Protein–RNA interactions for Protein: P08518

RPB2, DNA-directed RNA polymerase II subunit RPB2, yeastyeast

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB2P08518 NSR1YGR159C 1245 nt20.78■□□□□ 0.92
RPB2P08518 YML009W-BYML009W-B 477 nt20.6■□□□□ 0.89
RPB2P08518 NOP1YDL014W 984 nt19.84■□□□□ 0.77
RPB2P08518 MDJ1YFL016C 1536 nt18.79■□□□□ 0.6
RPB2P08518 YKL036CYKL036C 393 nt18.07■□□□□ 0.48
RPB2P08518 SRX1YKL086W 384 nt17.42■□□□□ 0.38
RPB2P08518 Q0297Q0297 156 nt17.38■□□□□ 0.37
RPB2P08518 YJL027CYJL027C 417 nt17.32■□□□□ 0.36
RPB2P08518 DBP2YNL112W 1641 nt16.58■□□□□ 0.24
RPB2P08518 YCR051WYCR051W 669 nt16.44■□□□□ 0.22
RPB2P08518 SCS3YGL126W 1143 nt16.34■□□□□ 0.21
RPB2P08518 YBR190WYBR190W 312 nt16.16■□□□□ 0.18
RPB2P08518 TRN1tP(UGG)A 72 nt15.99■□□□□ 0.15
RPB2P08518 SUF9tP(UGG)F 72 nt15.99■□□□□ 0.15
RPB2P08518 SUF8tP(UGG)H 72 nt15.99■□□□□ 0.15
RPB2P08518 tP(UGG)LtP(UGG)L 72 nt15.99■□□□□ 0.15
RPB2P08518 SUF7tP(UGG)M 72 nt15.99■□□□□ 0.15
RPB2P08518 tP(UGG)N1tP(UGG)N1 72 nt15.99■□□□□ 0.15
RPB2P08518 tP(UGG)N2tP(UGG)N2 72 nt15.99■□□□□ 0.15
RPB2P08518 tP(UGG)O1tP(UGG)O1 72 nt15.99■□□□□ 0.15
RPB2P08518 SUF11tP(UGG)O2 72 nt15.99■□□□□ 0.15
RPB2P08518 RTC3YHR087W 336 nt15.83■□□□□ 0.12
RPB2P08518 CCC1YLR220W 969 nt15.72■□□□□ 0.11
RPB2P08518 YOL085CYOL085C 342 nt15.71■□□□□ 0.11
RPB2P08518 RPP1BYDL130W 321 nt15.56■□□□□ 0.08
RPB2P08518 PKP1YIL042C 1185 nt15.49■□□□□ 0.07
RPB2P08518 SCJ1YMR214W 1134 nt15.36■□□□□ 0.05
RPB2P08518 SSA3YBL075C 1950 nt15.36■□□□□ 0.05
RPB2P08518 RVS167YDR388W 1449 nt15.35■□□□□ 0.05
RPB2P08518 PUT4YOR348C 1884 nt15.04■□□□□ -0
RPB2P08518 tP(UGG)O3tP(UGG)O3 72 nt14.98□□□□□ -0.01
RPB2P08518 PET122YER153C 765 nt14.94□□□□□ -0.02
RPB2P08518 SHR5YOL110W 714 nt14.79□□□□□ -0.04
RPB2P08518 ARE1YCR048W 1833 nt14.6□□□□□ -0.07
RPB2P08518 URN1YPR152C 1398 nt14.58□□□□□ -0.08
RPB2P08518 SCR1SCR1 522 nt14.57□□□□□ -0.08
RPB2P08518 POA1YBR022W 534 nt14.57□□□□□ -0.08
RPB2P08518 SAH1YER043C 1350 nt14.5□□□□□ -0.09
RPB2P08518 ATS1YAL020C 1002 nt14.5□□□□□ -0.09
RPB2P08518 YDJ1YNL064C 1230 nt14.5□□□□□ -0.09
RPB2P08518 YHR049C-AYHR049C-A 297 nt14.49□□□□□ -0.09
RPB2P08518 DEP1YAL013W 1218 nt14.47□□□□□ -0.09
RPB2P08518 OPI9YLR338W 858 nt14.46□□□□□ -0.09
RPB2P08518 RRN5YLR141W 1092 nt14.45□□□□□ -0.1
RPB2P08518 BSC6YOL137W 1494 nt14.37□□□□□ -0.11
RPB2P08518 RPN10YHR200W 807 nt14.3□□□□□ -0.12
RPB2P08518 GAR1YHR089C 618 nt14.19□□□□□ -0.14
RPB2P08518 YER088W-BYER088W-B 147 nt14.18□□□□□ -0.14
RPB2P08518 YNL208WYNL208W 600 nt14.18□□□□□ -0.14
RPB2P08518 BUD23YCR047C 828 nt14.14□□□□□ -0.15
RPB2P08518 PUN1YLR414C 792 nt14.08□□□□□ -0.16
RPB2P08518 RSB1YOR049C 1065 nt14.01□□□□□ -0.17
RPB2P08518 PTC2YER089C 1395 nt13.97□□□□□ -0.17
RPB2P08518 SPT5YML010W 3192 nt13.92□□□□□ -0.18
RPB2P08518 YJR018WYJR018W 363 nt13.87□□□□□ -0.19
RPB2P08518 NAB2YGL122C 1578 nt13.87□□□□□ -0.19
RPB2P08518 SSA4YER103W 1929 nt13.82□□□□□ -0.2
RPB2P08518 YJR120WYJR120W 351 nt13.76□□□□□ -0.21
RPB2P08518 TIR1YER011W 765 nt13.75□□□□□ -0.21
RPB2P08518 SSA1YAL005C 1929 nt13.7□□□□□ -0.22
RPB2P08518 FIS1YIL065C 468 nt13.61□□□□□ -0.23
RPB2P08518 FPR4YLR449W 1179 nt13.59□□□□□ -0.23
RPB2P08518 DAL1YIR027C 1383 nt13.58□□□□□ -0.23
RPB2P08518 MEP2YNL142W 1500 nt13.53□□□□□ -0.24
RPB2P08518 PST2YDR032C 597 nt13.52□□□□□ -0.25
RPB2P08518 SRB2YHR041C 633 nt13.52□□□□□ -0.25
RPB2P08518 RPP2BYDR382W 333 nt13.5□□□□□ -0.25
RPB2P08518 PHO4YFR034C 939 nt13.46□□□□□ -0.25
RPB2P08518 INM2YDR287W 879 nt13.45□□□□□ -0.26
RPB2P08518 YPS1YLR120C 1710 nt13.36□□□□□ -0.27
RPB2P08518 YHR165W-AYHR165W-A 312 nt13.32□□□□□ -0.28
RPB2P08518 DCW1YKL046C 1350 nt13.29□□□□□ -0.28
RPB2P08518 BDF1YLR399C 2061 nt13.27□□□□□ -0.29
RPB2P08518 YBL100CYBL100C 315 nt13.25□□□□□ -0.29
RPB2P08518 YDR095CYDR095C 411 nt13.21□□□□□ -0.29
RPB2P08518 BDH2YAL061W 1254 nt13.19□□□□□ -0.3
RPB2P08518 YMR090WYMR090W 684 nt13.16□□□□□ -0.3
RPB2P08518 EMI2YDR516C 1503 nt13.13□□□□□ -0.31
RPB2P08518 WWM1YFL010C 636 nt13.12□□□□□ -0.31
RPB2P08518 TAT1YBR069C 1860 nt13.12□□□□□ -0.31
RPB2P08518 FUN26YAL022C 1554 nt13.08□□□□□ -0.32
RPB2P08518 SHU1YHL006C 453 nt13.05□□□□□ -0.32
RPB2P08518 ALF1YNL148C 765 nt13.05□□□□□ -0.32
RPB2P08518 YBR220CYBR220C 1683 nt13.02□□□□□ -0.32
RPB2P08518 YDL221WYDL221W 552 nt12.99□□□□□ -0.33
RPB2P08518 RPP2AYOL039W 321 nt12.97□□□□□ -0.33
RPB2P08518 PTP1YDL230W 1008 nt12.96□□□□□ -0.33
RPB2P08518 LSM3YLR438C-A 270 nt12.95□□□□□ -0.34
RPB2P08518 TRM9YML014W 840 nt12.94□□□□□ -0.34
RPB2P08518 YAL037C-BYAL037C-B 975 nt12.93□□□□□ -0.34
RPB2P08518 SDH1YKL148C 1923 nt12.91□□□□□ -0.34
RPB2P08518 CCT6YDR188W 1641 nt12.91□□□□□ -0.34
RPB2P08518 CAC2YML102W 1407 nt12.9□□□□□ -0.34
RPB2P08518 HOM6YJR139C 1080 nt12.9□□□□□ -0.34
RPB2P08518 YFL021C-AYFL021C-A 855 nt12.88□□□□□ -0.35
RPB2P08518 YGR021WYGR021W 873 nt12.88□□□□□ -0.35
RPB2P08518 SIS1YNL007C 1059 nt12.82□□□□□ -0.36
RPB2P08518 SUF2tP(AGG)C 72 nt12.81□□□□□ -0.36
RPB2P08518 SUF10tP(AGG)N 72 nt12.81□□□□□ -0.36
RPB2P08518 MNP1YGL068W 585 nt12.79□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms