Protein–RNA interactions for Protein: P50102

UBP8, Ubiquitin carboxyl-terminal hydrolase 8, yeastyeast

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP8P50102 NSR1YGR159C 1245 nt17.12■□□□□ 0.33
UBP8P50102 YML009W-BYML009W-B 477 nt16.8■□□□□ 0.28
UBP8P50102 NOP1YDL014W 984 nt16.13■□□□□ 0.17
UBP8P50102 MDJ1YFL016C 1536 nt15.64■□□□□ 0.09
UBP8P50102 YKL036CYKL036C 393 nt14.6□□□□□ -0.07
UBP8P50102 YJL027CYJL027C 417 nt14.36□□□□□ -0.11
UBP8P50102 SRX1YKL086W 384 nt14.13□□□□□ -0.15
UBP8P50102 Q0297Q0297 156 nt14.03□□□□□ -0.16
UBP8P50102 DBP2YNL112W 1641 nt13.71□□□□□ -0.22
UBP8P50102 YBR190WYBR190W 312 nt13.45□□□□□ -0.26
UBP8P50102 YCR051WYCR051W 669 nt13.32□□□□□ -0.28
UBP8P50102 SCS3YGL126W 1143 nt13.2□□□□□ -0.3
UBP8P50102 TRN1tP(UGG)A 72 nt13.09□□□□□ -0.31
UBP8P50102 SUF9tP(UGG)F 72 nt13.09□□□□□ -0.31
UBP8P50102 SUF8tP(UGG)H 72 nt13.09□□□□□ -0.31
UBP8P50102 tP(UGG)LtP(UGG)L 72 nt13.09□□□□□ -0.31
UBP8P50102 SUF7tP(UGG)M 72 nt13.09□□□□□ -0.31
UBP8P50102 tP(UGG)N1tP(UGG)N1 72 nt13.09□□□□□ -0.31
UBP8P50102 tP(UGG)N2tP(UGG)N2 72 nt13.09□□□□□ -0.31
UBP8P50102 tP(UGG)O1tP(UGG)O1 72 nt13.09□□□□□ -0.31
UBP8P50102 SUF11tP(UGG)O2 72 nt13.09□□□□□ -0.31
UBP8P50102 RTC3YHR087W 336 nt13.06□□□□□ -0.32
UBP8P50102 SSA3YBL075C 1950 nt12.89□□□□□ -0.35
UBP8P50102 CCC1YLR220W 969 nt12.85□□□□□ -0.35
UBP8P50102 RVS167YDR388W 1449 nt12.68□□□□□ -0.38
UBP8P50102 YOL085CYOL085C 342 nt12.65□□□□□ -0.38
UBP8P50102 SCJ1YMR214W 1134 nt12.63□□□□□ -0.39
UBP8P50102 PUT4YOR348C 1884 nt12.61□□□□□ -0.39
UBP8P50102 RPP1BYDL130W 321 nt12.57□□□□□ -0.4
UBP8P50102 PKP1YIL042C 1185 nt12.44□□□□□ -0.42
UBP8P50102 ARE1YCR048W 1833 nt12.23□□□□□ -0.45
UBP8P50102 tP(UGG)O3tP(UGG)O3 72 nt12.2□□□□□ -0.46
UBP8P50102 SHR5YOL110W 714 nt12.18□□□□□ -0.46
UBP8P50102 POA1YBR022W 534 nt12.12□□□□□ -0.47
UBP8P50102 URN1YPR152C 1398 nt12.1□□□□□ -0.47
UBP8P50102 PET122YER153C 765 nt12.08□□□□□ -0.48
UBP8P50102 SAH1YER043C 1350 nt12.06□□□□□ -0.48
UBP8P50102 YHR049C-AYHR049C-A 297 nt12.06□□□□□ -0.48
UBP8P50102 OPI9YLR338W 858 nt12.05□□□□□ -0.48
UBP8P50102 BSC6YOL137W 1494 nt11.98□□□□□ -0.49
UBP8P50102 DEP1YAL013W 1218 nt11.95□□□□□ -0.5
UBP8P50102 SPT5YML010W 3192 nt11.85□□□□□ -0.51
UBP8P50102 YDJ1YNL064C 1230 nt11.82□□□□□ -0.52
UBP8P50102 RPN10YHR200W 807 nt11.8□□□□□ -0.52
UBP8P50102 SCR1SCR1 522 nt11.8□□□□□ -0.52
UBP8P50102 ATS1YAL020C 1002 nt11.74□□□□□ -0.53
UBP8P50102 YNL208WYNL208W 600 nt11.73□□□□□ -0.53
UBP8P50102 BUD23YCR047C 828 nt11.68□□□□□ -0.54
UBP8P50102 PUN1YLR414C 792 nt11.68□□□□□ -0.54
UBP8P50102 RRN5YLR141W 1092 nt11.66□□□□□ -0.54
UBP8P50102 PTC2YER089C 1395 nt11.6□□□□□ -0.55
UBP8P50102 GAR1YHR089C 618 nt11.59□□□□□ -0.55
UBP8P50102 SSA4YER103W 1929 nt11.58□□□□□ -0.55
UBP8P50102 YJR018WYJR018W 363 nt11.52□□□□□ -0.57
UBP8P50102 NAB2YGL122C 1578 nt11.51□□□□□ -0.57
UBP8P50102 YER088W-BYER088W-B 147 nt11.44□□□□□ -0.58
UBP8P50102 FIS1YIL065C 468 nt11.39□□□□□ -0.59
UBP8P50102 YJR120WYJR120W 351 nt11.35□□□□□ -0.59
UBP8P50102 RSB1YOR049C 1065 nt11.31□□□□□ -0.6
UBP8P50102 MEP2YNL142W 1500 nt11.3□□□□□ -0.6
UBP8P50102 DAL1YIR027C 1383 nt11.28□□□□□ -0.6
UBP8P50102 TIR1YER011W 765 nt11.23□□□□□ -0.61
UBP8P50102 SSA1YAL005C 1929 nt11.22□□□□□ -0.61
UBP8P50102 BDF1YLR399C 2061 nt11.21□□□□□ -0.61
UBP8P50102 PHO4YFR034C 939 nt11.2□□□□□ -0.62
UBP8P50102 FPR4YLR449W 1179 nt11.18□□□□□ -0.62
UBP8P50102 Q0182Q0182 405 nt11.16□□□□□ -0.62
UBP8P50102 YPS1YLR120C 1710 nt11.15□□□□□ -0.62
UBP8P50102 INM2YDR287W 879 nt11.15□□□□□ -0.62
UBP8P50102 RPP2BYDR382W 333 nt11.12□□□□□ -0.63
UBP8P50102 DCW1YKL046C 1350 nt11.12□□□□□ -0.63
UBP8P50102 TAT1YBR069C 1860 nt11.06□□□□□ -0.64
UBP8P50102 YDR095CYDR095C 411 nt11.03□□□□□ -0.64
UBP8P50102 SRB2YHR041C 633 nt11□□□□□ -0.65
UBP8P50102 YHR165W-AYHR165W-A 312 nt11□□□□□ -0.65
UBP8P50102 YBL100CYBL100C 315 nt10.98□□□□□ -0.65
UBP8P50102 EMI2YDR516C 1503 nt10.94□□□□□ -0.66
UBP8P50102 YBR220CYBR220C 1683 nt10.92□□□□□ -0.66
UBP8P50102 PST2YDR032C 597 nt10.91□□□□□ -0.66
UBP8P50102 BDH2YAL061W 1254 nt10.87□□□□□ -0.67
UBP8P50102 PTP1YDL230W 1008 nt10.85□□□□□ -0.67
UBP8P50102 FUN26YAL022C 1554 nt10.85□□□□□ -0.67
UBP8P50102 YDL221WYDL221W 552 nt10.84□□□□□ -0.67
UBP8P50102 YMR090WYMR090W 684 nt10.84□□□□□ -0.67
UBP8P50102 CAC2YML102W 1407 nt10.83□□□□□ -0.68
UBP8P50102 RPP2AYOL039W 321 nt10.79□□□□□ -0.68
UBP8P50102 SDH1YKL148C 1923 nt10.79□□□□□ -0.68
UBP8P50102 ALF1YNL148C 765 nt10.74□□□□□ -0.69
UBP8P50102 TRM9YML014W 840 nt10.7□□□□□ -0.7
UBP8P50102 IRC15YPL017C 1500 nt10.68□□□□□ -0.7
UBP8P50102 CCT6YDR188W 1641 nt10.67□□□□□ -0.7
UBP8P50102 WWM1YFL010C 636 nt10.66□□□□□ -0.7
UBP8P50102 SIS1YNL007C 1059 nt10.66□□□□□ -0.7
UBP8P50102 SCC4YER147C 1875 nt10.64□□□□□ -0.71
UBP8P50102 MOT3YMR070W 1473 nt10.64□□□□□ -0.71
UBP8P50102 LSM3YLR438C-A 270 nt10.64□□□□□ -0.71
UBP8P50102 PCH2YBR186W 1695 nt10.59□□□□□ -0.71
UBP8P50102 GIS3YLR094C 1509 nt10.58□□□□□ -0.72
UBP8P50102 SUF2tP(AGG)C 72 nt10.57□□□□□ -0.72
UBP8P50102 SUF10tP(AGG)N 72 nt10.57□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms