Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 YML009W-BYML009W-B 477 nt29.7■■■□□ 2.35
VMR1P38735 NOP1YDL014W 984 nt28.52■■■□□ 2.16
VMR1P38735 NSR1YGR159C 1245 nt28.5■■■□□ 2.15
VMR1P38735 YKL036CYKL036C 393 nt27.12■■□□□ 1.93
VMR1P38735 YJL027CYJL027C 417 nt25.43■■□□□ 1.66
VMR1P38735 MDJ1YFL016C 1536 nt25.4■■□□□ 1.66
VMR1P38735 Q0297Q0297 156 nt25.33■■□□□ 1.65
VMR1P38735 SRX1YKL086W 384 nt25.22■■□□□ 1.63
VMR1P38735 SCS3YGL126W 1143 nt25.21■■□□□ 1.63
VMR1P38735 YCR051WYCR051W 669 nt24.05■■□□□ 1.44
VMR1P38735 YOL085CYOL085C 342 nt23.4■■□□□ 1.34
VMR1P38735 PKP1YIL042C 1185 nt23.31■■□□□ 1.32
VMR1P38735 SCJ1YMR214W 1134 nt22.77■■□□□ 1.24
VMR1P38735 RPP1BYDL130W 321 nt22.74■■□□□ 1.23
VMR1P38735 TRN1tP(UGG)A 72 nt22.63■■□□□ 1.21
VMR1P38735 SUF9tP(UGG)F 72 nt22.63■■□□□ 1.21
VMR1P38735 SUF8tP(UGG)H 72 nt22.63■■□□□ 1.21
VMR1P38735 tP(UGG)LtP(UGG)L 72 nt22.63■■□□□ 1.21
VMR1P38735 SUF7tP(UGG)M 72 nt22.63■■□□□ 1.21
VMR1P38735 tP(UGG)N1tP(UGG)N1 72 nt22.63■■□□□ 1.21
VMR1P38735 tP(UGG)N2tP(UGG)N2 72 nt22.63■■□□□ 1.21
VMR1P38735 tP(UGG)O1tP(UGG)O1 72 nt22.63■■□□□ 1.21
VMR1P38735 SUF11tP(UGG)O2 72 nt22.63■■□□□ 1.21
VMR1P38735 DBP2YNL112W 1641 nt22.57■■□□□ 1.2
VMR1P38735 ATS1YAL020C 1002 nt22.42■■□□□ 1.18
VMR1P38735 CCC1YLR220W 969 nt22.34■■□□□ 1.17
VMR1P38735 PET122YER153C 765 nt21.95■■□□□ 1.1
VMR1P38735 SCR1SCR1 522 nt21.54■■□□□ 1.04
VMR1P38735 tP(UGG)O3tP(UGG)O3 72 nt21.47■■□□□ 1.03
VMR1P38735 RRN5YLR141W 1092 nt21.13■□□□□ 0.97
VMR1P38735 RVS167YDR388W 1449 nt21.06■□□□□ 0.96
VMR1P38735 YBR190WYBR190W 312 nt21.06■□□□□ 0.96
VMR1P38735 RSB1YOR049C 1065 nt21.02■□□□□ 0.96
VMR1P38735 RTC3YHR087W 336 nt20.94■□□□□ 0.94
VMR1P38735 YER088W-BYER088W-B 147 nt20.76■□□□□ 0.91
VMR1P38735 PST2YDR032C 597 nt20.63■□□□□ 0.89
VMR1P38735 YDJ1YNL064C 1230 nt20.58■□□□□ 0.88
VMR1P38735 SHR5YOL110W 714 nt20.56■□□□□ 0.88
VMR1P38735 YKL097CYKL097C 411 nt20.3■□□□□ 0.84
VMR1P38735 GAR1YHR089C 618 nt20.25■□□□□ 0.83
VMR1P38735 DEP1YAL013W 1218 nt20.06■□□□□ 0.8
VMR1P38735 SHU1YHL006C 453 nt19.92■□□□□ 0.78
VMR1P38735 URN1YPR152C 1398 nt19.78■□□□□ 0.76
VMR1P38735 YAL037C-BYAL037C-B 975 nt19.56■□□□□ 0.72
VMR1P38735 YOR139CYOR139C 393 nt19.5■□□□□ 0.71
VMR1P38735 TIR1YER011W 765 nt19.49■□□□□ 0.71
VMR1P38735 YNL208WYNL208W 600 nt19.44■□□□□ 0.7
VMR1P38735 SRB2YHR041C 633 nt19.36■□□□□ 0.69
VMR1P38735 RPN10YHR200W 807 nt19.34■□□□□ 0.69
VMR1P38735 SSA1YAL005C 1929 nt19.25■□□□□ 0.67
VMR1P38735 OPI9YLR338W 858 nt19.2■□□□□ 0.66
VMR1P38735 MNP1YGL068W 585 nt19.18■□□□□ 0.66
VMR1P38735 SAH1YER043C 1350 nt19.13■□□□□ 0.65
VMR1P38735 NPL3YDR432W 1245 nt19.06■□□□□ 0.64
VMR1P38735 YJR120WYJR120W 351 nt18.96■□□□□ 0.63
VMR1P38735 WWM1YFL010C 636 nt18.9■□□□□ 0.62
VMR1P38735 PUT4YOR348C 1884 nt18.87■□□□□ 0.61
VMR1P38735 HOM6YJR139C 1080 nt18.84■□□□□ 0.61
VMR1P38735 ARE1YCR048W 1833 nt18.8■□□□□ 0.6
VMR1P38735 YJR018WYJR018W 363 nt18.77■□□□□ 0.6
VMR1P38735 YHR049C-AYHR049C-A 297 nt18.73■□□□□ 0.59
VMR1P38735 YGR021WYGR021W 873 nt18.72■□□□□ 0.59
VMR1P38735 YOL037CYOL037C 354 nt18.69■□□□□ 0.58
VMR1P38735 PUN1YLR414C 792 nt18.59■□□□□ 0.57
VMR1P38735 RKM5YLR137W 1104 nt18.54■□□□□ 0.56
VMR1P38735 SSA3YBL075C 1950 nt18.51■□□□□ 0.55
VMR1P38735 tM(CAU)CtM(CAU)C 72 nt18.44■□□□□ 0.54
VMR1P38735 IMT4tM(CAU)E 72 nt18.44■□□□□ 0.54
VMR1P38735 IMT3tM(CAU)J3 72 nt18.44■□□□□ 0.54
VMR1P38735 IMT1tM(CAU)O1 72 nt18.44■□□□□ 0.54
VMR1P38735 IMT2tM(CAU)P 72 nt18.44■□□□□ 0.54
VMR1P38735 RPP2BYDR382W 333 nt18.42■□□□□ 0.54
VMR1P38735 YFL021C-AYFL021C-A 855 nt18.38■□□□□ 0.53
VMR1P38735 PTC2YER089C 1395 nt18.35■□□□□ 0.53
VMR1P38735 POA1YBR022W 534 nt18.34■□□□□ 0.53
VMR1P38735 BDH2YAL061W 1254 nt18.27■□□□□ 0.52
VMR1P38735 BUD23YCR047C 828 nt18.23■□□□□ 0.51
VMR1P38735 PUS2YGL063W 1113 nt18.21■□□□□ 0.51
VMR1P38735 FIS1YIL065C 468 nt18.17■□□□□ 0.5
VMR1P38735 MOT3YMR070W 1473 nt18.15■□□□□ 0.5
VMR1P38735 YLR281CYLR281C 468 nt18.13■□□□□ 0.49
VMR1P38735 YBL100CYBL100C 315 nt18.05■□□□□ 0.48
VMR1P38735 WHI5YOR083W 888 nt18.05■□□□□ 0.48
VMR1P38735 YLR236CYLR236C 324 nt18.04■□□□□ 0.48
VMR1P38735 NAB2YGL122C 1578 nt17.96■□□□□ 0.47
VMR1P38735 FPR4YLR449W 1179 nt17.96■□□□□ 0.46
VMR1P38735 BSC6YOL137W 1494 nt17.94■□□□□ 0.46
VMR1P38735 PHO4YFR034C 939 nt17.94■□□□□ 0.46
VMR1P38735 FMP45YDL222C 930 nt17.9■□□□□ 0.46
VMR1P38735 YPR011CYPR011C 981 nt17.89■□□□□ 0.45
VMR1P38735 DAL1YIR027C 1383 nt17.87■□□□□ 0.45
VMR1P38735 LSM3YLR438C-A 270 nt17.84■□□□□ 0.45
VMR1P38735 DSK2YMR276W 1122 nt17.77■□□□□ 0.44
VMR1P38735 INM2YDR287W 879 nt17.74■□□□□ 0.43
VMR1P38735 FUN26YAL022C 1554 nt17.74■□□□□ 0.43
VMR1P38735 YLR154C-GYLR154C-G 150 nt17.7■□□□□ 0.42
VMR1P38735 TRM9YML014W 840 nt17.63■□□□□ 0.41
VMR1P38735 LPX1YOR084W 1164 nt17.62■□□□□ 0.41
VMR1P38735 CCT6YDR188W 1641 nt17.57■□□□□ 0.4
VMR1P38735 YCH1YGR203W 447 nt17.52■□□□□ 0.39
Retrieved 100 of 7,029 protein–RNA pairs in 7.9 ms