Protein–RNA interactions for Protein: P25359

RRP43, Exosome complex component RRP43, yeastyeast

Predicted RBP Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP43P25359 NSR1YGR159C 1245 nt21.93■■□□□ 1.1
RRP43P25359 YML009W-BYML009W-B 477 nt21.68■■□□□ 1.06
RRP43P25359 NOP1YDL014W 984 nt20.87■□□□□ 0.93
RRP43P25359 MDJ1YFL016C 1536 nt19.87■□□□□ 0.77
RRP43P25359 YKL036CYKL036C 393 nt18.93■□□□□ 0.62
RRP43P25359 SRX1YKL086W 384 nt18.31■□□□□ 0.52
RRP43P25359 Q0297Q0297 156 nt18.24■□□□□ 0.51
RRP43P25359 YJL027CYJL027C 417 nt18.23■□□□□ 0.51
RRP43P25359 DBP2YNL112W 1641 nt17.53■□□□□ 0.4
RRP43P25359 YCR051WYCR051W 669 nt17.27■□□□□ 0.36
RRP43P25359 SCS3YGL126W 1143 nt17.08■□□□□ 0.32
RRP43P25359 YBR190WYBR190W 312 nt17.03■□□□□ 0.32
RRP43P25359 TRN1tP(UGG)A 72 nt16.83■□□□□ 0.28
RRP43P25359 SUF9tP(UGG)F 72 nt16.83■□□□□ 0.28
RRP43P25359 SUF8tP(UGG)H 72 nt16.83■□□□□ 0.28
RRP43P25359 tP(UGG)LtP(UGG)L 72 nt16.83■□□□□ 0.28
RRP43P25359 SUF7tP(UGG)M 72 nt16.83■□□□□ 0.28
RRP43P25359 tP(UGG)N1tP(UGG)N1 72 nt16.83■□□□□ 0.28
RRP43P25359 tP(UGG)N2tP(UGG)N2 72 nt16.83■□□□□ 0.28
RRP43P25359 tP(UGG)O1tP(UGG)O1 72 nt16.83■□□□□ 0.28
RRP43P25359 SUF11tP(UGG)O2 72 nt16.83■□□□□ 0.28
RRP43P25359 CCC1YLR220W 969 nt16.56■□□□□ 0.24
RRP43P25359 RTC3YHR087W 336 nt16.54■□□□□ 0.24
RRP43P25359 YOL085CYOL085C 342 nt16.46■□□□□ 0.23
RRP43P25359 RPP1BYDL130W 321 nt16.34■□□□□ 0.21
RRP43P25359 PKP1YIL042C 1185 nt16.22■□□□□ 0.19
RRP43P25359 SCJ1YMR214W 1134 nt16.19■□□□□ 0.18
RRP43P25359 RVS167YDR388W 1449 nt16.19■□□□□ 0.18
RRP43P25359 PUT4YOR348C 1884 nt15.87■□□□□ 0.13
RRP43P25359 SSA3YBL075C 1950 nt15.8■□□□□ 0.12
RRP43P25359 tP(UGG)O3tP(UGG)O3 72 nt15.76■□□□□ 0.11
RRP43P25359 PET122YER153C 765 nt15.69■□□□□ 0.1
RRP43P25359 SHR5YOL110W 714 nt15.61■□□□□ 0.09
RRP43P25359 ARE1YCR048W 1833 nt15.45■□□□□ 0.06
RRP43P25359 URN1YPR152C 1398 nt15.41■□□□□ 0.06
RRP43P25359 SAH1YER043C 1350 nt15.3■□□□□ 0.04
RRP43P25359 OPI9YLR338W 858 nt15.3■□□□□ 0.04
RRP43P25359 SCR1SCR1 522 nt15.3■□□□□ 0.04
RRP43P25359 DEP1YAL013W 1218 nt15.27■□□□□ 0.04
RRP43P25359 YDJ1YNL064C 1230 nt15.26■□□□□ 0.03
RRP43P25359 POA1YBR022W 534 nt15.25■□□□□ 0.03
RRP43P25359 YHR049C-AYHR049C-A 297 nt15.17■□□□□ 0.02
RRP43P25359 RRN5YLR141W 1092 nt15.17■□□□□ 0.02
RRP43P25359 ATS1YAL020C 1002 nt15.16■□□□□ 0.02
RRP43P25359 BSC6YOL137W 1494 nt15.02■□□□□ -0
RRP43P25359 RPN10YHR200W 807 nt15.01□□□□□ -0.01
RRP43P25359 YNL208WYNL208W 600 nt14.99□□□□□ -0.01
RRP43P25359 GAR1YHR089C 618 nt14.94□□□□□ -0.02
RRP43P25359 YER088W-BYER088W-B 147 nt14.89□□□□□ -0.03
RRP43P25359 SPT5YML010W 3192 nt14.84□□□□□ -0.03
RRP43P25359 PUN1YLR414C 792 nt14.8□□□□□ -0.04
RRP43P25359 BUD23YCR047C 828 nt14.72□□□□□ -0.05
RRP43P25359 PTC2YER089C 1395 nt14.71□□□□□ -0.06
RRP43P25359 RSB1YOR049C 1065 nt14.68□□□□□ -0.06
RRP43P25359 YJR018WYJR018W 363 nt14.66□□□□□ -0.06
RRP43P25359 NAB2YGL122C 1578 nt14.57□□□□□ -0.08
RRP43P25359 YJR120WYJR120W 351 nt14.51□□□□□ -0.09
RRP43P25359 TIR1YER011W 765 nt14.48□□□□□ -0.09
RRP43P25359 SSA1YAL005C 1929 nt14.45□□□□□ -0.1
RRP43P25359 FIS1YIL065C 468 nt14.41□□□□□ -0.1
RRP43P25359 SSA4YER103W 1929 nt14.35□□□□□ -0.11
RRP43P25359 DAL1YIR027C 1383 nt14.31□□□□□ -0.12
RRP43P25359 SRB2YHR041C 633 nt14.23□□□□□ -0.13
RRP43P25359 PHO4YFR034C 939 nt14.19□□□□□ -0.14
RRP43P25359 RPP2BYDR382W 333 nt14.18□□□□□ -0.14
RRP43P25359 FPR4YLR449W 1179 nt14.18□□□□□ -0.14
RRP43P25359 INM2YDR287W 879 nt14.17□□□□□ -0.14
RRP43P25359 MEP2YNL142W 1500 nt14.16□□□□□ -0.14
RRP43P25359 PST2YDR032C 597 nt14.15□□□□□ -0.14
RRP43P25359 YPS1YLR120C 1710 nt14.1□□□□□ -0.15
RRP43P25359 YBL100CYBL100C 315 nt13.99□□□□□ -0.17
RRP43P25359 DCW1YKL046C 1350 nt13.96□□□□□ -0.18
RRP43P25359 YDR095CYDR095C 411 nt13.94□□□□□ -0.18
RRP43P25359 BDH2YAL061W 1254 nt13.93□□□□□ -0.18
RRP43P25359 BDF1YLR399C 2061 nt13.92□□□□□ -0.18
RRP43P25359 YHR165W-AYHR165W-A 312 nt13.86□□□□□ -0.19
RRP43P25359 FUN26YAL022C 1554 nt13.83□□□□□ -0.19
RRP43P25359 WWM1YFL010C 636 nt13.79□□□□□ -0.2
RRP43P25359 PTP1YDL230W 1008 nt13.73□□□□□ -0.21
RRP43P25359 EMI2YDR516C 1503 nt13.72□□□□□ -0.21
RRP43P25359 TAT1YBR069C 1860 nt13.7□□□□□ -0.22
RRP43P25359 CAC2YML102W 1407 nt13.67□□□□□ -0.22
RRP43P25359 LSM3YLR438C-A 270 nt13.67□□□□□ -0.22
RRP43P25359 TRM9YML014W 840 nt13.67□□□□□ -0.22
RRP43P25359 YBR220CYBR220C 1683 nt13.66□□□□□ -0.22
RRP43P25359 SHU1YHL006C 453 nt13.65□□□□□ -0.22
RRP43P25359 CCT6YDR188W 1641 nt13.64□□□□□ -0.23
RRP43P25359 RPP2AYOL039W 321 nt13.63□□□□□ -0.23
RRP43P25359 ALF1YNL148C 765 nt13.62□□□□□ -0.23
RRP43P25359 YDL221WYDL221W 552 nt13.61□□□□□ -0.23
RRP43P25359 YFL021C-AYFL021C-A 855 nt13.56□□□□□ -0.24
RRP43P25359 SIS1YNL007C 1059 nt13.56□□□□□ -0.24
RRP43P25359 HOM6YJR139C 1080 nt13.55□□□□□ -0.24
RRP43P25359 YGR021WYGR021W 873 nt13.54□□□□□ -0.24
RRP43P25359 YAL037C-BYAL037C-B 975 nt13.54□□□□□ -0.24
RRP43P25359 YMR090WYMR090W 684 nt13.54□□□□□ -0.24
RRP43P25359 SDH1YKL148C 1923 nt13.52□□□□□ -0.24
RRP43P25359 IRC15YPL017C 1500 nt13.48□□□□□ -0.25
RRP43P25359 SUF2tP(AGG)C 72 nt13.45□□□□□ -0.26
RRP43P25359 SUF10tP(AGG)N 72 nt13.45□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms