RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C SPR3P41901 512 aa8.36□□□□□ -1.07
NDE1YMR145C ZDS1P50111 915 aaKnown RBP8.36□□□□□ -1.07
NDE1YMR145C INP2Q03824 705 aa8.36□□□□□ -1.07
NDE1YMR145C RVB2Q12464 471 aaKnown RBP8.36□□□□□ -1.07
NDE1YMR145C MSM1P22438 575 aa8.35□□□□□ -1.07
NDE1YMR145C GEF1P37020 779 aa8.35□□□□□ -1.07
NDE1YMR145C EFM2P38347 419 aa8.35□□□□□ -1.07
NDE1YMR145C YLF2P38746 405 aa8.35□□□□□ -1.07
NDE1YMR145C YIR042CP40586 236 aa8.35□□□□□ -1.07
NDE1YMR145C HAP5Q02516 242 aa8.35□□□□□ -1.07
NDE1YMR145C RSC2Q06488 889 aa8.35□□□□□ -1.07
NDE1YMR145C MLP2P40457 1679 aa8.34□□□□□ -1.07
NDE1YMR145C MRPS28P21771 286 aa8.34□□□□□ -1.07
NDE1YMR145C BUD14P27637 709 aa8.34□□□□□ -1.07
NDE1YMR145C YEL1P34225 687 aa8.34□□□□□ -1.07
NDE1YMR145C RFC1P38630 861 aaKnown RBP8.34□□□□□ -1.07
NDE1YMR145C CIR2Q08822 631 aa8.34□□□□□ -1.07
NDE1YMR145C RUD3Q12234 484 aaKnown RBP8.34□□□□□ -1.07
NDE1YMR145C CDC31P06704 161 aaKnown RBP8.34□□□□□ -1.08
NDE1YMR145C SEC23P15303 768 aaKnown RBP8.34□□□□□ -1.08
NDE1YMR145C YME2P32843 850 aa8.34□□□□□ -1.08
NDE1YMR145C RRP1P35178 278 aaPredicted RBP8.34□□□□□ -1.08
NDE1YMR145C RPC37P36121 282 aa8.34□□□□□ -1.08
NDE1YMR145C ATG14P38270 344 aa8.34□□□□□ -1.08
NDE1YMR145C HEH2Q03281 663 aa8.34□□□□□ -1.08
NDE1YMR145C PBY1P38254 753 aa8.33□□□□□ -1.08
NDE1YMR145C MRX12P47084 519 aa8.33□□□□□ -1.08
NDE1YMR145C PDS5Q04264 1277 aa8.33□□□□□ -1.08
NDE1YMR145C SAC3P46674 1301 aa8.32□□□□□ -1.08
NDE1YMR145C PDR1P12383 1068 aa8.32□□□□□ -1.08
NDE1YMR145C MIC60P36112 540 aa8.32□□□□□ -1.08
NDE1YMR145C NMD3P38861 518 aaKnown RBP8.32□□□□□ -1.08
NDE1YMR145C YPL225WQ08971 146 aaKnown RBP8.32□□□□□ -1.08
NDE1YMR145C HSP42Q12329 375 aa8.32□□□□□ -1.08
NDE1YMR145C SCC2Q04002 1493 aa8.32□□□□□ -1.08
NDE1YMR145C RPP0P05317 312 aaKnown RBP8.31□□□□□ -1.08
NDE1YMR145C HIR2P32480 875 aa8.31□□□□□ -1.08
NDE1YMR145C SGT2Q12118 346 aaKnown RBP8.31□□□□□ -1.08
NDE1YMR145C WHI5Q12416 295 aa8.31□□□□□ -1.08
NDE1YMR145C CDC48P25694 835 aaKnown RBP8.3□□□□□ -1.08
NDE1YMR145C RME1P32338 300 aaKnown RBP8.3□□□□□ -1.08
NDE1YMR145C YJR008WP47085 338 aa8.3□□□□□ -1.08
NDE1YMR145C DMA2P53924 522 aa8.3□□□□□ -1.08
NDE1YMR145C YDL144CQ07589 356 aa8.3□□□□□ -1.08
NDE1YMR145C TLG2Q08144 397 aa8.3□□□□□ -1.08
NDE1YMR145C RPO31P04051 1460 aa8.3□□□□□ -1.08
NDE1YMR145C NUP157P40064 1391 aaKnown RBP8.3□□□□□ -1.08
NDE1YMR145C REV3P14284 1504 aa8.3□□□□□ -1.08
NDE1YMR145C PAN1P32521 1480 aa8.3□□□□□ -1.08
NDE1YMR145C CDC37P06101 506 aaKnown RBP8.3□□□□□ -1.08
NDE1YMR145C CYC8P14922 966 aa8.3□□□□□ -1.08
NDE1YMR145C YFR006WP43590 535 aa8.3□□□□□ -1.08
NDE1YMR145C KRE28Q04431 385 aa8.3□□□□□ -1.08
NDE1YMR145C ERB1Q04660 807 aaKnown RBP8.3□□□□□ -1.08
NDE1YMR145C AOS1Q06624 347 aa8.3□□□□□ -1.08
NDE1YMR145C SDS3P40505 327 aa8.29□□□□□ -1.08
NDE1YMR145C GIR2Q03768 265 aaPredicted RBP8.29□□□□□ -1.08
NDE1YMR145C PCL8Q08966 492 aa8.29□□□□□ -1.08
NDE1YMR145C YKL068W-AQ3E826 78 aa8.29□□□□□ -1.08
NDE1YMR145C HMG1P12683 1054 aa8.28□□□□□ -1.08
NDE1YMR145C MRC1P25588 1096 aa8.28□□□□□ -1.08
NDE1YMR145C COY1P34237 679 aa8.28□□□□□ -1.08
NDE1YMR145C SET2P46995 733 aaKnown RBP8.28□□□□□ -1.08
NDE1YMR145C KEL2P50090 882 aa8.28□□□□□ -1.08
NDE1YMR145C PRP43P53131 767 aaKnown RBP8.28□□□□□ -1.08
NDE1YMR145C NOC3Q07896 663 aaPredicted RBP8.28□□□□□ -1.08
NDE1YMR145C TFB4Q12004 338 aa8.28□□□□□ -1.08
NDE1YMR145C CDC10P25342 322 aaKnown RBP8.27□□□□□ -1.08
NDE1YMR145C HSP104P31539 908 aaKnown RBP8.27□□□□□ -1.08
NDE1YMR145C KAR9P32526 644 aa8.27□□□□□ -1.08
NDE1YMR145C UBP13P38187 747 aa8.27□□□□□ -1.08
NDE1YMR145C YCK3P39962 524 aa8.27□□□□□ -1.08
NDE1YMR145C MSN5P52918 1224 aa8.27□□□□□ -1.08
NDE1YMR145C HOT1Q03213 719 aa8.27□□□□□ -1.08
NDE1YMR145C YMR111CQ04461 462 aaPredicted RBP8.27□□□□□ -1.08
NDE1YMR145C APC5Q08683 685 aa8.27□□□□□ -1.08
NDE1YMR145C ARD1P07347 238 aaPredicted RBP8.27□□□□□ -1.09
NDE1YMR145C GAL11P19659 1081 aa8.27□□□□□ -1.09
NDE1YMR145C MRF1P30775 413 aaPredicted RBP8.27□□□□□ -1.09
NDE1YMR145C STE5P32917 917 aa8.27□□□□□ -1.09
NDE1YMR145C ARC19P33204 171 aaKnown RBP8.27□□□□□ -1.09
NDE1YMR145C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
NDE1YMR145C SSZ1P38788 538 aaKnown RBP8.27□□□□□ -1.09
NDE1YMR145C DSL1P53847 754 aa8.27□□□□□ -1.09
NDE1YMR145C RSM28Q03430 361 aa8.27□□□□□ -1.09
NDE1YMR145C MSH6Q03834 1242 aa8.27□□□□□ -1.09
NDE1YMR145C ITT1Q04638 464 aa8.27□□□□□ -1.09
NDE1YMR145C AVO1Q08236 1176 aa8.27□□□□□ -1.09
NDE1YMR145C HMI1Q12039 706 aa8.27□□□□□ -1.09
NDE1YMR145C CEX1Q12453 761 aa8.27□□□□□ -1.09
NDE1YMR145C PEX5P35056 612 aa8.26□□□□□ -1.09
NDE1YMR145C REX2P54964 269 aaKnown RBP8.26□□□□□ -1.09
NDE1YMR145C TRS33Q99394 268 aa8.26□□□□□ -1.09
NDE1YMR145C UGA3P26370 528 aa8.25□□□□□ -1.09
NDE1YMR145C TPD3P31383 635 aa8.25□□□□□ -1.09
NDE1YMR145C MET4P32389 672 aa8.25□□□□□ -1.09
NDE1YMR145C CSE1P33307 960 aa8.25□□□□□ -1.09
NDE1YMR145C ILV3P39522 585 aaKnown RBP8.25□□□□□ -1.09
NDE1YMR145C UBP12P39538 1254 aa8.25□□□□□ -1.09
NDE1YMR145C RTF1P53064 558 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 91.6 ms