Protein–RNA interactions for Protein: P12683

HMG1, 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1, yeastyeast

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HMG1P12683 NSR1YGR159C 1245 nt18.06■□□□□ 0.48
HMG1P12683 YML009W-BYML009W-B 477 nt17.92■□□□□ 0.46
HMG1P12683 NOP1YDL014W 984 nt17.55■□□□□ 0.4
HMG1P12683 YKL036CYKL036C 393 nt16.46■□□□□ 0.23
HMG1P12683 MDJ1YFL016C 1536 nt16.41■□□□□ 0.22
HMG1P12683 Q0297Q0297 156 nt15.47■□□□□ 0.07
HMG1P12683 YJL027CYJL027C 417 nt15.4■□□□□ 0.06
HMG1P12683 SRX1YKL086W 384 nt15.34■□□□□ 0.05
HMG1P12683 SCS3YGL126W 1143 nt15.12■□□□□ 0.01
HMG1P12683 SSA3YBL075C 1950 nt14.7□□□□□ -0.06
HMG1P12683 YCR051WYCR051W 669 nt14.53□□□□□ -0.08
HMG1P12683 DBP2YNL112W 1641 nt14.26□□□□□ -0.13
HMG1P12683 YOL085CYOL085C 342 nt14.23□□□□□ -0.13
HMG1P12683 YBR190WYBR190W 312 nt14.05□□□□□ -0.16
HMG1P12683 PKP1YIL042C 1185 nt13.94□□□□□ -0.18
HMG1P12683 RPP1BYDL130W 321 nt13.86□□□□□ -0.19
HMG1P12683 SCJ1YMR214W 1134 nt13.85□□□□□ -0.19
HMG1P12683 TRN1tP(UGG)A 72 nt13.84□□□□□ -0.19
HMG1P12683 SUF9tP(UGG)F 72 nt13.84□□□□□ -0.19
HMG1P12683 SUF8tP(UGG)H 72 nt13.84□□□□□ -0.19
HMG1P12683 tP(UGG)LtP(UGG)L 72 nt13.84□□□□□ -0.19
HMG1P12683 SUF7tP(UGG)M 72 nt13.84□□□□□ -0.19
HMG1P12683 tP(UGG)N1tP(UGG)N1 72 nt13.84□□□□□ -0.19
HMG1P12683 tP(UGG)N2tP(UGG)N2 72 nt13.84□□□□□ -0.19
HMG1P12683 tP(UGG)O1tP(UGG)O1 72 nt13.84□□□□□ -0.19
HMG1P12683 SUF11tP(UGG)O2 72 nt13.84□□□□□ -0.19
HMG1P12683 RTC3YHR087W 336 nt13.82□□□□□ -0.2
HMG1P12683 CCC1YLR220W 969 nt13.71□□□□□ -0.21
HMG1P12683 ATS1YAL020C 1002 nt13.61□□□□□ -0.23
HMG1P12683 Q0182Q0182 405 nt13.53□□□□□ -0.24
HMG1P12683 RVS167YDR388W 1449 nt13.46□□□□□ -0.26
HMG1P12683 PET122YER153C 765 nt13.18□□□□□ -0.3
HMG1P12683 PUT4YOR348C 1884 nt13.17□□□□□ -0.3
HMG1P12683 SCR1SCR1 522 nt13.16□□□□□ -0.3
HMG1P12683 MOT3YMR070W 1473 nt13.16□□□□□ -0.3
HMG1P12683 tP(UGG)O3tP(UGG)O3 72 nt13.03□□□□□ -0.32
HMG1P12683 SHR5YOL110W 714 nt12.85□□□□□ -0.35
HMG1P12683 RRN5YLR141W 1092 nt12.83□□□□□ -0.36
HMG1P12683 URN1YPR152C 1398 nt12.74□□□□□ -0.37
HMG1P12683 FPS1YLL043W 2010 nt12.74□□□□□ -0.37
HMG1P12683 POA1YBR022W 534 nt12.69□□□□□ -0.38
HMG1P12683 NVJ2YPR091C 2313 nt12.69□□□□□ -0.38
HMG1P12683 PAC11YDR488C 1602 nt12.69□□□□□ -0.38
HMG1P12683 SSA1YAL005C 1929 nt12.68□□□□□ -0.38
HMG1P12683 ARE1YCR048W 1833 nt12.67□□□□□ -0.38
HMG1P12683 DEP1YAL013W 1218 nt12.66□□□□□ -0.38
HMG1P12683 RSB1YOR049C 1065 nt12.66□□□□□ -0.38
HMG1P12683 YDJ1YNL064C 1230 nt12.64□□□□□ -0.39
HMG1P12683 SAH1YER043C 1350 nt12.64□□□□□ -0.39
HMG1P12683 SSA4YER103W 1929 nt12.62□□□□□ -0.39
HMG1P12683 SPT5YML010W 3192 nt12.6□□□□□ -0.39
HMG1P12683 BSC6YOL137W 1494 nt12.59□□□□□ -0.39
HMG1P12683 YER088W-BYER088W-B 147 nt12.59□□□□□ -0.39
HMG1P12683 OPI9YLR338W 858 nt12.59□□□□□ -0.39
HMG1P12683 YHR049C-AYHR049C-A 297 nt12.58□□□□□ -0.4
HMG1P12683 PST2YDR032C 597 nt12.56□□□□□ -0.4
HMG1P12683 RPN10YHR200W 807 nt12.49□□□□□ -0.41
HMG1P12683 YNL208WYNL208W 600 nt12.39□□□□□ -0.43
HMG1P12683 GAR1YHR089C 618 nt12.33□□□□□ -0.44
HMG1P12683 BUD23YCR047C 828 nt12.31□□□□□ -0.44
HMG1P12683 PUN1YLR414C 792 nt12.25□□□□□ -0.45
HMG1P12683 YKL097CYKL097C 411 nt12.23□□□□□ -0.45
HMG1P12683 BDF1YLR399C 2061 nt12.2□□□□□ -0.46
HMG1P12683 PTC2YER089C 1395 nt12.18□□□□□ -0.46
HMG1P12683 YJR018WYJR018W 363 nt12.12□□□□□ -0.47
HMG1P12683 NAB2YGL122C 1578 nt12.05□□□□□ -0.48
HMG1P12683 TAT1YBR069C 1860 nt12.04□□□□□ -0.48
HMG1P12683 SHU1YHL006C 453 nt11.96□□□□□ -0.49
HMG1P12683 TIR1YER011W 765 nt11.95□□□□□ -0.5
HMG1P12683 MEP2YNL142W 1500 nt11.91□□□□□ -0.5
HMG1P12683 FPR4YLR449W 1179 nt11.89□□□□□ -0.51
HMG1P12683 DAL1YIR027C 1383 nt11.83□□□□□ -0.52
HMG1P12683 RPP2BYDR382W 333 nt11.83□□□□□ -0.52
HMG1P12683 FIS1YIL065C 468 nt11.82□□□□□ -0.52
HMG1P12683 YJR120WYJR120W 351 nt11.78□□□□□ -0.52
HMG1P12683 INM2YDR287W 879 nt11.73□□□□□ -0.53
HMG1P12683 PHO4YFR034C 939 nt11.73□□□□□ -0.53
HMG1P12683 DCW1YKL046C 1350 nt11.68□□□□□ -0.54
HMG1P12683 YOR139CYOR139C 393 nt11.66□□□□□ -0.54
HMG1P12683 UME6YDR207C 2511 nt11.64□□□□□ -0.55
HMG1P12683 YAL037C-BYAL037C-B 975 nt11.63□□□□□ -0.55
HMG1P12683 YPS1YLR120C 1710 nt11.59□□□□□ -0.55
HMG1P12683 YBR220CYBR220C 1683 nt11.59□□□□□ -0.55
HMG1P12683 SRB2YHR041C 633 nt11.58□□□□□ -0.56
HMG1P12683 YHR165W-AYHR165W-A 312 nt11.58□□□□□ -0.56
HMG1P12683 YBL100CYBL100C 315 nt11.58□□□□□ -0.56
HMG1P12683 YMR090WYMR090W 684 nt11.53□□□□□ -0.56
HMG1P12683 EMI2YDR516C 1503 nt11.51□□□□□ -0.57
HMG1P12683 NPL3YDR432W 1245 nt11.51□□□□□ -0.57
HMG1P12683 YDR095CYDR095C 411 nt11.46□□□□□ -0.57
HMG1P12683 BDH2YAL061W 1254 nt11.46□□□□□ -0.57
HMG1P12683 YGR021WYGR021W 873 nt11.44□□□□□ -0.58
HMG1P12683 FUN26YAL022C 1554 nt11.41□□□□□ -0.58
HMG1P12683 ALF1YNL148C 765 nt11.4□□□□□ -0.58
HMG1P12683 HOM6YJR139C 1080 nt11.39□□□□□ -0.59
HMG1P12683 PCH2YBR186W 1695 nt11.39□□□□□ -0.59
HMG1P12683 SDH1YKL148C 1923 nt11.39□□□□□ -0.59
HMG1P12683 WWM1YFL010C 636 nt11.37□□□□□ -0.59
HMG1P12683 YDL221WYDL221W 552 nt11.36□□□□□ -0.59
HMG1P12683 YOL037CYOL037C 354 nt11.35□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms