Protein–RNA interactions for Protein: P38205

NCL1, Multisite-specific tRNA:(cytosine-C(5))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCL1P38205 YML009W-BYML009W-B 477 nt21.5■■□□□ 1.03
NCL1P38205 NSR1YGR159C 1245 nt21.49■■□□□ 1.03
NCL1P38205 NOP1YDL014W 984 nt20.78■□□□□ 0.92
NCL1P38205 MDJ1YFL016C 1536 nt19.3■□□□□ 0.68
NCL1P38205 YKL036CYKL036C 393 nt19.06■□□□□ 0.64
NCL1P38205 Q0297Q0297 156 nt18.2■□□□□ 0.5
NCL1P38205 SRX1YKL086W 384 nt18.2■□□□□ 0.5
NCL1P38205 YJL027CYJL027C 417 nt17.76■□□□□ 0.43
NCL1P38205 SCS3YGL126W 1143 nt17.3■□□□□ 0.36
NCL1P38205 YCR051WYCR051W 669 nt17.25■□□□□ 0.35
NCL1P38205 DBP2YNL112W 1641 nt17.03■□□□□ 0.32
NCL1P38205 TRN1tP(UGG)A 72 nt16.58■□□□□ 0.24
NCL1P38205 SUF9tP(UGG)F 72 nt16.58■□□□□ 0.24
NCL1P38205 SUF8tP(UGG)H 72 nt16.58■□□□□ 0.24
NCL1P38205 tP(UGG)LtP(UGG)L 72 nt16.58■□□□□ 0.24
NCL1P38205 SUF7tP(UGG)M 72 nt16.58■□□□□ 0.24
NCL1P38205 tP(UGG)N1tP(UGG)N1 72 nt16.58■□□□□ 0.24
NCL1P38205 tP(UGG)N2tP(UGG)N2 72 nt16.58■□□□□ 0.24
NCL1P38205 tP(UGG)O1tP(UGG)O1 72 nt16.58■□□□□ 0.24
NCL1P38205 SUF11tP(UGG)O2 72 nt16.58■□□□□ 0.24
NCL1P38205 YOL085CYOL085C 342 nt16.55■□□□□ 0.24
NCL1P38205 YBR190WYBR190W 312 nt16.45■□□□□ 0.22
NCL1P38205 CCC1YLR220W 969 nt16.39■□□□□ 0.21
NCL1P38205 PKP1YIL042C 1185 nt16.34■□□□□ 0.21
NCL1P38205 RPP1BYDL130W 321 nt16.31■□□□□ 0.2
NCL1P38205 RTC3YHR087W 336 nt16.06■□□□□ 0.16
NCL1P38205 SCJ1YMR214W 1134 nt15.86■□□□□ 0.13
NCL1P38205 RVS167YDR388W 1449 nt15.85■□□□□ 0.13
NCL1P38205 PET122YER153C 765 nt15.64■□□□□ 0.09
NCL1P38205 tP(UGG)O3tP(UGG)O3 72 nt15.62■□□□□ 0.09
NCL1P38205 ATS1YAL020C 1002 nt15.41■□□□□ 0.06
NCL1P38205 SCR1SCR1 522 nt15.35■□□□□ 0.05
NCL1P38205 SHR5YOL110W 714 nt15.31■□□□□ 0.04
NCL1P38205 RRN5YLR141W 1092 nt15.16■□□□□ 0.02
NCL1P38205 PUT4YOR348C 1884 nt15.1■□□□□ 0.01
NCL1P38205 YDJ1YNL064C 1230 nt15.1■□□□□ 0.01
NCL1P38205 URN1YPR152C 1398 nt14.99□□□□□ -0.01
NCL1P38205 DEP1YAL013W 1218 nt14.97□□□□□ -0.01
NCL1P38205 YER088W-BYER088W-B 147 nt14.87□□□□□ -0.03
NCL1P38205 OPI9YLR338W 858 nt14.82□□□□□ -0.04
NCL1P38205 GAR1YHR089C 618 nt14.8□□□□□ -0.04
NCL1P38205 ARE1YCR048W 1833 nt14.79□□□□□ -0.04
NCL1P38205 SAH1YER043C 1350 nt14.78□□□□□ -0.04
NCL1P38205 RSB1YOR049C 1065 nt14.77□□□□□ -0.05
NCL1P38205 RPN10YHR200W 807 nt14.68□□□□□ -0.06
NCL1P38205 YNL208WYNL208W 600 nt14.67□□□□□ -0.06
NCL1P38205 POA1YBR022W 534 nt14.6□□□□□ -0.07
NCL1P38205 YHR049C-AYHR049C-A 297 nt14.58□□□□□ -0.08
NCL1P38205 SSA3YBL075C 1950 nt14.45□□□□□ -0.1
NCL1P38205 PUN1YLR414C 792 nt14.36□□□□□ -0.11
NCL1P38205 BSC6YOL137W 1494 nt14.32□□□□□ -0.12
NCL1P38205 PST2YDR032C 597 nt14.32□□□□□ -0.12
NCL1P38205 TIR1YER011W 765 nt14.31□□□□□ -0.12
NCL1P38205 YJR018WYJR018W 363 nt14.29□□□□□ -0.12
NCL1P38205 PTC2YER089C 1395 nt14.24□□□□□ -0.13
NCL1P38205 BUD23YCR047C 828 nt14.21□□□□□ -0.13
NCL1P38205 SSA1YAL005C 1929 nt14.21□□□□□ -0.14
NCL1P38205 YJR120WYJR120W 351 nt14.13□□□□□ -0.15
NCL1P38205 NAB2YGL122C 1578 nt14.05□□□□□ -0.16
NCL1P38205 SRB2YHR041C 633 nt14.01□□□□□ -0.17
NCL1P38205 RPP2BYDR382W 333 nt13.91□□□□□ -0.18
NCL1P38205 FIS1YIL065C 468 nt13.9□□□□□ -0.18
NCL1P38205 DAL1YIR027C 1383 nt13.85□□□□□ -0.19
NCL1P38205 SPT5YML010W 3192 nt13.83□□□□□ -0.2
NCL1P38205 FPR4YLR449W 1179 nt13.8□□□□□ -0.2
NCL1P38205 SHU1YHL006C 453 nt13.79□□□□□ -0.2
NCL1P38205 INM2YDR287W 879 nt13.77□□□□□ -0.21
NCL1P38205 PHO4YFR034C 939 nt13.74□□□□□ -0.21
NCL1P38205 WWM1YFL010C 636 nt13.68□□□□□ -0.22
NCL1P38205 BDH2YAL061W 1254 nt13.65□□□□□ -0.22
NCL1P38205 YBL100CYBL100C 315 nt13.64□□□□□ -0.23
NCL1P38205 YAL037C-BYAL037C-B 975 nt13.63□□□□□ -0.23
NCL1P38205 YKL097CYKL097C 411 nt13.63□□□□□ -0.23
NCL1P38205 YPS1YLR120C 1710 nt13.53□□□□□ -0.24
NCL1P38205 HOM6YJR139C 1080 nt13.49□□□□□ -0.25
NCL1P38205 FUN26YAL022C 1554 nt13.49□□□□□ -0.25
NCL1P38205 YGR021WYGR021W 873 nt13.48□□□□□ -0.25
NCL1P38205 Q0182Q0182 405 nt13.47□□□□□ -0.25
NCL1P38205 MEP2YNL142W 1500 nt13.45□□□□□ -0.26
NCL1P38205 YDR095CYDR095C 411 nt13.43□□□□□ -0.26
NCL1P38205 YFL021C-AYFL021C-A 855 nt13.42□□□□□ -0.26
NCL1P38205 MNP1YGL068W 585 nt13.42□□□□□ -0.26
NCL1P38205 LSM3YLR438C-A 270 nt13.42□□□□□ -0.26
NCL1P38205 TRM9YML014W 840 nt13.4□□□□□ -0.26
NCL1P38205 YHR165W-AYHR165W-A 312 nt13.36□□□□□ -0.27
NCL1P38205 SSA4YER103W 1929 nt13.34□□□□□ -0.27
NCL1P38205 CCT6YDR188W 1641 nt13.29□□□□□ -0.28
NCL1P38205 RKM5YLR137W 1104 nt13.28□□□□□ -0.28
NCL1P38205 ALF1YNL148C 765 nt13.28□□□□□ -0.28
NCL1P38205 DCW1YKL046C 1350 nt13.28□□□□□ -0.28
NCL1P38205 MOT3YMR070W 1473 nt13.26□□□□□ -0.29
NCL1P38205 PTP1YDL230W 1008 nt13.18□□□□□ -0.3
NCL1P38205 YOR139CYOR139C 393 nt13.18□□□□□ -0.3
NCL1P38205 SUF2tP(AGG)C 72 nt13.15□□□□□ -0.3
NCL1P38205 SUF10tP(AGG)N 72 nt13.15□□□□□ -0.3
NCL1P38205 RPP2AYOL039W 321 nt13.15□□□□□ -0.3
NCL1P38205 SIS1YNL007C 1059 nt13.14□□□□□ -0.31
NCL1P38205 CAC2YML102W 1407 nt13.1□□□□□ -0.31
NCL1P38205 EMI2YDR516C 1503 nt13.08□□□□□ -0.32
NCL1P38205 YOL037CYOL037C 354 nt13.07□□□□□ -0.32
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms