RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W RRP9Q06506 573 aaKnown RBP10.35□□□□□ -0.75
SFP1YLR403W LSO1Q3E827 93 aa10.35□□□□□ -0.75
SFP1YLR403W CCM1P48237 864 aaPredicted RBP10.35□□□□□ -0.75
SFP1YLR403W MRS2Q01926 470 aa10.35□□□□□ -0.75
SFP1YLR403W SYH1Q02875 849 aaKnown RBP10.35□□□□□ -0.75
SFP1YLR403W SML1Q04964 104 aa10.35□□□□□ -0.75
SFP1YLR403W UTP4Q06679 776 aaKnown RBP10.35□□□□□ -0.75
SFP1YLR403W RPT2P40327 437 aaKnown RBP10.34□□□□□ -0.75
SFP1YLR403W MPH1P40562 993 aa10.34□□□□□ -0.75
SFP1YLR403W RTS3P53289 263 aa10.34□□□□□ -0.75
SFP1YLR403W HST2P53686 357 aa10.34□□□□□ -0.75
SFP1YLR403W YLR257WQ06146 321 aaKnown RBP10.34□□□□□ -0.75
SFP1YLR403W ESC2Q06340 456 aa10.34□□□□□ -0.75
SFP1YLR403W SWI6P09959 803 aa10.34□□□□□ -0.75
SFP1YLR403W GDE1Q02979 1223 aa10.34□□□□□ -0.75
SFP1YLR403W YNL035CP53962 389 aaKnown RBP10.33□□□□□ -0.76
SFP1YLR403W HEL2Q05580 639 aaKnown RBP10.33□□□□□ -0.76
SFP1YLR403W YPR172WQ06608 200 aa10.33□□□□□ -0.76
SFP1YLR403W SEC26P41810 973 aaKnown RBP10.32□□□□□ -0.76
SFP1YLR403W ALD2P47771 506 aa10.32□□□□□ -0.76
SFP1YLR403W TEA1P47988 759 aa10.32□□□□□ -0.76
SFP1YLR403W ATG26Q06321 1198 aa10.32□□□□□ -0.76
SFP1YLR403W SIN3P22579 1536 aa10.32□□□□□ -0.76
SFP1YLR403W PDI1P17967 522 aaKnown RBP10.32□□□□□ -0.76
SFP1YLR403W ELM1P32801 640 aa10.32□□□□□ -0.76
SFP1YLR403W AIM21P40563 679 aa10.32□□□□□ -0.76
SFP1YLR403W RAD50P12753 1312 aa10.31□□□□□ -0.76
SFP1YLR403W RPL17AP05740 184 aaKnown RBP10.3□□□□□ -0.76
SFP1YLR403W RPG1P38249 964 aaKnown RBP10.3□□□□□ -0.76
SFP1YLR403W TOM71P38825 639 aaKnown RBP10.3□□□□□ -0.76
SFP1YLR403W INP52P50942 1183 aa10.3□□□□□ -0.76
SFP1YLR403W MEH1Q02205 184 aa10.3□□□□□ -0.76
SFP1YLR403W BRE1Q07457 700 aaKnown RBP10.3□□□□□ -0.76
SFP1YLR403W RTT107P38850 1070 aa10.3□□□□□ -0.76
SFP1YLR403W IES2P40154 320 aa10.3□□□□□ -0.76
SFP1YLR403W TIM11P81449 96 aaPredicted RBP10.3□□□□□ -0.76
SFP1YLR403W YML119WQ03208 357 aa10.3□□□□□ -0.76
SFP1YLR403W NUP145P49687 1317 aa10.29□□□□□ -0.76
SFP1YLR403W MAK11P20484 414 aaKnown RBP10.29□□□□□ -0.76
SFP1YLR403W SEC6P32844 805 aa10.29□□□□□ -0.76
SFP1YLR403W BNI4P53858 892 aa10.29□□□□□ -0.76
SFP1YLR403W ARO80Q04052 950 aa10.29□□□□□ -0.76
SFP1YLR403W YDR338CQ05497 695 aa10.29□□□□□ -0.76
SFP1YLR403W NKP1Q12493 238 aa10.29□□□□□ -0.76
SFP1YLR403W NUP170P38181 1502 aa10.27□□□□□ -0.76
SFP1YLR403W THR4P16120 514 aaKnown RBP10.27□□□□□ -0.76
SFP1YLR403W MCM2P29469 868 aa10.27□□□□□ -0.76
SFP1YLR403W TY4A-JP47023 414 aa10.27□□□□□ -0.76
SFP1YLR403W ZDS1P50111 915 aaKnown RBP10.27□□□□□ -0.76
SFP1YLR403W VTC3Q02725 835 aa10.27□□□□□ -0.76
SFP1YLR403W LCD1Q04377 747 aa10.27□□□□□ -0.76
SFP1YLR403W WHI5Q12416 295 aa10.27□□□□□ -0.76
SFP1YLR403W SEC23P15303 768 aaKnown RBP10.27□□□□□ -0.77
SFP1YLR403W YEF3P16521 1044 aaKnown RBP10.27□□□□□ -0.77
SFP1YLR403W KDX1P36005 433 aa10.27□□□□□ -0.77
SFP1YLR403W GDT1P38301 280 aaPredicted RBP10.27□□□□□ -0.77
SFP1YLR403W SFI1Q12369 946 aa10.27□□□□□ -0.77
SFP1YLR403W APC2Q12440 853 aa10.27□□□□□ -0.77
SFP1YLR403W SEC14P24280 304 aaKnown RBP10.26□□□□□ -0.77
SFP1YLR403W EXO84P38261 753 aa10.26□□□□□ -0.77
SFP1YLR403W GYP7P48365 746 aa10.26□□□□□ -0.77
SFP1YLR403W YNL247WP53852 767 aaKnown RBP10.26□□□□□ -0.77
SFP1YLR403W CIR2Q08822 631 aa10.26□□□□□ -0.77
SFP1YLR403W RIO2P40160 425 aaKnown RBP10.26□□□□□ -0.77
SFP1YLR403W UBX2Q04228 584 aa10.26□□□□□ -0.77
SFP1YLR403W MLP2P40457 1679 aa10.25□□□□□ -0.77
SFP1YLR403W TIF3P34167 436 aaKnown RBP10.25□□□□□ -0.77
SFP1YLR403W YRB1P41920 201 aaKnown RBP10.25□□□□□ -0.77
SFP1YLR403W ARP5P53946 755 aa10.25□□□□□ -0.77
SFP1YLR403W GEF1P37020 779 aa10.24□□□□□ -0.77
SFP1YLR403W SAP1P39955 897 aaKnown RBP10.24□□□□□ -0.77
SFP1YLR403W HOS2P53096 452 aaPredicted RBP10.24□□□□□ -0.77
SFP1YLR403W RTC1Q08281 1341 aa10.24□□□□□ -0.77
SFP1YLR403W EFM2P38347 419 aa10.24□□□□□ -0.77
SFP1YLR403W VPS41P38959 992 aa10.24□□□□□ -0.77
SFP1YLR403W SUM1P46676 1062 aa10.24□□□□□ -0.77
SFP1YLR403W SHE4P51534 789 aa10.24□□□□□ -0.77
SFP1YLR403W BNI5P53890 448 aaKnown RBP10.24□□□□□ -0.77
SFP1YLR403W SPO19Q03029 223 aa10.24□□□□□ -0.77
SFP1YLR403W VMS1Q04311 632 aaKnown RBP10.24□□□□□ -0.77
SFP1YLR403W PDR1P12383 1068 aa10.23□□□□□ -0.77
SFP1YLR403W EFB1P32471 206 aaKnown RBP10.23□□□□□ -0.77
SFP1YLR403W ERC1P38767 581 aa10.23□□□□□ -0.77
SFP1YLR403W SPR3P41901 512 aa10.23□□□□□ -0.77
SFP1YLR403W ADE12P80210 433 aaKnown RBP10.23□□□□□ -0.77
SFP1YLR403W DNA2P38859 1522 aa10.23□□□□□ -0.77
SFP1YLR403W MYO2P19524 1574 aaKnown RBP10.23□□□□□ -0.77
SFP1YLR403W NMD3P38861 518 aaKnown RBP10.22□□□□□ -0.77
SFP1YLR403W DMA2P53924 522 aa10.22□□□□□ -0.77
SFP1YLR403W CDC3P32457 520 aaKnown RBP10.22□□□□□ -0.77
SFP1YLR403W IST1P53843 298 aaPredicted RBP10.22□□□□□ -0.77
SFP1YLR403W MRD1Q06106 887 aaKnown RBP10.22□□□□□ -0.77
SFP1YLR403W SLX4Q12098 748 aa10.22□□□□□ -0.77
SFP1YLR403W FAR1P21268 830 aa10.21□□□□□ -0.77
SFP1YLR403W MSH1P25846 959 aa10.21□□□□□ -0.77
SFP1YLR403W RME1P32338 300 aaKnown RBP10.21□□□□□ -0.77
SFP1YLR403W BTN2P53286 410 aa10.21□□□□□ -0.77
SFP1YLR403W RSC2Q06488 889 aa10.21□□□□□ -0.77
SFP1YLR403W BRR1Q99177 341 aaPredicted RBP10.21□□□□□ -0.77
SFP1YLR403W YLF2P38746 405 aa10.21□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms