Protein–RNA interactions for Protein: Q12348

RRI2, COP9 signalosome complex subunit 10, yeastyeast

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI2Q12348 YML009W-BYML009W-B 477 nt24.56■■□□□ 1.52
RRI2Q12348 NSR1YGR159C 1245 nt24.29■■□□□ 1.48
RRI2Q12348 NOP1YDL014W 984 nt23.99■■□□□ 1.43
RRI2Q12348 YKL036CYKL036C 393 nt22.32■■□□□ 1.16
RRI2Q12348 MDJ1YFL016C 1536 nt21.34■■□□□ 1.01
RRI2Q12348 Q0297Q0297 156 nt21.09■□□□□ 0.97
RRI2Q12348 SRX1YKL086W 384 nt20.98■□□□□ 0.95
RRI2Q12348 YJL027CYJL027C 417 nt20.85■□□□□ 0.93
RRI2Q12348 SCS3YGL126W 1143 nt20.41■□□□□ 0.86
RRI2Q12348 YCR051WYCR051W 669 nt19.87■□□□□ 0.77
RRI2Q12348 YOL085CYOL085C 342 nt19.33■□□□□ 0.68
RRI2Q12348 DBP2YNL112W 1641 nt19■□□□□ 0.63
RRI2Q12348 PKP1YIL042C 1185 nt18.97■□□□□ 0.63
RRI2Q12348 RPP1BYDL130W 321 nt18.91■□□□□ 0.62
RRI2Q12348 TRN1tP(UGG)A 72 nt18.85■□□□□ 0.61
RRI2Q12348 SUF9tP(UGG)F 72 nt18.85■□□□□ 0.61
RRI2Q12348 SUF8tP(UGG)H 72 nt18.85■□□□□ 0.61
RRI2Q12348 tP(UGG)LtP(UGG)L 72 nt18.85■□□□□ 0.61
RRI2Q12348 SUF7tP(UGG)M 72 nt18.85■□□□□ 0.61
RRI2Q12348 tP(UGG)N1tP(UGG)N1 72 nt18.85■□□□□ 0.61
RRI2Q12348 tP(UGG)N2tP(UGG)N2 72 nt18.85■□□□□ 0.61
RRI2Q12348 tP(UGG)O1tP(UGG)O1 72 nt18.85■□□□□ 0.61
RRI2Q12348 SUF11tP(UGG)O2 72 nt18.85■□□□□ 0.61
RRI2Q12348 CCC1YLR220W 969 nt18.6■□□□□ 0.57
RRI2Q12348 SCJ1YMR214W 1134 nt18.38■□□□□ 0.53
RRI2Q12348 ATS1YAL020C 1002 nt18.32■□□□□ 0.52
RRI2Q12348 YBR190WYBR190W 312 nt18.18■□□□□ 0.5
RRI2Q12348 PET122YER153C 765 nt18.03■□□□□ 0.48
RRI2Q12348 tP(UGG)O3tP(UGG)O3 72 nt17.89■□□□□ 0.45
RRI2Q12348 SCR1SCR1 522 nt17.89■□□□□ 0.45
RRI2Q12348 RVS167YDR388W 1449 nt17.89■□□□□ 0.45
RRI2Q12348 RTC3YHR087W 336 nt17.73■□□□□ 0.43
RRI2Q12348 RRN5YLR141W 1092 nt17.53■□□□□ 0.4
RRI2Q12348 YDJ1YNL064C 1230 nt17.34■□□□□ 0.37
RRI2Q12348 SHR5YOL110W 714 nt17.32■□□□□ 0.36
RRI2Q12348 RSB1YOR049C 1065 nt17.21■□□□□ 0.35
RRI2Q12348 YER088W-BYER088W-B 147 nt17.2■□□□□ 0.34
RRI2Q12348 PST2YDR032C 597 nt16.95■□□□□ 0.3
RRI2Q12348 GAR1YHR089C 618 nt16.86■□□□□ 0.29
RRI2Q12348 DEP1YAL013W 1218 nt16.71■□□□□ 0.27
RRI2Q12348 URN1YPR152C 1398 nt16.7■□□□□ 0.26
RRI2Q12348 RPN10YHR200W 807 nt16.52■□□□□ 0.24
RRI2Q12348 YNL208WYNL208W 600 nt16.52■□□□□ 0.24
RRI2Q12348 OPI9YLR338W 858 nt16.44■□□□□ 0.22
RRI2Q12348 YKL097CYKL097C 411 nt16.36■□□□□ 0.21
RRI2Q12348 PUT4YOR348C 1884 nt16.35■□□□□ 0.21
RRI2Q12348 TIR1YER011W 765 nt16.31■□□□□ 0.2
RRI2Q12348 SAH1YER043C 1350 nt16.26■□□□□ 0.19
RRI2Q12348 SHU1YHL006C 453 nt16.19■□□□□ 0.18
RRI2Q12348 ARE1YCR048W 1833 nt16.1■□□□□ 0.17
RRI2Q12348 SSA1YAL005C 1929 nt16.07■□□□□ 0.16
RRI2Q12348 PUN1YLR414C 792 nt15.96■□□□□ 0.15
RRI2Q12348 YJR018WYJR018W 363 nt15.95■□□□□ 0.14
RRI2Q12348 YHR049C-AYHR049C-A 297 nt15.88■□□□□ 0.13
RRI2Q12348 SRB2YHR041C 633 nt15.84■□□□□ 0.13
RRI2Q12348 YAL037C-BYAL037C-B 975 nt15.84■□□□□ 0.13
RRI2Q12348 POA1YBR022W 534 nt15.82■□□□□ 0.12
RRI2Q12348 YJR120WYJR120W 351 nt15.78■□□□□ 0.12
RRI2Q12348 PTC2YER089C 1395 nt15.7■□□□□ 0.1
RRI2Q12348 RPP2BYDR382W 333 nt15.67■□□□□ 0.1
RRI2Q12348 YOR139CYOR139C 393 nt15.67■□□□□ 0.1
RRI2Q12348 WWM1YFL010C 636 nt15.61■□□□□ 0.09
RRI2Q12348 YGR021WYGR021W 873 nt15.61■□□□□ 0.09
RRI2Q12348 HOM6YJR139C 1080 nt15.57■□□□□ 0.08
RRI2Q12348 BUD23YCR047C 828 nt15.51■□□□□ 0.07
RRI2Q12348 MNP1YGL068W 585 nt15.49■□□□□ 0.07
RRI2Q12348 NAB2YGL122C 1578 nt15.49■□□□□ 0.07
RRI2Q12348 NPL3YDR432W 1245 nt15.48■□□□□ 0.07
RRI2Q12348 BSC6YOL137W 1494 nt15.45■□□□□ 0.06
RRI2Q12348 BDH2YAL061W 1254 nt15.42■□□□□ 0.06
RRI2Q12348 SSA3YBL075C 1950 nt15.42■□□□□ 0.06
RRI2Q12348 YFL021C-AYFL021C-A 855 nt15.39■□□□□ 0.05
RRI2Q12348 INM2YDR287W 879 nt15.38■□□□□ 0.05
RRI2Q12348 YOL037CYOL037C 354 nt15.35■□□□□ 0.05
RRI2Q12348 RKM5YLR137W 1104 nt15.33■□□□□ 0.04
RRI2Q12348 DAL1YIR027C 1383 nt15.33■□□□□ 0.04
RRI2Q12348 FIS1YIL065C 468 nt15.3■□□□□ 0.04
RRI2Q12348 LSM3YLR438C-A 270 nt15.27■□□□□ 0.04
RRI2Q12348 FPR4YLR449W 1179 nt15.24■□□□□ 0.03
RRI2Q12348 YBL100CYBL100C 315 nt15.23■□□□□ 0.03
RRI2Q12348 PHO4YFR034C 939 nt15.17■□□□□ 0.02
RRI2Q12348 FUN26YAL022C 1554 nt15.07■□□□□ 0
RRI2Q12348 TRM9YML014W 840 nt15.07■□□□□ 0
RRI2Q12348 tM(CAU)CtM(CAU)C 72 nt15.06■□□□□ 0
RRI2Q12348 IMT4tM(CAU)E 72 nt15.06■□□□□ 0
RRI2Q12348 IMT3tM(CAU)J3 72 nt15.06■□□□□ 0
RRI2Q12348 IMT1tM(CAU)O1 72 nt15.06■□□□□ 0
RRI2Q12348 IMT2tM(CAU)P 72 nt15.06■□□□□ 0
RRI2Q12348 YLR281CYLR281C 468 nt14.97□□□□□ -0.01
RRI2Q12348 CCT6YDR188W 1641 nt14.94□□□□□ -0.02
RRI2Q12348 WHI5YOR083W 888 nt14.88□□□□□ -0.03
RRI2Q12348 PUS2YGL063W 1113 nt14.86□□□□□ -0.03
RRI2Q12348 YPS1YLR120C 1710 nt14.82□□□□□ -0.04
RRI2Q12348 ALF1YNL148C 765 nt14.8□□□□□ -0.04
RRI2Q12348 YDR095CYDR095C 411 nt14.78□□□□□ -0.04
RRI2Q12348 SUF2tP(AGG)C 72 nt14.78□□□□□ -0.04
RRI2Q12348 SUF10tP(AGG)N 72 nt14.78□□□□□ -0.04
RRI2Q12348 YLR154C-GYLR154C-G 150 nt14.72□□□□□ -0.05
RRI2Q12348 YHR165W-AYHR165W-A 312 nt14.61□□□□□ -0.07
RRI2Q12348 SIS1YNL007C 1059 nt14.61□□□□□ -0.07
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms