RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C DRS1P32892 752 aaKnown RBP8.95□□□□□ -0.98
RPB11YOL005C MTC1P47018 478 aaKnown RBP8.89□□□□□ -0.99
RPB11YOL005C BFR2Q06631 534 aaKnown RBP7.72□□□□□ -1.17
RPB11YOL005C DIP2Q12220 943 aaPredicted RBP7.62□□□□□ -1.19
RPB11YOL005C FAP1P53971 965 aa7.5□□□□□ -1.21
RPB11YOL005C AVT3P36062 692 aa7.44□□□□□ -1.22
RPB11YOL005C ISW2Q08773 1120 aa7.29□□□□□ -1.24
RPB11YOL005C RPG1P38249 964 aaKnown RBP7.21□□□□□ -1.26
RPB11YOL005C RSE1Q04693 1361 aaKnown RBP7.2□□□□□ -1.26
RPB11YOL005C PRI1P10363 409 aa7.17□□□□□ -1.26
RPB11YOL005C TFA1P36100 482 aa7.13□□□□□ -1.27
RPB11YOL005C AAD16Q02895 342 aa7.08□□□□□ -1.28
RPB11YOL005C PRY3P47033 881 aa7□□□□□ -1.29
RPB11YOL005C RPL17AP05740 184 aaKnown RBP6.96□□□□□ -1.3
RPB11YOL005C RPL17BP46990 184 aaKnown RBP6.96□□□□□ -1.3
RPB11YOL005C REB1P21538 810 aa6.91□□□□□ -1.3
RPB11YOL005C TSR3Q12094 313 aaKnown RBP6.88□□□□□ -1.31
RPB11YOL005C SPT21P35209 758 aa6.61□□□□□ -1.35
RPB11YOL005C MRPL32P25348 183 aa6.6□□□□□ -1.35
RPB11YOL005C HAA1Q12753 694 aaKnown RBP6.52□□□□□ -1.37
RPB11YOL005C RIM101P33400 625 aa6.51□□□□□ -1.37
RPB11YOL005C YCK3P39962 524 aa6.47□□□□□ -1.37
RPB11YOL005C YKR023WP36119 530 aaKnown RBP6.44□□□□□ -1.38
RPB11YOL005C PTP3P40048 928 aa6.38□□□□□ -1.39
RPB11YOL005C HOP09932 586 aa6.37□□□□□ -1.39
RPB11YOL005C DCD1P06773 312 aa6.35□□□□□ -1.39
RPB11YOL005C YAH1Q12184 172 aaKnown RBP6.34□□□□□ -1.39
RPB11YOL005C CDC27P38042 758 aa6.33□□□□□ -1.4
RPB11YOL005C OXP1P28273 1286 aa6.32□□□□□ -1.4
RPB11YOL005C YIL055CP40523 627 aaKnown RBP6.32□□□□□ -1.4
RPB11YOL005C TFC8Q12308 588 aa6.3□□□□□ -1.4
RPB11YOL005C SSP1P38871 571 aa6.24□□□□□ -1.41
RPB11YOL005C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42 RIP-Chip
RPB11YOL005C RSM7P47150 247 aa6.16□□□□□ -1.42
RPB11YOL005C YLR271WQ06152 274 aa6.16□□□□□ -1.42
RPB11YOL005C BCH2P36122 765 aa6.14□□□□□ -1.43
RPB11YOL005C YGL015CP33199 130 aa6.13□□□□□ -1.43
RPB11YOL005C SCY1P53009 804 aa6.1□□□□□ -1.43
RPB11YOL005C AI2P03876 854 aa6.08□□□□□ -1.44
RPB11YOL005C MAP2P38174 421 aaKnown RBP6.08□□□□□ -1.44
RPB11YOL005C BBC1P47068 1157 aa6.06□□□□□ -1.44
RPB11YOL005C EPS1P40557 701 aa6.04□□□□□ -1.44
RPB11YOL005C UBP10P53874 792 aaPredicted RBP6.04□□□□□ -1.44
RPB11YOL005C RQC2Q12532 1038 aaKnown RBP6.04□□□□□ -1.44
RPB11YOL005C MGA2P40578 1113 aa6.01□□□□□ -1.45
RPB11YOL005C CST9Q06032 482 aa5.99□□□□□ -1.45
RPB11YOL005C BDF1P35817 686 aa5.98□□□□□ -1.45
RPB11YOL005C PSD2P53037 1138 aaKnown RBP5.97□□□□□ -1.45
RPB11YOL005C SLX5P32828 619 aaKnown RBP5.96□□□□□ -1.46
RPB11YOL005C DMA1P38823 416 aa5.93□□□□□ -1.46
RPB11YOL005C MRM1P25270 412 aa5.91□□□□□ -1.46
RPB11YOL005C TIF4632P39936 914 aaKnown RBP5.85□□□□□ -1.47
RPB11YOL005C RTG3P38165 486 aa5.8□□□□□ -1.48
RPB11YOL005C RCR1P38212 213 aa5.79□□□□□ -1.48
RPB11YOL005C TGL3P40308 642 aa5.76□□□□□ -1.49
RPB11YOL005C RAM2P29703 316 aa5.72□□□□□ -1.49
RPB11YOL005C PIB1Q06651 286 aa5.7□□□□□ -1.5
RPB11YOL005C VPS29P38759 282 aa5.69□□□□□ -1.5
RPB11YOL005C YFR006WP43590 535 aa5.69□□□□□ -1.5
RPB11YOL005C YAP5P40574 245 aa5.68□□□□□ -1.5
RPB11YOL005C YMR1P47147 688 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
RPB11YOL005C YOR238WQ08634 303 aa5.68□□□□□ -1.5
RPB11YOL005C DBP1P24784 617 aaKnown RBP5.66□□□□□ -1.5
RPB11YOL005C MAK11P20484 414 aaKnown RBP5.64□□□□□ -1.51
RPB11YOL005C STS1P38637 319 aa5.64□□□□□ -1.51
RPB11YOL005C MIF2P35201 549 aa5.63□□□□□ -1.51
RPB11YOL005C NSR1P27476 414 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
RPB11YOL005C SET1P38827 1080 aaKnown RBP5.61□□□□□ -1.51
RPB11YOL005C GTT3P39996 337 aa5.59□□□□□ -1.51
RPB11YOL005C COQ8P27697 501 aa5.58□□□□□ -1.52
RPB11YOL005C VMA1P17255 1071 aaKnown RBP5.54□□□□□ -1.52
RPB11YOL005C EDS1P38073 919 aa5.53□□□□□ -1.52
RPB11YOL005C MST1P07236 462 aa5.52□□□□□ -1.53
RPB11YOL005C VPS70P47161 811 aa5.52□□□□□ -1.53
RPB11YOL005C WSC3Q12215 556 aa5.52□□□□□ -1.53
RPB11YOL005C SAS10Q12136 610 aaPredicted RBP5.51□□□□□ -1.53
RPB11YOL005C PTC3P34221 468 aaKnown RBP5.49□□□□□ -1.53
RPB11YOL005C IFH1P39520 1085 aa5.49□□□□□ -1.53
RPB11YOL005C SET4P42948 560 aa5.47□□□□□ -1.53
RPB11YOL005C ATH1P48016 1211 aa5.47□□□□□ -1.53
RPB11YOL005C GRE2Q12068 342 aaKnown RBP5.47□□□□□ -1.53
RPB11YOL005C YBL029C-AQ3E756 94 aa5.47□□□□□ -1.53
RPB11YOL005C UBP9P39967 754 aa5.46□□□□□ -1.54
RPB11YOL005C GYP5Q12344 894 aa5.46□□□□□ -1.54
RPB11YOL005C SPB4P25808 606 aaPredicted RBP5.44□□□□□ -1.54
RPB11YOL005C YPR148CQ06523 435 aa5.44□□□□□ -1.54
RPB11YOL005C YOL036WQ08206 761 aa5.44□□□□□ -1.54
RPB11YOL005C NOP53Q12080 455 aaKnown RBP5.44□□□□□ -1.54
RPB11YOL005C DCW1P36091 449 aa5.43□□□□□ -1.54
RPB11YOL005C CKB1P43639 278 aa5.42□□□□□ -1.54
RPB11YOL005C SAM3Q08986 587 aa5.42□□□□□ -1.54
RPB11YOL005C GUT1P32190 709 aa5.4□□□□□ -1.54
RPB11YOL005C SPP1Q03012 353 aa5.4□□□□□ -1.54
RPB11YOL005C VNX1P42839 908 aa5.39□□□□□ -1.55
RPB11YOL005C HTA1P04911 132 aaKnown RBP5.37□□□□□ -1.55
RPB11YOL005C HTA2P04912 132 aa5.37□□□□□ -1.55
RPB11YOL005C VHR2P40041 505 aa5.37□□□□□ -1.55
RPB11YOL005C MSB4Q12317 492 aa5.37□□□□□ -1.55
RPB11YOL005C PBS2P08018 668 aa5.36□□□□□ -1.55
RPB11YOL005C ABP1P15891 592 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms