RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C RQC2Q12532 1038 aaKnown RBP4.79□□□□□ -1.64
PRP8YHR165C SPA2P23201 1466 aaKnown RBP4.44□□□□□ -1.7
PRP8YHR165C INO80P53115 1489 aa4.36□□□□□ -1.71
PRP8YHR165C SKI3P17883 1432 aaKnown RBP4.28□□□□□ -1.72
PRP8YHR165C AIM44Q99299 758 aa4.21□□□□□ -1.74
PRP8YHR165C CHD1P32657 1468 aa4.21□□□□□ -1.74
PRP8YHR165C TFA1P36100 482 aa4.2□□□□□ -1.74
PRP8YHR165C SSN2P38931 1420 aa4.15□□□□□ -1.74
PRP8YHR165C SGS1P35187 1447 aa4.12□□□□□ -1.75
PRP8YHR165C XRN1P22147 1528 aaKnown RBP3.98□□□□□ -1.77
PRP8YHR165C RSE1Q04693 1361 aaKnown RBP3.98□□□□□ -1.77
PRP8YHR165C TCB3Q03640 1545 aaKnown RBP3.96□□□□□ -1.78
PRP8YHR165C MTC1P47018 478 aaKnown RBP3.92□□□□□ -1.78
PRP8YHR165C NUP170P38181 1502 aa3.92□□□□□ -1.78
PRP8YHR165C TAF7Q05021 590 aa3.92□□□□□ -1.78
PRP8YHR165C SIN3P22579 1536 aa3.92□□□□□ -1.78
PRP8YHR165C MNN4P36044 1178 aa3.91□□□□□ -1.78
PRP8YHR165C SPT6P23615 1451 aaKnown RBP3.9□□□□□ -1.78
PRP8YHR165C ECM5Q03214 1411 aa3.88□□□□□ -1.79
PRP8YHR165C DRS1P32892 752 aaKnown RBP3.84□□□□□ -1.79
PRP8YHR165C MMS22Q06164 1454 aa3.84□□□□□ -1.8
PRP8YHR165C FPR3P38911 411 aaKnown RBP3.83□□□□□ -1.8
PRP8YHR165C NAB3P38996 802 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
PRP8YHR165C TY1B-DR4Q07793 1604 aa3.81□□□□□ -1.8
PRP8YHR165C SPP41P38904 1435 aa3.81□□□□□ -1.8
PRP8YHR165C SAS10Q12136 610 aaPredicted RBP3.81□□□□□ -1.8
PRP8YHR165C UFD4P33202 1483 aa3.79□□□□□ -1.8
PRP8YHR165C MYO4P32492 1471 aa3.78□□□□□ -1.8
PRP8YHR165C RNA1P11745 407 aaKnown RBP3.77□□□□□ -1.81
PRP8YHR165C PDR5P33302 1511 aaKnown RBP3.77□□□□□ -1.81
PRP8YHR165C PSH1Q12161 406 aa3.77□□□□□ -1.81
PRP8YHR165C PDR10P51533 1564 aa3.77□□□□□ -1.81
PRP8YHR165C POL1P13382 1468 aa3.77□□□□□ -1.81
PRP8YHR165C YRB30P53107 440 aaPredicted RBP3.76□□□□□ -1.81
PRP8YHR165C BFR2Q06631 534 aaKnown RBP3.76□□□□□ -1.81
PRP8YHR165C RLP24Q07915 199 aaKnown RBP3.75□□□□□ -1.81
PRP8YHR165C AVT3P36062 692 aa3.75□□□□□ -1.81
PRP8YHR165C FUN12P39730 1002 aaKnown RBP3.75□□□□□ -1.81
PRP8YHR165C HSL1P34244 1518 aa3.75□□□□□ -1.81
PRP8YHR165C TOP1P04786 769 aa3.72□□□□□ -1.81
PRP8YHR165C LEO1P38439 464 aa3.71□□□□□ -1.82
PRP8YHR165C YPK9Q12697 1472 aa3.71□□□□□ -1.82
PRP8YHR165C ORC1P54784 914 aaPredicted RBP3.71□□□□□ -1.82
PRP8YHR165C YTA7P40340 1379 aa3.71□□□□□ -1.82
PRP8YHR165C IOC4Q04213 475 aa3.7□□□□□ -1.82
PRP8YHR165C QCR6P00127 147 aa3.69□□□□□ -1.82
PRP8YHR165C SSK2P53599 1579 aa3.69□□□□□ -1.82
PRP8YHR165C DNA2P38859 1522 aa3.68□□□□□ -1.82
PRP8YHR165C DOS2P54858 310 aa3.68□□□□□ -1.82
PRP8YHR165C PEP1P32319 1579 aa3.68□□□□□ -1.82
PRP8YHR165C STU1P38198 1513 aa3.68□□□□□ -1.82
PRP8YHR165C MYO2P19524 1574 aaKnown RBP3.67□□□□□ -1.82
PRP8YHR165C SMC4Q12267 1418 aa3.67□□□□□ -1.82
PRP8YHR165C LEU3P08638 886 aa3.67□□□□□ -1.82
PRP8YHR165C CAB3P36076 571 aa3.66□□□□□ -1.82
PRP8YHR165C RPO31P04051 1460 aa3.65□□□□□ -1.82
PRP8YHR165C IKI3Q06706 1349 aaKnown RBP3.64□□□□□ -1.83
PRP8YHR165C STH1P32597 1359 aa3.63□□□□□ -1.83
PRP8YHR165C IRC20Q06554 1556 aa3.63□□□□□ -1.83
PRP8YHR165C REV3P14284 1504 aa3.63□□□□□ -1.83
PRP8YHR165C IFH1P39520 1085 aa3.63□□□□□ -1.83
PRP8YHR165C IQG1Q12280 1495 aa3.62□□□□□ -1.83
PRP8YHR165C ASF1P32447 279 aa3.62□□□□□ -1.83
PRP8YHR165C THO2P53552 1597 aaKnown RBP3.61□□□□□ -1.83
PRP8YHR165C YLR419WQ06698 1435 aaKnown RBP3.6□□□□□ -1.83
PRP8YHR165C HIR3P47171 1648 aa3.6□□□□□ -1.83
PRP8YHR165C TRM732Q03496 1420 aa3.6□□□□□ -1.83
PRP8YHR165C YOR1P53049 1477 aa3.6□□□□□ -1.83
PRP8YHR165C NAP1P25293 417 aaKnown RBP3.59□□□□□ -1.83
PRP8YHR165C JIP3O13555 125 aa3.59□□□□□ -1.84
PRP8YHR165C NOP8Q08287 484 aaPredicted RBP3.58□□□□□ -1.84
PRP8YHR165C SNT2P53127 1403 aa3.57□□□□□ -1.84
PRP8YHR165C SPB4P25808 606 aaPredicted RBP3.57□□□□□ -1.84
PRP8YHR165C MFT1P33441 392 aaKnown RBP3.57□□□□□ -1.84
PRP8YHR165C TOP2P06786 1428 aaKnown RBP3.57□□□□□ -1.84
PRP8YHR165C MET5P47169 1442 aa3.57□□□□□ -1.84
PRP8YHR165C HSC82P15108 705 aaKnown RBP3.56□□□□□ -1.84
PRP8YHR165C SEC3P33332 1336 aaKnown RBP3.56□□□□□ -1.84
PRP8YHR165C BUD4P47136 1447 aa3.54□□□□□ -1.84
PRP8YHR165C SCC2Q04002 1493 aa3.54□□□□□ -1.84
PRP8YHR165C MON2P48563 1636 aaPredicted RBP3.54□□□□□ -1.84
PRP8YHR165C NOP7P53261 605 aaKnown RBP3.53□□□□□ -1.84
PRP8YHR165C HAP1P0CE41 1502 aa3.53□□□□□ -1.84
PRP8YHR165C SRB8P25648 1427 aa3.52□□□□□ -1.85
PRP8YHR165C SUB1P54000 292 aaKnown RBP3.52□□□□□ -1.85
PRP8YHR165C ENP1P38333 483 aaKnown RBP3.51□□□□□ -1.85
PRP8YHR165C YCF1P39109 1515 aaKnown RBP3.51□□□□□ -1.85
PRP8YHR165C GEA1P47102 1408 aaPredicted RBP3.51□□□□□ -1.85
PRP8YHR165C CEF1Q03654 590 aaPredicted RBP3.5□□□□□ -1.85
PRP8YHR165C YRF1-4O13559 1382 aa3.5□□□□□ -1.85
PRP8YHR165C YML133CQ03099 1374 aa3.5□□□□□ -1.85
PRP8YHR165C YLL067CQ07888 1374 aa3.5□□□□□ -1.85
PRP8YHR165C YLL066CQ99208 1374 aa3.5□□□□□ -1.85
PRP8YHR165C SPT2P06843 333 aaPredicted RBP3.5□□□□□ -1.85
PRP8YHR165C SNQ2P32568 1501 aaKnown RBP3.49□□□□□ -1.85
PRP8YHR165C SVF1Q05515 481 aa3.49□□□□□ -1.85
PRP8YHR165C TRM3Q07527 1436 aa3.49□□□□□ -1.85
PRP8YHR165C DEF1P35732 738 aaKnown RBP3.49□□□□□ -1.85
PRP8YHR165C NUP159P40477 1460 aa3.48□□□□□ -1.85
PRP8YHR165C RPS0BP46654 252 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms