Protein–RNA interactions for Protein: P0CX27

RPL42A, 60S ribosomal protein L42-A, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42AP0CX27 NSR1YGR159C 1245 nt15.07■□□□□ 0
RPL42AP0CX27 YML009W-BYML009W-B 477 nt14.8□□□□□ -0.04
RPL42AP0CX27 NOP1YDL014W 984 nt14.31□□□□□ -0.12
RPL42AP0CX27 MDJ1YFL016C 1536 nt13.64□□□□□ -0.23
RPL42AP0CX27 YKL036CYKL036C 393 nt12.81□□□□□ -0.36
RPL42AP0CX27 YJL027CYJL027C 417 nt12.63□□□□□ -0.39
RPL42AP0CX27 SRX1YKL086W 384 nt12.45□□□□□ -0.42
RPL42AP0CX27 Q0297Q0297 156 nt12.35□□□□□ -0.43
RPL42AP0CX27 DBP2YNL112W 1641 nt11.89□□□□□ -0.51
RPL42AP0CX27 YBR190WYBR190W 312 nt11.8□□□□□ -0.52
RPL42AP0CX27 YCR051WYCR051W 669 nt11.78□□□□□ -0.52
RPL42AP0CX27 RTC3YHR087W 336 nt11.51□□□□□ -0.57
RPL42AP0CX27 TRN1tP(UGG)A 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 SUF9tP(UGG)F 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 SUF8tP(UGG)H 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 tP(UGG)LtP(UGG)L 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 SUF7tP(UGG)M 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 tP(UGG)N1tP(UGG)N1 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 tP(UGG)N2tP(UGG)N2 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 tP(UGG)O1tP(UGG)O1 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 SUF11tP(UGG)O2 72 nt11.45□□□□□ -0.58
RPL42AP0CX27 SCS3YGL126W 1143 nt11.42□□□□□ -0.58
RPL42AP0CX27 SSA3YBL075C 1950 nt11.32□□□□□ -0.6
RPL42AP0CX27 CCC1YLR220W 969 nt11.32□□□□□ -0.6
RPL42AP0CX27 RVS167YDR388W 1449 nt11.24□□□□□ -0.61
RPL42AP0CX27 RPP1BYDL130W 321 nt11.08□□□□□ -0.64
RPL42AP0CX27 YOL085CYOL085C 342 nt11.07□□□□□ -0.64
RPL42AP0CX27 SCJ1YMR214W 1134 nt10.96□□□□□ -0.65
RPL42AP0CX27 PUT4YOR348C 1884 nt10.92□□□□□ -0.66
RPL42AP0CX27 PKP1YIL042C 1185 nt10.91□□□□□ -0.66
RPL42AP0CX27 tP(UGG)O3tP(UGG)O3 72 nt10.71□□□□□ -0.69
RPL42AP0CX27 SHR5YOL110W 714 nt10.71□□□□□ -0.69
RPL42AP0CX27 URN1YPR152C 1398 nt10.62□□□□□ -0.71
RPL42AP0CX27 ARE1YCR048W 1833 nt10.61□□□□□ -0.71
RPL42AP0CX27 PET122YER153C 765 nt10.59□□□□□ -0.71
RPL42AP0CX27 OPI9YLR338W 858 nt10.56□□□□□ -0.72
RPL42AP0CX27 POA1YBR022W 534 nt10.56□□□□□ -0.72
RPL42AP0CX27 SAH1YER043C 1350 nt10.54□□□□□ -0.72
RPL42AP0CX27 YHR049C-AYHR049C-A 297 nt10.51□□□□□ -0.73
RPL42AP0CX27 RPN10YHR200W 807 nt10.47□□□□□ -0.73
RPL42AP0CX27 DEP1YAL013W 1218 nt10.47□□□□□ -0.73
RPL42AP0CX27 SCR1SCR1 522 nt10.47□□□□□ -0.73
RPL42AP0CX27 YDJ1YNL064C 1230 nt10.41□□□□□ -0.74
RPL42AP0CX27 BSC6YOL137W 1494 nt10.41□□□□□ -0.74
RPL42AP0CX27 YNL208WYNL208W 600 nt10.33□□□□□ -0.76
RPL42AP0CX27 PUN1YLR414C 792 nt10.29□□□□□ -0.76
RPL42AP0CX27 RRN5YLR141W 1092 nt10.26□□□□□ -0.77
RPL42AP0CX27 BUD23YCR047C 828 nt10.25□□□□□ -0.77
RPL42AP0CX27 Q0182Q0182 405 nt10.25□□□□□ -0.77
RPL42AP0CX27 GAR1YHR089C 618 nt10.19□□□□□ -0.78
RPL42AP0CX27 PTC2YER089C 1395 nt10.16□□□□□ -0.78
RPL42AP0CX27 YJR018WYJR018W 363 nt10.13□□□□□ -0.79
RPL42AP0CX27 NAB2YGL122C 1578 nt10.11□□□□□ -0.79
RPL42AP0CX27 ATS1YAL020C 1002 nt10.11□□□□□ -0.79
RPL42AP0CX27 SPT5YML010W 3192 nt10.1□□□□□ -0.79
RPL42AP0CX27 YER088W-BYER088W-B 147 nt10.04□□□□□ -0.8
RPL42AP0CX27 MOT3YMR070W 1473 nt10.01□□□□□ -0.81
RPL42AP0CX27 SSA4YER103W 1929 nt9.98□□□□□ -0.81
RPL42AP0CX27 RSB1YOR049C 1065 nt9.96□□□□□ -0.82
RPL42AP0CX27 DAL1YIR027C 1383 nt9.9□□□□□ -0.82
RPL42AP0CX27 RPP2BYDR382W 333 nt9.88□□□□□ -0.83
RPL42AP0CX27 TIR1YER011W 765 nt9.88□□□□□ -0.83
RPL42AP0CX27 FIS1YIL065C 468 nt9.88□□□□□ -0.83
RPL42AP0CX27 FPR4YLR449W 1179 nt9.86□□□□□ -0.83
RPL42AP0CX27 INM2YDR287W 879 nt9.85□□□□□ -0.83
RPL42AP0CX27 MEP2YNL142W 1500 nt9.82□□□□□ -0.84
RPL42AP0CX27 PHO4YFR034C 939 nt9.79□□□□□ -0.84
RPL42AP0CX27 YJR120WYJR120W 351 nt9.79□□□□□ -0.84
RPL42AP0CX27 SSA1YAL005C 1929 nt9.78□□□□□ -0.84
RPL42AP0CX27 YPS1YLR120C 1710 nt9.73□□□□□ -0.85
RPL42AP0CX27 YHR165W-AYHR165W-A 312 nt9.67□□□□□ -0.86
RPL42AP0CX27 YBL100CYBL100C 315 nt9.66□□□□□ -0.86
RPL42AP0CX27 YDR095CYDR095C 411 nt9.62□□□□□ -0.87
RPL42AP0CX27 DCW1YKL046C 1350 nt9.61□□□□□ -0.87
RPL42AP0CX27 BDF1YLR399C 2061 nt9.59□□□□□ -0.87
RPL42AP0CX27 YMR090WYMR090W 684 nt9.59□□□□□ -0.87
RPL42AP0CX27 BDH2YAL061W 1254 nt9.57□□□□□ -0.88
RPL42AP0CX27 PAC11YDR488C 1602 nt9.53□□□□□ -0.88
RPL42AP0CX27 EMI2YDR516C 1503 nt9.52□□□□□ -0.88
RPL42AP0CX27 FUN26YAL022C 1554 nt9.52□□□□□ -0.89
RPL42AP0CX27 ALF1YNL148C 765 nt9.52□□□□□ -0.89
RPL42AP0CX27 TAT1YBR069C 1860 nt9.49□□□□□ -0.89
RPL42AP0CX27 TRM9YML014W 840 nt9.48□□□□□ -0.89
RPL42AP0CX27 SRB2YHR041C 633 nt9.47□□□□□ -0.89
RPL42AP0CX27 RPP2AYOL039W 321 nt9.45□□□□□ -0.9
RPL42AP0CX27 YBR220CYBR220C 1683 nt9.45□□□□□ -0.9
RPL42AP0CX27 YDL221WYDL221W 552 nt9.43□□□□□ -0.9
RPL42AP0CX27 PST2YDR032C 597 nt9.42□□□□□ -0.9
RPL42AP0CX27 YJL225CYJL225C 5277 nt9.42□□□□□ -0.9
RPL42AP0CX27 NVJ2YPR091C 2313 nt9.4□□□□□ -0.9
RPL42AP0CX27 LSM3YLR438C-A 270 nt9.4□□□□□ -0.9
RPL42AP0CX27 PTP1YDL230W 1008 nt9.38□□□□□ -0.91
RPL42AP0CX27 SUF2tP(AGG)C 72 nt9.38□□□□□ -0.91
RPL42AP0CX27 SUF10tP(AGG)N 72 nt9.38□□□□□ -0.91
RPL42AP0CX27 SDH1YKL148C 1923 nt9.38□□□□□ -0.91
RPL42AP0CX27 CCT6YDR188W 1641 nt9.37□□□□□ -0.91
RPL42AP0CX27 CAC2YML102W 1407 nt9.36□□□□□ -0.91
RPL42AP0CX27 WWM1YFL010C 636 nt9.35□□□□□ -0.91
RPL42AP0CX27 SIS1YNL007C 1059 nt9.33□□□□□ -0.92
RPL42AP0CX27 SCC4YER147C 1875 nt9.28□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms