RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YGL036WP53185 909 aaPredicted RBP2.73□□□□□ -1.97
RPB11YOL005C CBK1P53894 756 aa2.73□□□□□ -1.97
RPB11YOL005C OCT1P35999 772 aa2.72□□□□□ -1.97
RPB11YOL005C RRN3P36070 627 aa2.72□□□□□ -1.97
RPB11YOL005C NTR2P36118 322 aaPredicted RBP2.72□□□□□ -1.97
RPB11YOL005C CFD1P40558 293 aa2.72□□□□□ -1.97
RPB11YOL005C YIR016WP40572 265 aa2.72□□□□□ -1.97
RPB11YOL005C CDC1P40986 491 aa2.72□□□□□ -1.97
RPB11YOL005C SWP82P43554 623 aa2.72□□□□□ -1.97
RPB11YOL005C VPS25P47142 202 aa2.72□□□□□ -1.97
RPB11YOL005C SCW4P53334 386 aaKnown RBP2.72□□□□□ -1.97
RPB11YOL005C SEC5P89102 971 aa2.72□□□□□ -1.97
RPB11YOL005C TFC6Q06339 672 aa2.72□□□□□ -1.97
RPB11YOL005C YAP7Q08182 245 aa2.72□□□□□ -1.97
RPB11YOL005C RGT2Q12300 763 aa2.72□□□□□ -1.97
RPB11YOL005C YPR089WO13585 888 aa2.71□□□□□ -1.98
RPB11YOL005C PET111P08468 800 aa2.71□□□□□ -1.98
RPB11YOL005C GPA1P08539 472 aa2.71□□□□□ -1.98
RPB11YOL005C CNA1P23287 553 aa2.71□□□□□ -1.98
RPB11YOL005C ECM32P32644 1121 aaKnown RBP2.71□□□□□ -1.98
RPB11YOL005C GEX2P36173 615 aa2.71□□□□□ -1.98
RPB11YOL005C IME4P41833 600 aa2.71□□□□□ -1.98
RPB11YOL005C YFR020WP43600 232 aa2.71□□□□□ -1.98
RPB11YOL005C UBP8P50102 471 aa2.71□□□□□ -1.98
RPB11YOL005C RSM28Q03430 361 aa2.71□□□□□ -1.98
RPB11YOL005C FRE3Q08905 711 aa2.71□□□□□ -1.98
RPB11YOL005C NEW1Q08972 1196 aaKnown RBP2.71□□□□□ -1.98
RPB11YOL005C NBP2Q12163 236 aa2.71□□□□□ -1.98
RPB11YOL005C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
RPB11YOL005C VCX1Q99385 411 aa2.71□□□□□ -1.98
RPB11YOL005C YBR085C-AO43137 85 aa2.7□□□□□ -1.98
RPB11YOL005C RAP1P11938 827 aa2.7□□□□□ -1.98
RPB11YOL005C SRP54P20424 541 aaKnown RBP2.7□□□□□ -1.98
RPB11YOL005C MRP20P32387 263 aa2.7□□□□□ -1.98
RPB11YOL005C ALY1P36117 915 aa2.7□□□□□ -1.98
RPB11YOL005C ESL2P36168 1195 aa2.7□□□□□ -1.98
RPB11YOL005C AAP1P37898 856 aaKnown RBP2.7□□□□□ -1.98
RPB11YOL005C SEC31P38968 1273 aaKnown RBP2.7□□□□□ -1.98
RPB11YOL005C ECM10P39987 644 aa2.7□□□□□ -1.98
RPB11YOL005C YJR061WP40355 935 aa2.7□□□□□ -1.98
RPB11YOL005C NNF2P53253 936 aa2.7□□□□□ -1.98
RPB11YOL005C MRPL1Q04599 285 aa2.7□□□□□ -1.98
RPB11YOL005C YLR455WQ06188 304 aa2.7□□□□□ -1.98
RPB11YOL005C PSK2Q08217 1101 aa2.7□□□□□ -1.98
RPB11YOL005C SKM1Q12469 655 aa2.7□□□□□ -1.98
RPB11YOL005C HXK2P04807 486 aaKnown RBP2.69□□□□□ -1.98
RPB11YOL005C PRE8P23639 250 aa2.69□□□□□ -1.98
RPB11YOL005C MCM10P32354 571 aa2.69□□□□□ -1.98
RPB11YOL005C PXL1P36166 706 aa2.69□□□□□ -1.98
RPB11YOL005C STV1P37296 890 aa2.69□□□□□ -1.98
RPB11YOL005C YEL068CP39977 110 aa2.69□□□□□ -1.98
RPB11YOL005C PHM8P40025 321 aa2.69□□□□□ -1.98
RPB11YOL005C BUR6P40096 142 aa2.69□□□□□ -1.98
RPB11YOL005C VID27P40157 782 aa2.69□□□□□ -1.98
RPB11YOL005C SEC24P40482 926 aaKnown RBP2.69□□□□□ -1.98
RPB11YOL005C PCI8P40512 444 aa2.69□□□□□ -1.98
RPB11YOL005C LYS14P40971 790 aa2.69□□□□□ -1.98
RPB11YOL005C CTK2P46962 323 aa2.69□□□□□ -1.98
RPB11YOL005C VPS4P52917 437 aa2.69□□□□□ -1.98
RPB11YOL005C YNL234WP53857 426 aa2.69□□□□□ -1.98
RPB11YOL005C SWF1Q04629 336 aa2.69□□□□□ -1.98
RPB11YOL005C ENT4Q07872 247 aa2.69□□□□□ -1.98
RPB11YOL005C GEP3Q08622 556 aa2.69□□□□□ -1.98
RPB11YOL005C GPN2Q08726 347 aaPredicted RBP2.69□□□□□ -1.98
RPB11YOL005C ATX2Q12067 313 aa2.69□□□□□ -1.98
RPB11YOL005C YLR112WQ12130 139 aa2.69□□□□□ -1.98
RPB11YOL005C ICT1Q12385 394 aa2.69□□□□□ -1.98
RPB11YOL005C YOR111WQ99210 232 aa2.69□□□□□ -1.98
RPB11YOL005C CHO1P08456 276 aa2.68□□□□□ -1.98
RPB11YOL005C RPL42AP0CX27 106 aaKnown RBP2.68□□□□□ -1.98
RPB11YOL005C RPL42BP0CX28 106 aaKnown RBP2.68□□□□□ -1.98
RPB11YOL005C TKL1P23254 680 aaKnown RBP2.68□□□□□ -1.98
RPB11YOL005C LCB1P25045 558 aaKnown RBP2.68□□□□□ -1.98
RPB11YOL005C MGM1P32266 881 aa2.68□□□□□ -1.98
RPB11YOL005C TMT1P32643 299 aa2.68□□□□□ -1.98
RPB11YOL005C SPC97P38863 823 aa2.68□□□□□ -1.98
RPB11YOL005C AFG3P39925 761 aa2.68□□□□□ -1.98
RPB11YOL005C TPA1P40032 644 aaKnown RBP2.68□□□□□ -1.98
RPB11YOL005C MDV1P47025 714 aa2.68□□□□□ -1.98
RPB11YOL005C MEP3P53390 489 aa2.68□□□□□ -1.98
RPB11YOL005C MPS1P54199 764 aa2.68□□□□□ -1.98
RPB11YOL005C RPL15BP54780 204 aaPredicted RBP2.68□□□□□ -1.98
RPB11YOL005C VTC3Q02725 835 aa2.68□□□□□ -1.98
RPB11YOL005C IZH1Q03419 316 aa2.68□□□□□ -1.98
RPB11YOL005C PIG1Q06216 648 aa2.68□□□□□ -1.98
RPB11YOL005C SKG3Q06315 1026 aa2.68□□□□□ -1.98
RPB11YOL005C VIP1Q06685 1146 aaKnown RBP2.68□□□□□ -1.98
RPB11YOL005C GSH2Q08220 491 aa2.68□□□□□ -1.98
RPB11YOL005C ENT1Q12518 454 aa2.68□□□□□ -1.98
RPB11YOL005C FUM1P08417 488 aaKnown RBP2.67□□□□□ -1.98
RPB11YOL005C RPB2P08518 1224 aaKnown RBP2.67□□□□□ -1.98
RPB11YOL005C YER190C-BP0CX94 160 aa2.67□□□□□ -1.98
RPB11YOL005C YEL077W-AP0CX95 160 aa2.67□□□□□ -1.98
RPB11YOL005C YGR296C-BP0CX96 160 aa2.67□□□□□ -1.98
RPB11YOL005C YPL283W-BP0CX97 160 aa2.67□□□□□ -1.98
RPB11YOL005C YPR204C-AP0CX98 160 aa2.67□□□□□ -1.98
RPB11YOL005C CHS3P29465 1165 aa2.67□□□□□ -1.98
RPB11YOL005C ASK1P35734 292 aa2.67□□□□□ -1.98
RPB11YOL005C RFC1P38630 861 aaKnown RBP2.67□□□□□ -1.98
RPB11YOL005C GND1P38720 489 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms