Protein–RNA interactions for Protein: P32497

NIP1, Eukaryotic translation initiation factor 3 subunit C, yeastyeast

Known RBP Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP1P32497 NSR1YGR159C 1245 nt20.15■□□□□ 0.82
NIP1P32497 YML009W-BYML009W-B 477 nt19.85■□□□□ 0.77
NIP1P32497 NOP1YDL014W 984 nt19■□□□□ 0.63
NIP1P32497 MDJ1YFL016C 1536 nt18.54■□□□□ 0.56
NIP1P32497 YKL036CYKL036C 393 nt17.48■□□□□ 0.39
NIP1P32497 YJL027CYJL027C 417 nt17.04■□□□□ 0.32
NIP1P32497 SRX1YKL086W 384 nt16.57■□□□□ 0.24
NIP1P32497 Q0297Q0297 156 nt16.44■□□□□ 0.22
NIP1P32497 DBP2YNL112W 1641 nt16.09■□□□□ 0.17
NIP1P32497 SCS3YGL126W 1143 nt16.02■□□□□ 0.16
NIP1P32497 YBR190WYBR190W 312 nt15.89■□□□□ 0.13
NIP1P32497 YCR051WYCR051W 669 nt15.77■□□□□ 0.12
NIP1P32497 RTC3YHR087W 336 nt15.62■□□□□ 0.09
NIP1P32497 SSA3YBL075C 1950 nt15.37■□□□□ 0.05
NIP1P32497 TRN1tP(UGG)A 72 nt15.33■□□□□ 0.04
NIP1P32497 SUF9tP(UGG)F 72 nt15.33■□□□□ 0.04
NIP1P32497 SUF8tP(UGG)H 72 nt15.33■□□□□ 0.04
NIP1P32497 tP(UGG)LtP(UGG)L 72 nt15.33■□□□□ 0.04
NIP1P32497 SUF7tP(UGG)M 72 nt15.33■□□□□ 0.04
NIP1P32497 tP(UGG)N1tP(UGG)N1 72 nt15.33■□□□□ 0.04
NIP1P32497 tP(UGG)N2tP(UGG)N2 72 nt15.33■□□□□ 0.04
NIP1P32497 tP(UGG)O1tP(UGG)O1 72 nt15.33■□□□□ 0.04
NIP1P32497 SUF11tP(UGG)O2 72 nt15.33■□□□□ 0.04
NIP1P32497 CCC1YLR220W 969 nt15.3■□□□□ 0.04
NIP1P32497 YOL085CYOL085C 342 nt15.09■□□□□ 0.01
NIP1P32497 RVS167YDR388W 1449 nt15.04■□□□□ -0
NIP1P32497 PUT4YOR348C 1884 nt14.9□□□□□ -0.02
NIP1P32497 SCJ1YMR214W 1134 nt14.82□□□□□ -0.04
NIP1P32497 PKP1YIL042C 1185 nt14.77□□□□□ -0.05
NIP1P32497 RPP1BYDL130W 321 nt14.74□□□□□ -0.05
NIP1P32497 ARE1YCR048W 1833 nt14.45□□□□□ -0.1
NIP1P32497 POA1YBR022W 534 nt14.45□□□□□ -0.1
NIP1P32497 ATS1YAL020C 1002 nt14.4□□□□□ -0.1
NIP1P32497 URN1YPR152C 1398 nt14.36□□□□□ -0.11
NIP1P32497 SAH1YER043C 1350 nt14.34□□□□□ -0.11
NIP1P32497 SHR5YOL110W 714 nt14.34□□□□□ -0.11
NIP1P32497 tP(UGG)O3tP(UGG)O3 72 nt14.33□□□□□ -0.12
NIP1P32497 YHR049C-AYHR049C-A 297 nt14.32□□□□□ -0.12
NIP1P32497 DEP1YAL013W 1218 nt14.25□□□□□ -0.13
NIP1P32497 OPI9YLR338W 858 nt14.22□□□□□ -0.13
NIP1P32497 BSC6YOL137W 1494 nt14.22□□□□□ -0.13
NIP1P32497 PET122YER153C 765 nt14.18□□□□□ -0.14
NIP1P32497 BUD23YCR047C 828 nt14□□□□□ -0.17
NIP1P32497 SCR1SCR1 522 nt14□□□□□ -0.17
NIP1P32497 RPN10YHR200W 807 nt13.97□□□□□ -0.17
NIP1P32497 SPT5YML010W 3192 nt13.89□□□□□ -0.19
NIP1P32497 YNL208WYNL208W 600 nt13.86□□□□□ -0.19
NIP1P32497 YDJ1YNL064C 1230 nt13.82□□□□□ -0.2
NIP1P32497 PUN1YLR414C 792 nt13.8□□□□□ -0.2
NIP1P32497 PTC2YER089C 1395 nt13.79□□□□□ -0.2
NIP1P32497 SSA4YER103W 1929 nt13.77□□□□□ -0.21
NIP1P32497 GAR1YHR089C 618 nt13.71□□□□□ -0.21
NIP1P32497 RRN5YLR141W 1092 nt13.7□□□□□ -0.22
NIP1P32497 NAB2YGL122C 1578 nt13.66□□□□□ -0.22
NIP1P32497 YJR018WYJR018W 363 nt13.65□□□□□ -0.22
NIP1P32497 RSB1YOR049C 1065 nt13.44□□□□□ -0.26
NIP1P32497 FPR4YLR449W 1179 nt13.43□□□□□ -0.26
NIP1P32497 YER088W-BYER088W-B 147 nt13.42□□□□□ -0.26
NIP1P32497 FIS1YIL065C 468 nt13.39□□□□□ -0.27
NIP1P32497 MEP2YNL142W 1500 nt13.39□□□□□ -0.27
NIP1P32497 DAL1YIR027C 1383 nt13.37□□□□□ -0.27
NIP1P32497 PST2YDR032C 597 nt13.29□□□□□ -0.28
NIP1P32497 YJR120WYJR120W 351 nt13.26□□□□□ -0.29
NIP1P32497 BDF1YLR399C 2061 nt13.26□□□□□ -0.29
NIP1P32497 PHO4YFR034C 939 nt13.25□□□□□ -0.29
NIP1P32497 TIR1YER011W 765 nt13.24□□□□□ -0.29
NIP1P32497 SSA1YAL005C 1929 nt13.21□□□□□ -0.29
NIP1P32497 RPP2BYDR382W 333 nt13.21□□□□□ -0.29
NIP1P32497 DCW1YKL046C 1350 nt13.2□□□□□ -0.3
NIP1P32497 INM2YDR287W 879 nt13.2□□□□□ -0.3
NIP1P32497 YPS1YLR120C 1710 nt13.19□□□□□ -0.3
NIP1P32497 YHR165W-AYHR165W-A 312 nt13.14□□□□□ -0.31
NIP1P32497 TAT1YBR069C 1860 nt13.06□□□□□ -0.32
NIP1P32497 YBL100CYBL100C 315 nt13.02□□□□□ -0.33
NIP1P32497 EMI2YDR516C 1503 nt12.99□□□□□ -0.33
NIP1P32497 YDR095CYDR095C 411 nt12.99□□□□□ -0.33
NIP1P32497 YMR090WYMR090W 684 nt12.96□□□□□ -0.33
NIP1P32497 YKL097CYKL097C 411 nt12.94□□□□□ -0.34
NIP1P32497 YBR220CYBR220C 1683 nt12.93□□□□□ -0.34
NIP1P32497 SRB2YHR041C 633 nt12.88□□□□□ -0.35
NIP1P32497 FUN26YAL022C 1554 nt12.84□□□□□ -0.35
NIP1P32497 YDL221WYDL221W 552 nt12.83□□□□□ -0.36
NIP1P32497 CAC2YML102W 1407 nt12.81□□□□□ -0.36
NIP1P32497 BDH2YAL061W 1254 nt12.81□□□□□ -0.36
NIP1P32497 ALF1YNL148C 765 nt12.81□□□□□ -0.36
NIP1P32497 SDH1YKL148C 1923 nt12.78□□□□□ -0.36
NIP1P32497 RPP2AYOL039W 321 nt12.77□□□□□ -0.37
NIP1P32497 PTP1YDL230W 1008 nt12.75□□□□□ -0.37
NIP1P32497 TRM9YML014W 840 nt12.71□□□□□ -0.37
NIP1P32497 PAC11YDR488C 1602 nt12.68□□□□□ -0.38
NIP1P32497 SHU1YHL006C 453 nt12.66□□□□□ -0.38
NIP1P32497 SCC4YER147C 1875 nt12.64□□□□□ -0.39
NIP1P32497 IRC15YPL017C 1500 nt12.59□□□□□ -0.39
NIP1P32497 WWM1YFL010C 636 nt12.58□□□□□ -0.4
NIP1P32497 PCH2YBR186W 1695 nt12.57□□□□□ -0.4
NIP1P32497 CCT6YDR188W 1641 nt12.56□□□□□ -0.4
NIP1P32497 SIS1YNL007C 1059 nt12.55□□□□□ -0.4
NIP1P32497 GIS3YLR094C 1509 nt12.55□□□□□ -0.4
NIP1P32497 SUF2tP(AGG)C 72 nt12.52□□□□□ -0.41
NIP1P32497 SUF10tP(AGG)N 72 nt12.52□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms