RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C RAV1P47104 1357 aa3.29□□□□□ -1.88
PRP8YHR165C ATG36P46983 293 aa3.29□□□□□ -1.88
PRP8YHR165C YLR257WQ06146 321 aaKnown RBP3.29□□□□□ -1.88
PRP8YHR165C RTP1Q12751 981 aa3.28□□□□□ -1.88
PRP8YHR165C SSA1P10591 642 aaKnown RBP3.28□□□□□ -1.88
PRP8YHR165C SSA2P10592 639 aaKnown RBP3.28□□□□□ -1.88
PRP8YHR165C SIR4P11978 1358 aa3.28□□□□□ -1.88
PRP8YHR165C RRP15Q06511 250 aaPredicted RBP3.28□□□□□ -1.89
PRP8YHR165C PLP2Q12017 286 aa3.28□□□□□ -1.89
PRP8YHR165C GIN4Q12263 1142 aa3.28□□□□□ -1.89
PRP8YHR165C NOP58Q12499 511 aaKnown RBP3.28□□□□□ -1.89
PRP8YHR165C NMD2P38798 1089 aaKnown RBP3.27□□□□□ -1.89
PRP8YHR165C SMC2P38989 1170 aaKnown RBP3.27□□□□□ -1.89
PRP8YHR165C RAD2P07276 1031 aa3.27□□□□□ -1.89
PRP8YHR165C DJP1P40564 432 aa3.27□□□□□ -1.89
PRP8YHR165C IMP2'P32351 346 aa3.27□□□□□ -1.89
PRP8YHR165C PAM1P37304 830 aaKnown RBP3.26□□□□□ -1.89
PRP8YHR165C REI1P38344 393 aaPredicted RBP3.26□□□□□ -1.89
PRP8YHR165C SRB7P47822 140 aa3.26□□□□□ -1.89
PRP8YHR165C RRP43P25359 394 aaPredicted RBP3.26□□□□□ -1.89
PRP8YHR165C YTA6P40328 754 aa3.26□□□□□ -1.89
PRP8YHR165C LCD1Q04377 747 aa3.26□□□□□ -1.89
PRP8YHR165C GLE1Q12315 538 aa3.26□□□□□ -1.89
PRP8YHR165C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
PRP8YHR165C YBL028CP38202 106 aa3.26□□□□□ -1.89
PRP8YHR165C HUL5P53119 910 aa3.26□□□□□ -1.89
PRP8YHR165C SYH1Q02875 849 aaKnown RBP3.26□□□□□ -1.89
PRP8YHR165C PUF6Q04373 656 aaKnown RBP3.26□□□□□ -1.89
PRP8YHR165C MPP10P47083 593 aaKnown RBP3.26□□□□□ -1.89
PRP8YHR165C YPR097WQ06839 1073 aa3.26□□□□□ -1.89
PRP8YHR165C FUN30P31380 1131 aa3.25□□□□□ -1.89
PRP8YHR165C SPT21P35209 758 aa3.25□□□□□ -1.89
PRP8YHR165C HPC2Q01448 625 aa3.25□□□□□ -1.89
PRP8YHR165C SWH1P35845 1188 aa3.25□□□□□ -1.89
PRP8YHR165C SSO2P39926 295 aa3.25□□□□□ -1.89
PRP8YHR165C RRP9Q06506 573 aaKnown RBP3.25□□□□□ -1.89
PRP8YHR165C ICL2Q12031 575 aa3.25□□□□□ -1.89
PRP8YHR165C OSH2Q12451 1283 aa3.25□□□□□ -1.89
PRP8YHR165C ATP4P05626 244 aa3.25□□□□□ -1.89
PRP8YHR165C NFU1P32860 256 aa3.25□□□□□ -1.89
PRP8YHR165C BOI2P39969 1040 aa3.25□□□□□ -1.89
PRP8YHR165C PAP2P53632 584 aaKnown RBP3.25□□□□□ -1.89
PRP8YHR165C RRP8P38961 392 aaKnown RBP3.25□□□□□ -1.89
PRP8YHR165C TAF13P11747 167 aa3.25□□□□□ -1.89
PRP8YHR165C RRI2Q12348 645 aa3.25□□□□□ -1.89
PRP8YHR165C IME2P32581 645 aa3.24□□□□□ -1.89
PRP8YHR165C YGR130CP53278 816 aa3.24□□□□□ -1.89
PRP8YHR165C TSR1Q07381 788 aaKnown RBP3.24□□□□□ -1.89
PRP8YHR165C NUP157P40064 1391 aaKnown RBP3.24□□□□□ -1.89
PRP8YHR165C CLB3P24870 427 aa3.24□□□□□ -1.89
PRP8YHR165C TAF1P46677 1066 aa3.24□□□□□ -1.89
PRP8YHR165C VMR1P38735 1592 aa3.24□□□□□ -1.89
PRP8YHR165C YBT1P32386 1661 aa3.24□□□□□ -1.89
PRP8YHR165C OPY1P38271 328 aa3.24□□□□□ -1.89
PRP8YHR165C SPT7P35177 1332 aa3.24□□□□□ -1.89
PRP8YHR165C NNF2P53253 936 aa3.24□□□□□ -1.89
PRP8YHR165C YJL049WP47048 450 aa3.23□□□□□ -1.89
PRP8YHR165C MGR3Q04472 501 aa3.23□□□□□ -1.89
PRP8YHR165C KAR2P16474 682 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C DSF2P38213 736 aa3.23□□□□□ -1.89
PRP8YHR165C ESC2Q06340 456 aa3.23□□□□□ -1.89
PRP8YHR165C RTC1Q08281 1341 aa3.23□□□□□ -1.89
PRP8YHR165C TRZ1P36159 838 aaPredicted RBP3.23□□□□□ -1.89
PRP8YHR165C SEC9P40357 651 aa3.23□□□□□ -1.89
PRP8YHR165C SPT5P27692 1063 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C BMS1Q08965 1183 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C CLF1Q12309 687 aaPredicted RBP3.23□□□□□ -1.89
PRP8YHR165C CFT1Q06632 1357 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C PWP2P25635 923 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C HAL5P38970 855 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C IMH1Q06704 911 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C BRE1Q07457 700 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C RRP14P36080 434 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C POL5P39985 1022 aaKnown RBP3.23□□□□□ -1.89
PRP8YHR165C GPN2Q08726 347 aaPredicted RBP3.23□□□□□ -1.89
PRP8YHR165C SET1P38827 1080 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C LAM1P38851 1228 aa3.22□□□□□ -1.89
PRP8YHR165C PUS4P48567 403 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C RMD1Q03441 430 aa3.22□□□□□ -1.89
PRP8YHR165C TSR2Q06672 205 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C TY1B-DR3Q99231 1755 aa3.22□□□□□ -1.89
PRP8YHR165C DNF1P32660 1571 aa3.22□□□□□ -1.89
PRP8YHR165C NOC2P39744 710 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C DPS1P04802 557 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C MEI5P32489 222 aa3.22□□□□□ -1.89
PRP8YHR165C VMS1Q04311 632 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C TMA64Q04600 565 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C POB3Q04636 552 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C NMD3P38861 518 aaKnown RBP3.22□□□□□ -1.89
PRP8YHR165C RRP1P35178 278 aaPredicted RBP3.22□□□□□ -1.89
PRP8YHR165C TFB3Q03290 321 aa3.22□□□□□ -1.89
PRP8YHR165C YOR093CQ12275 1648 aa3.22□□□□□ -1.89
PRP8YHR165C LTE1P07866 1435 aa3.22□□□□□ -1.89
PRP8YHR165C MRX12P47084 519 aa3.22□□□□□ -1.89
PRP8YHR165C ENT3P47160 408 aa3.22□□□□□ -1.89
PRP8YHR165C RUD3Q12234 484 aaKnown RBP3.21□□□□□ -1.9
PRP8YHR165C TPO2P53283 614 aa3.21□□□□□ -1.9
PRP8YHR165C NIP1P32497 812 aaKnown RBP3.21□□□□□ -1.9
PRP8YHR165C PET123P17558 318 aa3.21□□□□□ -1.9
PRP8YHR165C PEX5P35056 612 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms