Protein–RNA interactions for Protein: Q08905

FRE3, Ferric reductase transmembrane component 3, yeastyeast

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FRE3Q08905 NSR1YGR159C 1245 nt17.75■□□□□ 0.43
FRE3Q08905 YML009W-BYML009W-B 477 nt17.7■□□□□ 0.42
FRE3Q08905 NOP1YDL014W 984 nt17.16■□□□□ 0.34
FRE3Q08905 MDJ1YFL016C 1536 nt15.91■□□□□ 0.14
FRE3Q08905 YKL036CYKL036C 393 nt15.6■□□□□ 0.09
FRE3Q08905 SRX1YKL086W 384 nt14.94□□□□□ -0.02
FRE3Q08905 Q0297Q0297 156 nt14.88□□□□□ -0.03
FRE3Q08905 YJL027CYJL027C 417 nt14.73□□□□□ -0.05
FRE3Q08905 YCR051WYCR051W 669 nt14.21□□□□□ -0.13
FRE3Q08905 SCS3YGL126W 1143 nt14.05□□□□□ -0.16
FRE3Q08905 DBP2YNL112W 1641 nt13.94□□□□□ -0.18
FRE3Q08905 SSA3YBL075C 1950 nt13.83□□□□□ -0.2
FRE3Q08905 YBR190WYBR190W 312 nt13.71□□□□□ -0.21
FRE3Q08905 TRN1tP(UGG)A 72 nt13.58□□□□□ -0.24
FRE3Q08905 SUF9tP(UGG)F 72 nt13.58□□□□□ -0.24
FRE3Q08905 SUF8tP(UGG)H 72 nt13.58□□□□□ -0.24
FRE3Q08905 tP(UGG)LtP(UGG)L 72 nt13.58□□□□□ -0.24
FRE3Q08905 SUF7tP(UGG)M 72 nt13.58□□□□□ -0.24
FRE3Q08905 tP(UGG)N1tP(UGG)N1 72 nt13.58□□□□□ -0.24
FRE3Q08905 tP(UGG)N2tP(UGG)N2 72 nt13.58□□□□□ -0.24
FRE3Q08905 tP(UGG)O1tP(UGG)O1 72 nt13.58□□□□□ -0.24
FRE3Q08905 SUF11tP(UGG)O2 72 nt13.58□□□□□ -0.24
FRE3Q08905 CCC1YLR220W 969 nt13.55□□□□□ -0.24
FRE3Q08905 YOL085CYOL085C 342 nt13.5□□□□□ -0.25
FRE3Q08905 RTC3YHR087W 336 nt13.4□□□□□ -0.26
FRE3Q08905 RPP1BYDL130W 321 nt13.37□□□□□ -0.27
FRE3Q08905 PKP1YIL042C 1185 nt13.34□□□□□ -0.27
FRE3Q08905 RVS167YDR388W 1449 nt13.2□□□□□ -0.3
FRE3Q08905 PUT4YOR348C 1884 nt12.97□□□□□ -0.33
FRE3Q08905 SCJ1YMR214W 1134 nt12.95□□□□□ -0.34
FRE3Q08905 tP(UGG)O3tP(UGG)O3 72 nt12.82□□□□□ -0.36
FRE3Q08905 PET122YER153C 765 nt12.77□□□□□ -0.37
FRE3Q08905 SCR1SCR1 522 nt12.67□□□□□ -0.38
FRE3Q08905 SHR5YOL110W 714 nt12.63□□□□□ -0.39
FRE3Q08905 ATS1YAL020C 1002 nt12.53□□□□□ -0.4
FRE3Q08905 ARE1YCR048W 1833 nt12.52□□□□□ -0.41
FRE3Q08905 POA1YBR022W 534 nt12.51□□□□□ -0.41
FRE3Q08905 URN1YPR152C 1398 nt12.43□□□□□ -0.42
FRE3Q08905 RRN5YLR141W 1092 nt12.42□□□□□ -0.42
FRE3Q08905 YDJ1YNL064C 1230 nt12.39□□□□□ -0.43
FRE3Q08905 YHR049C-AYHR049C-A 297 nt12.38□□□□□ -0.43
FRE3Q08905 BSC6YOL137W 1494 nt12.38□□□□□ -0.43
FRE3Q08905 DEP1YAL013W 1218 nt12.37□□□□□ -0.43
FRE3Q08905 SAH1YER043C 1350 nt12.31□□□□□ -0.44
FRE3Q08905 SPT5YML010W 3192 nt12.31□□□□□ -0.44
FRE3Q08905 OPI9YLR338W 858 nt12.26□□□□□ -0.45
FRE3Q08905 SSA4YER103W 1929 nt12.23□□□□□ -0.45
FRE3Q08905 RPN10YHR200W 807 nt12.23□□□□□ -0.45
FRE3Q08905 GAR1YHR089C 618 nt12.19□□□□□ -0.46
FRE3Q08905 YER088W-BYER088W-B 147 nt12.15□□□□□ -0.46
FRE3Q08905 YNL208WYNL208W 600 nt12.15□□□□□ -0.46
FRE3Q08905 RSB1YOR049C 1065 nt12.13□□□□□ -0.47
FRE3Q08905 BUD23YCR047C 828 nt12.04□□□□□ -0.48
FRE3Q08905 Q0182Q0182 405 nt12.02□□□□□ -0.49
FRE3Q08905 PUN1YLR414C 792 nt11.92□□□□□ -0.5
FRE3Q08905 YJR018WYJR018W 363 nt11.85□□□□□ -0.51
FRE3Q08905 PTC2YER089C 1395 nt11.83□□□□□ -0.52
FRE3Q08905 BDF1YLR399C 2061 nt11.82□□□□□ -0.52
FRE3Q08905 NAB2YGL122C 1578 nt11.79□□□□□ -0.52
FRE3Q08905 TIR1YER011W 765 nt11.77□□□□□ -0.53
FRE3Q08905 MEP2YNL142W 1500 nt11.7□□□□□ -0.54
FRE3Q08905 TAT1YBR069C 1860 nt11.66□□□□□ -0.54
FRE3Q08905 SSA1YAL005C 1929 nt11.63□□□□□ -0.55
FRE3Q08905 PST2YDR032C 597 nt11.62□□□□□ -0.55
FRE3Q08905 RPP2BYDR382W 333 nt11.6□□□□□ -0.55
FRE3Q08905 FIS1YIL065C 468 nt11.54□□□□□ -0.56
FRE3Q08905 FPR4YLR449W 1179 nt11.52□□□□□ -0.57
FRE3Q08905 PAC11YDR488C 1602 nt11.52□□□□□ -0.57
FRE3Q08905 DAL1YIR027C 1383 nt11.5□□□□□ -0.57
FRE3Q08905 YJR120WYJR120W 351 nt11.49□□□□□ -0.57
FRE3Q08905 DCW1YKL046C 1350 nt11.48□□□□□ -0.57
FRE3Q08905 INM2YDR287W 879 nt11.47□□□□□ -0.57
FRE3Q08905 NVJ2YPR091C 2313 nt11.44□□□□□ -0.58
FRE3Q08905 YPS1YLR120C 1710 nt11.41□□□□□ -0.58
FRE3Q08905 MOT3YMR070W 1473 nt11.39□□□□□ -0.59
FRE3Q08905 PHO4YFR034C 939 nt11.38□□□□□ -0.59
FRE3Q08905 YBR220CYBR220C 1683 nt11.34□□□□□ -0.59
FRE3Q08905 SRB2YHR041C 633 nt11.33□□□□□ -0.6
FRE3Q08905 YHR165W-AYHR165W-A 312 nt11.33□□□□□ -0.6
FRE3Q08905 EMI2YDR516C 1503 nt11.32□□□□□ -0.6
FRE3Q08905 YMR090WYMR090W 684 nt11.32□□□□□ -0.6
FRE3Q08905 YBL100CYBL100C 315 nt11.31□□□□□ -0.6
FRE3Q08905 BDH2YAL061W 1254 nt11.28□□□□□ -0.6
FRE3Q08905 YDR095CYDR095C 411 nt11.23□□□□□ -0.61
FRE3Q08905 WWM1YFL010C 636 nt11.21□□□□□ -0.61
FRE3Q08905 FPS1YLL043W 2010 nt11.2□□□□□ -0.62
FRE3Q08905 SHU1YHL006C 453 nt11.19□□□□□ -0.62
FRE3Q08905 SDH1YKL148C 1923 nt11.18□□□□□ -0.62
FRE3Q08905 YDL221WYDL221W 552 nt11.18□□□□□ -0.62
FRE3Q08905 TRM9YML014W 840 nt11.16□□□□□ -0.62
FRE3Q08905 FUN26YAL022C 1554 nt11.15□□□□□ -0.62
FRE3Q08905 YAL037C-BYAL037C-B 975 nt11.13□□□□□ -0.63
FRE3Q08905 PCH2YBR186W 1695 nt11.11□□□□□ -0.63
FRE3Q08905 YGR021WYGR021W 873 nt11.1□□□□□ -0.63
FRE3Q08905 YKL097CYKL097C 411 nt11.1□□□□□ -0.63
FRE3Q08905 LSM3YLR438C-A 270 nt11.1□□□□□ -0.63
FRE3Q08905 ALF1YNL148C 765 nt11.1□□□□□ -0.63
FRE3Q08905 CAC2YML102W 1407 nt11.07□□□□□ -0.64
FRE3Q08905 GUT2YIL155C 1950 nt11.07□□□□□ -0.64
FRE3Q08905 SEC11YIR022W 504 nt11.06□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 8.3 ms