nt13.8□□□□□ -0.2
YJL049WP47048 YER088W-BYER088W-B 147 nt13.75□□□□□ -0.21
YJL049WP47048 GAR1YHR089C 618 nt13.53□□□□□ -0.24
YJL049WP47048 PST2YDR032C 597 nt13.5□□□□□ -0.25
YJL049WP47048 DEP1YAL013W 1218 nt13.46□□□□□ -0.25
YJL049WP47048 URN1YPR152C 1398 nt13.45□□□□□ -0.26
YJL049WP47048 RPN10YHR200W 807 nt13.32□□□□□ -0.28
YJL049WP47048 YNL208WYNL208W 600 nt13.29□□□□□ -0.28
YJL049WP47048 OPI9YLR338W 858 nt13.23□□□□□ -0.29
YJL049WP47048 PUT4YOR348C 1884 nt13.16□□□□□ -0.3
YJL049WP47048 SAH1YER043C 1350 nt13.09□□□□□ -0.31
YJL049WP47048 TIR1YER011W 765 nt13.09□□□□□ -0.31
YJL049WP47048 YKL097CYKL097C 411 nt13.06□□□□□ -0.32
YJL049WP47048 ARE1YCR048W 1833 nt12.96□□□□□ -0.33
YJL049WP47048 SHU1YHL006C 453 nt12.92□□□□□ -0.34
YJL049WP47048 SSA1YAL005C 1929 nt12.88□□□□□ -0.35
YJL049WP47048 PUN1YLR414C 792 nt12.87□□□□□ -0.35
YJL049WP47048 YJR018WYJR018W 363 nt12.85□□□□□ -0.35
YJL049WP47048 YHR049C-AYHR049C-A 297 nt12.82□□□□□ -0.36
YJL049WP47048 POA1YBR022W 534 nt12.77□□□□□ -0.37
YJL049WP47048 YAL037C-BYAL037C-B 975 nt12.67□□□□□ -0.38
YJL049WP47048 PTC2YER089C 1395 nt12.66□□□□□ -0.38
YJL049WP47048 SRB2YHR041C 633 nt12.65□□□□□ -0.38
YJL049WP47048 RPP2BYDR382W 333 nt12.64□□□□□ -0.39
YJL049WP47048 YJR120WYJR120W 351 nt12.63□□□□□ -0.39
YJL049WP47048 BUD23YCR047C 828 nt12.54□□□□□ -0.4
YJL049WP47048 WWM1YFL010C 636 nt12.52□□□□□ -0.41
YJL049WP47048 YGR021WYGR021W 873 nt12.52□□□□□ -0.41
YJL049WP47048 BSC6YOL137W 1494 nt12.52□□□□□ -0.41
YJL049WP47048 NAB2YGL122C 1578 nt12.49□□□□□ -0.41
YJL049WP47048 YOR139CYOR139C 393 nt12.48□□□□□ -0.41
YJL049WP47048 HOM6YJR139C 1080 nt12.45□□□□□ -0.42
YJL049WP47048 MNP1YGL068W 585 nt12.4□□□□□ -0.42
YJL049WP47048 NPL3YDR432W 1245 nt12.39□□□□□ -0.43
YJL049WP47048 BDH2YAL061W 1254 nt12.39□□□□□ -0.43
YJL049WP47048 INM2YDR287W 879 nt12.38□□□□□ -0.43
YJL049WP47048 SSA4YER103W 1929 nt12.36□□□□□ -0.43
YJL049WP47048 SPT5YML010W 3192 nt12.35□□□□□ -0.43
YJL049WP47048 DAL1YIR027C 1383 nt12.35□□□□□ -0.43
YJL049WP47048 YFL021C-AYFL021C-A 855 nt12.34□□□□□ -0.43
YJL049WP47048 FPR4YLR449W 1179 nt12.32□□□□□ -0.44
YJL049WP47048 FIS1YIL065C 468 nt12.31□□□□□ -0.44
YJL049WP47048 YBL100CYBL100C 315 nt12.28□□□□□ -0.44
YJL049WP47048 YOL037CYOL037C 354 nt12.28□□□□□ -0.44
YJL049WP47048 RKM5YLR137W 1104 nt12.27□□□□□ -0.45
YJL049WP47048 LSM3YLR438C-A 270 nt12.26□□□□□ -0.45
YJL049WP47048 PHO4YFR034C 939 nt12.23□□□□□ -0.45
YJL049WP47048 TRM9YML014W 840 nt12.14□□□□□ -0.47
YJL049WP47048 FUN26YAL022C 1554 nt12.13□□□□□ -0.47
YJL049WP47048 RDN37-1RDN37-1 5354 nt12.09□□□□□ -0.47
YJL049WP47048 RDN37-2RDN37-2 5354 nt12.09□□□□□ -0.47
YJL049WP47048 PAC11YDR488C 1602 nt12.07□□□□□ -0.48
YJL049WP47048 CCT6YDR188W 1641 nt12□□□□□ -0.49
YJL049WP47048 tM(CAU)CtM(CAU)C 72 nt11.99□□□□□ -0.49
YJL049WP47048 IMT4tM(CAU)E 72 nt11.99□□□□□ -0.49
YJL049WP47048 IMT3tM(CAU)J3 72 nt11.99□□□□□ -0.49
YJL049WP47048 IMT1tM(CAU)O1 72 nt11.99□□□□□ -0.49
YJL049WP47048 IMT2tM(CAU)P 72 nt11.99□□□□□ -0.49
YJL049WP47048 YLR281CYLR281C 468 nt11.96□□□□□ -0.49
YJL049WP47048 ALF1YNL148C 765 nt11.95□□□□□ -0.5
YJL049WP47048 YJL225CYJL225C 5277 nt11.94□□□□□ -0.5
YJL049WP47048 YPS1YLR120C 1710 nt11.94□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms