Protein–RNA interactions for Protein: P25555

GBP2, Single-strand telomeric DNA-binding protein GBP2, yeastyeast

Known RBP RIP-Chip data

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GBP2P25555 NSR1YGR159C 1245 nt19.73■□□□□ 0.75
GBP2P25555 YML009W-BYML009W-B 477 nt19.71■□□□□ 0.75
GBP2P25555 NOP1YDL014W 984 nt19.16■□□□□ 0.66 RIP-Chip
GBP2P25555 MDJ1YFL016C 1536 nt17.57■□□□□ 0.4
GBP2P25555 YKL036CYKL036C 393 nt17.55■□□□□ 0.4
GBP2P25555 Q0297Q0297 156 nt16.73■□□□□ 0.27
GBP2P25555 SRX1YKL086W 384 nt16.73■□□□□ 0.27
GBP2P25555 YJL027CYJL027C 417 nt16.35■□□□□ 0.21
GBP2P25555 SCS3YGL126W 1143 nt15.89■□□□□ 0.13
GBP2P25555 YCR051WYCR051W 669 nt15.82■□□□□ 0.12
GBP2P25555 DBP2YNL112W 1641 nt15.51■□□□□ 0.07
GBP2P25555 TRN1tP(UGG)A 72 nt15.2■□□□□ 0.02
GBP2P25555 SUF9tP(UGG)F 72 nt15.2■□□□□ 0.02
GBP2P25555 SUF8tP(UGG)H 72 nt15.2■□□□□ 0.02
GBP2P25555 tP(UGG)LtP(UGG)L 72 nt15.2■□□□□ 0.02
GBP2P25555 SUF7tP(UGG)M 72 nt15.2■□□□□ 0.02
GBP2P25555 tP(UGG)N1tP(UGG)N1 72 nt15.2■□□□□ 0.02
GBP2P25555 tP(UGG)N2tP(UGG)N2 72 nt15.2■□□□□ 0.02
GBP2P25555 tP(UGG)O1tP(UGG)O1 72 nt15.2■□□□□ 0.02
GBP2P25555 SUF11tP(UGG)O2 72 nt15.2■□□□□ 0.02
GBP2P25555 YOL085CYOL085C 342 nt15.19■□□□□ 0.02
GBP2P25555 YBR190WYBR190W 312 nt15.06■□□□□ 0
GBP2P25555 RPP1BYDL130W 321 nt15□□□□□ -0.01
GBP2P25555 CCC1YLR220W 969 nt14.98□□□□□ -0.01
GBP2P25555 PKP1YIL042C 1185 nt14.93□□□□□ -0.02
GBP2P25555 SSA3YBL075C 1950 nt14.69□□□□□ -0.06
GBP2P25555 RTC3YHR087W 336 nt14.68□□□□□ -0.06
GBP2P25555 RVS167YDR388W 1449 nt14.6□□□□□ -0.07
GBP2P25555 SCJ1YMR214W 1134 nt14.46□□□□□ -0.09 RIP-Chip
GBP2P25555 PET122YER153C 765 nt14.32□□□□□ -0.12
GBP2P25555 tP(UGG)O3tP(UGG)O3 72 nt14.32□□□□□ -0.12
GBP2P25555 ATS1YAL020C 1002 nt14.18□□□□□ -0.14
GBP2P25555 SCR1SCR1 522 nt14.17□□□□□ -0.14
GBP2P25555 SHR5YOL110W 714 nt14.07□□□□□ -0.16
GBP2P25555 RRN5YLR141W 1092 nt13.89□□□□□ -0.19
GBP2P25555 YDJ1YNL064C 1230 nt13.89□□□□□ -0.19 RIP-Chip
GBP2P25555 PUT4YOR348C 1884 nt13.74□□□□□ -0.21
GBP2P25555 URN1YPR152C 1398 nt13.71□□□□□ -0.21
GBP2P25555 YER088W-BYER088W-B 147 nt13.63□□□□□ -0.23
GBP2P25555 DEP1YAL013W 1218 nt13.63□□□□□ -0.23 RIP-Chip
GBP2P25555 RSB1YOR049C 1065 nt13.58□□□□□ -0.24
GBP2P25555 OPI9YLR338W 858 nt13.55□□□□□ -0.24
GBP2P25555 GAR1YHR089C 618 nt13.54□□□□□ -0.24 RIP-Chip
GBP2P25555 RPN10YHR200W 807 nt13.53□□□□□ -0.24
GBP2P25555 YNL208WYNL208W 600 nt13.48□□□□□ -0.25
GBP2P25555 SAH1YER043C 1350 nt13.46□□□□□ -0.25
GBP2P25555 ARE1YCR048W 1833 nt13.45□□□□□ -0.26
GBP2P25555 YHR049C-AYHR049C-A 297 nt13.28□□□□□ -0.28
GBP2P25555 POA1YBR022W 534 nt13.27□□□□□ -0.29
GBP2P25555 PUN1YLR414C 792 nt13.18□□□□□ -0.3
GBP2P25555 PST2YDR032C 597 nt13.16□□□□□ -0.3
GBP2P25555 TIR1YER011W 765 nt13.11□□□□□ -0.31
GBP2P25555 YGR139WYGR139W 339 nt13.11□□□□□ -0.31
GBP2P25555 BSC6YOL137W 1494 nt13.1□□□□□ -0.31
GBP2P25555 SPT5YML010W 3192 nt13.1□□□□□ -0.31 RIP-Chip
GBP2P25555 YJR018WYJR018W 363 nt13.08□□□□□ -0.32
GBP2P25555 PTC2YER089C 1395 nt12.99□□□□□ -0.33
GBP2P25555 SSA4YER103W 1929 nt12.97□□□□□ -0.33
GBP2P25555 SSA1YAL005C 1929 nt12.96□□□□□ -0.34
GBP2P25555 BUD23YCR047C 828 nt12.95□□□□□ -0.34
GBP2P25555 NAB2YGL122C 1578 nt12.86□□□□□ -0.35
GBP2P25555 YJR120WYJR120W 351 nt12.84□□□□□ -0.35
GBP2P25555 RPP2BYDR382W 333 nt12.81□□□□□ -0.36
GBP2P25555 VAR1Q0140 1197 nt12.79□□□□□ -0.36
GBP2P25555 SRB2YHR041C 633 nt12.69□□□□□ -0.38
GBP2P25555 DAL1YIR027C 1383 nt12.68□□□□□ -0.38
GBP2P25555 FIS1YIL065C 468 nt12.67□□□□□ -0.38
GBP2P25555 INM2YDR287W 879 nt12.65□□□□□ -0.38
GBP2P25555 SHU1YHL006C 453 nt12.63□□□□□ -0.39
GBP2P25555 FPR4YLR449W 1179 nt12.6□□□□□ -0.39 RIP-Chip
GBP2P25555 YKL097CYKL097C 411 nt12.58□□□□□ -0.4
GBP2P25555 BDF1YLR399C 2061 nt12.57□□□□□ -0.4
GBP2P25555 PHO4YFR034C 939 nt12.55□□□□□ -0.4 RIP-Chip
GBP2P25555 BDH2YAL061W 1254 nt12.53□□□□□ -0.4
GBP2P25555 YBL100CYBL100C 315 nt12.5□□□□□ -0.41
GBP2P25555 WWM1YFL010C 636 nt12.49□□□□□ -0.41
GBP2P25555 YGR021WYGR021W 873 nt12.46□□□□□ -0.41
GBP2P25555 YAL037C-BYAL037C-B 975 nt12.43□□□□□ -0.42
GBP2P25555 HOM6YJR139C 1080 nt12.37□□□□□ -0.43
GBP2P25555 TAT1YBR069C 1860 nt12.37□□□□□ -0.43
GBP2P25555 MEP2YNL142W 1500 nt12.37□□□□□ -0.43
GBP2P25555 YFL021C-AYFL021C-A 855 nt12.35□□□□□ -0.43
GBP2P25555 LSM3YLR438C-A 270 nt12.35□□□□□ -0.43
GBP2P25555 YPS1YLR120C 1710 nt12.34□□□□□ -0.43
GBP2P25555 FUN26YAL022C 1554 nt12.34□□□□□ -0.43
GBP2P25555 TRM9YML014W 840 nt12.3□□□□□ -0.44 RIP-Chip
GBP2P25555 YDR095CYDR095C 411 nt12.27□□□□□ -0.45
GBP2P25555 MNP1YGL068W 585 nt12.26□□□□□ -0.45
GBP2P25555 YHR165W-AYHR165W-A 312 nt12.21□□□□□ -0.45
GBP2P25555 DCW1YKL046C 1350 nt12.2□□□□□ -0.46
GBP2P25555 CCT6YDR188W 1641 nt12.2□□□□□ -0.46
GBP2P25555 ALF1YNL148C 765 nt12.2□□□□□ -0.46 RIP-Chip
GBP2P25555 RKM5YLR137W 1104 nt12.19□□□□□ -0.46
GBP2P25555 PAC11YDR488C 1602 nt12.16□□□□□ -0.46
GBP2P25555 SUF2tP(AGG)C 72 nt12.12□□□□□ -0.47
GBP2P25555 SUF10tP(AGG)N 72 nt12.12□□□□□ -0.47
GBP2P25555 YOL037CYOL037C 354 nt12.08□□□□□ -0.48
GBP2P25555 YOR139CYOR139C 393 nt12.08□□□□□ -0.48
GBP2P25555 NPL3YDR432W 1245 nt12.03□□□□□ -0.48
GBP2P25555 RPP2AYOL039W 321 nt12.03□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms