Protein–RNA interactions for Protein: P10081

TIF1, ATP-dependent RNA helicase eIF4A, yeastyeast

Known RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIF1P10081 YML009W-BYML009W-B 477 nt22.17■■□□□ 1.14
TIF1P10081 NOP1YDL014W 984 nt21.71■■□□□ 1.07
TIF1P10081 NSR1YGR159C 1245 nt21.64■■□□□ 1.05
TIF1P10081 YKL036CYKL036C 393 nt20.37■□□□□ 0.85
TIF1P10081 YJL027CYJL027C 417 nt19.11■□□□□ 0.65
TIF1P10081 Q0297Q0297 156 nt19.05■□□□□ 0.64
TIF1P10081 SRX1YKL086W 384 nt18.92■□□□□ 0.62
TIF1P10081 MDJ1YFL016C 1536 nt18.85■□□□□ 0.61
TIF1P10081 SCS3YGL126W 1143 nt18.69■□□□□ 0.58
TIF1P10081 YCR051WYCR051W 669 nt18.06■□□□□ 0.48
TIF1P10081 YOL085CYOL085C 342 nt17.59■□□□□ 0.41
TIF1P10081 PKP1YIL042C 1185 nt17.33■□□□□ 0.36
TIF1P10081 RPP1BYDL130W 321 nt17.12■□□□□ 0.33
TIF1P10081 SCJ1YMR214W 1134 nt17.03■□□□□ 0.32
TIF1P10081 TRN1tP(UGG)A 72 nt16.85■□□□□ 0.29
TIF1P10081 SUF9tP(UGG)F 72 nt16.85■□□□□ 0.29
TIF1P10081 SUF8tP(UGG)H 72 nt16.85■□□□□ 0.29
TIF1P10081 tP(UGG)LtP(UGG)L 72 nt16.85■□□□□ 0.29
TIF1P10081 SUF7tP(UGG)M 72 nt16.85■□□□□ 0.29
TIF1P10081 tP(UGG)N1tP(UGG)N1 72 nt16.85■□□□□ 0.29
TIF1P10081 tP(UGG)N2tP(UGG)N2 72 nt16.85■□□□□ 0.29
TIF1P10081 tP(UGG)O1tP(UGG)O1 72 nt16.85■□□□□ 0.29
TIF1P10081 SUF11tP(UGG)O2 72 nt16.85■□□□□ 0.29
TIF1P10081 ATS1YAL020C 1002 nt16.83■□□□□ 0.28
TIF1P10081 CCC1YLR220W 969 nt16.79■□□□□ 0.28
TIF1P10081 DBP2YNL112W 1641 nt16.75■□□□□ 0.27
TIF1P10081 Q0182Q0182 405 nt16.55■□□□□ 0.24
TIF1P10081 SCR1SCR1 522 nt16.32■□□□□ 0.2
TIF1P10081 PET122YER153C 765 nt16.31■□□□□ 0.2
TIF1P10081 MOT3YMR070W 1473 nt16.3■□□□□ 0.2
TIF1P10081 tP(UGG)O3tP(UGG)O3 72 nt16.1■□□□□ 0.17
TIF1P10081 YBR190WYBR190W 312 nt16■□□□□ 0.15
TIF1P10081 RVS167YDR388W 1449 nt15.99■□□□□ 0.15
TIF1P10081 RRN5YLR141W 1092 nt15.9■□□□□ 0.14
TIF1P10081 RTC3YHR087W 336 nt15.77■□□□□ 0.12
TIF1P10081 RSB1YOR049C 1065 nt15.74■□□□□ 0.11
TIF1P10081 YER088W-BYER088W-B 147 nt15.56■□□□□ 0.08
TIF1P10081 YDJ1YNL064C 1230 nt15.55■□□□□ 0.08
TIF1P10081 PST2YDR032C 597 nt15.48■□□□□ 0.07
TIF1P10081 SHR5YOL110W 714 nt15.46■□□□□ 0.07
TIF1P10081 GAR1YHR089C 618 nt15.21■□□□□ 0.03
TIF1P10081 YKL097CYKL097C 411 nt15.16■□□□□ 0.02
TIF1P10081 DEP1YAL013W 1218 nt14.94□□□□□ -0.02
TIF1P10081 URN1YPR152C 1398 nt14.82□□□□□ -0.04
TIF1P10081 SHU1YHL006C 453 nt14.78□□□□□ -0.04
TIF1P10081 RPN10YHR200W 807 nt14.74□□□□□ -0.05
TIF1P10081 YNL208WYNL208W 600 nt14.73□□□□□ -0.05
TIF1P10081 TIR1YER011W 765 nt14.65□□□□□ -0.06
TIF1P10081 PUT4YOR348C 1884 nt14.61□□□□□ -0.07
TIF1P10081 YAL037C-BYAL037C-B 975 nt14.49□□□□□ -0.09
TIF1P10081 OPI9YLR338W 858 nt14.48□□□□□ -0.09
TIF1P10081 YOR139CYOR139C 393 nt14.39□□□□□ -0.11
TIF1P10081 SSA1YAL005C 1929 nt14.35□□□□□ -0.11
TIF1P10081 SAH1YER043C 1350 nt14.34□□□□□ -0.11
TIF1P10081 SSA3YBL075C 1950 nt14.31□□□□□ -0.12
TIF1P10081 NPL3YDR432W 1245 nt14.3□□□□□ -0.12
TIF1P10081 ARE1YCR048W 1833 nt14.26□□□□□ -0.13
TIF1P10081 YJR018WYJR018W 363 nt14.17□□□□□ -0.14
TIF1P10081 YGR021WYGR021W 873 nt14.12□□□□□ -0.15
TIF1P10081 SRB2YHR041C 633 nt14.11□□□□□ -0.15
TIF1P10081 PUN1YLR414C 792 nt14.11□□□□□ -0.15
TIF1P10081 YHR049C-AYHR049C-A 297 nt14.07□□□□□ -0.16
TIF1P10081 POA1YBR022W 534 nt14.07□□□□□ -0.16
TIF1P10081 WWM1YFL010C 636 nt14.06□□□□□ -0.16
TIF1P10081 NME1NME1 340 nt14.06□□□□□ -0.16
TIF1P10081 MNP1YGL068W 585 nt14.05□□□□□ -0.16
TIF1P10081 RPP2BYDR382W 333 nt14.04□□□□□ -0.16
TIF1P10081 HOM6YJR139C 1080 nt14.04□□□□□ -0.16
TIF1P10081 YOL037CYOL037C 354 nt13.98□□□□□ -0.17
TIF1P10081 YJR120WYJR120W 351 nt13.89□□□□□ -0.19
TIF1P10081 PTC2YER089C 1395 nt13.87□□□□□ -0.19
TIF1P10081 RKM5YLR137W 1104 nt13.85□□□□□ -0.19
TIF1P10081 BUD23YCR047C 828 nt13.84□□□□□ -0.19
TIF1P10081 BSC6YOL137W 1494 nt13.84□□□□□ -0.19
TIF1P10081 YFL021C-AYFL021C-A 855 nt13.83□□□□□ -0.2
TIF1P10081 tM(CAU)CtM(CAU)C 72 nt13.82□□□□□ -0.2
TIF1P10081 IMT4tM(CAU)E 72 nt13.82□□□□□ -0.2
TIF1P10081 IMT3tM(CAU)J3 72 nt13.82□□□□□ -0.2
TIF1P10081 IMT1tM(CAU)O1 72 nt13.82□□□□□ -0.2
TIF1P10081 IMT2tM(CAU)P 72 nt13.82□□□□□ -0.2
TIF1P10081 BDH2YAL061W 1254 nt13.76□□□□□ -0.21
TIF1P10081 NAB2YGL122C 1578 nt13.69□□□□□ -0.22
TIF1P10081 YGR139WYGR139W 339 nt13.67□□□□□ -0.22
TIF1P10081 PUS2YGL063W 1113 nt13.66□□□□□ -0.22
TIF1P10081 LSM3YLR438C-A 270 nt13.64□□□□□ -0.23
TIF1P10081 INM2YDR287W 879 nt13.61□□□□□ -0.23
TIF1P10081 YLR281CYLR281C 468 nt13.59□□□□□ -0.23
TIF1P10081 FPR4YLR449W 1179 nt13.59□□□□□ -0.23
TIF1P10081 YBL100CYBL100C 315 nt13.55□□□□□ -0.24
TIF1P10081 WHI5YOR083W 888 nt13.53□□□□□ -0.24
TIF1P10081 SPT5YML010W 3192 nt13.53□□□□□ -0.24
TIF1P10081 DAL1YIR027C 1383 nt13.51□□□□□ -0.25
TIF1P10081 TRM9YML014W 840 nt13.48□□□□□ -0.25
TIF1P10081 FIS1YIL065C 468 nt13.4□□□□□ -0.26
TIF1P10081 FUN26YAL022C 1554 nt13.38□□□□□ -0.27
TIF1P10081 PHO4YFR034C 939 nt13.37□□□□□ -0.27
TIF1P10081 FMP45YDL222C 930 nt13.31□□□□□ -0.28
TIF1P10081 DSK2YMR276W 1122 nt13.29□□□□□ -0.28
TIF1P10081 IMP2'YIL154C 1041 nt13.26□□□□□ -0.29
TIF1P10081 YLR154C-GYLR154C-G 150 nt13.25□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms