Protein–RNA interactions for Protein: P40355

YJR061W, Uncharacterized protein YJR061W, yeastyeast

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJR061WP40355 YML009W-BYML009W-B 477 nt20.46■□□□□ 0.87
YJR061WP40355 NSR1YGR159C 1245 nt20.3■□□□□ 0.84
YJR061WP40355 NOP1YDL014W 984 nt20.11■□□□□ 0.81
YJR061WP40355 YKL036CYKL036C 393 nt18.85■□□□□ 0.61
YJR061WP40355 MDJ1YFL016C 1536 nt18.22■□□□□ 0.51
YJR061WP40355 Q0297Q0297 156 nt17.67■□□□□ 0.42
YJR061WP40355 YJL027CYJL027C 417 nt17.66■□□□□ 0.42
YJR061WP40355 SRX1YKL086W 384 nt17.52■□□□□ 0.4
YJR061WP40355 SCS3YGL126W 1143 nt17.28■□□□□ 0.36
YJR061WP40355 YCR051WYCR051W 669 nt16.65■□□□□ 0.26
YJR061WP40355 YOL085CYOL085C 342 nt16.28■□□□□ 0.2
YJR061WP40355 DBP2YNL112W 1641 nt16.01■□□□□ 0.15
YJR061WP40355 PKP1YIL042C 1185 nt15.95■□□□□ 0.14
YJR061WP40355 RPP1BYDL130W 321 nt15.85■□□□□ 0.13
YJR061WP40355 SCJ1YMR214W 1134 nt15.85■□□□□ 0.13
YJR061WP40355 TRN1tP(UGG)A 72 nt15.63■□□□□ 0.09
YJR061WP40355 SUF9tP(UGG)F 72 nt15.63■□□□□ 0.09
YJR061WP40355 SUF8tP(UGG)H 72 nt15.63■□□□□ 0.09
YJR061WP40355 tP(UGG)LtP(UGG)L 72 nt15.63■□□□□ 0.09
YJR061WP40355 SUF7tP(UGG)M 72 nt15.63■□□□□ 0.09
YJR061WP40355 tP(UGG)N1tP(UGG)N1 72 nt15.63■□□□□ 0.09
YJR061WP40355 tP(UGG)N2tP(UGG)N2 72 nt15.63■□□□□ 0.09
YJR061WP40355 tP(UGG)O1tP(UGG)O1 72 nt15.63■□□□□ 0.09
YJR061WP40355 SUF11tP(UGG)O2 72 nt15.63■□□□□ 0.09
YJR061WP40355 ATS1YAL020C 1002 nt15.58■□□□□ 0.08
YJR061WP40355 YBR190WYBR190W 312 nt15.55■□□□□ 0.08
YJR061WP40355 CCC1YLR220W 969 nt15.5■□□□□ 0.07
YJR061WP40355 RTC3YHR087W 336 nt15.24■□□□□ 0.03
YJR061WP40355 SCR1SCR1 522 nt15.1■□□□□ 0.01
YJR061WP40355 PET122YER153C 765 nt15.06■□□□□ 0
YJR061WP40355 RVS167YDR388W 1449 nt15.06■□□□□ 0
YJR061WP40355 tP(UGG)O3tP(UGG)O3 72 nt14.89□□□□□ -0.03
YJR061WP40355 RRN5YLR141W 1092 nt14.68□□□□□ -0.06
YJR061WP40355 RSB1YOR049C 1065 nt14.52□□□□□ -0.09
YJR061WP40355 SHR5YOL110W 714 nt14.48□□□□□ -0.09
YJR061WP40355 YDJ1YNL064C 1230 nt14.43□□□□□ -0.1
YJR061WP40355 SSA3YBL075C 1950 nt14.42□□□□□ -0.1
YJR061WP40355 YER088W-BYER088W-B 147 nt14.39□□□□□ -0.11
YJR061WP40355 PST2YDR032C 597 nt14.35□□□□□ -0.11
YJR061WP40355 PUT4YOR348C 1884 nt14.23□□□□□ -0.13
YJR061WP40355 URN1YPR152C 1398 nt14.19□□□□□ -0.14
YJR061WP40355 DEP1YAL013W 1218 nt14.15□□□□□ -0.14
YJR061WP40355 YKL097CYKL097C 411 nt14.03□□□□□ -0.16
YJR061WP40355 GAR1YHR089C 618 nt14.02□□□□□ -0.17
YJR061WP40355 OPI9YLR338W 858 nt13.99□□□□□ -0.17
YJR061WP40355 SAH1YER043C 1350 nt13.96□□□□□ -0.17
YJR061WP40355 RPN10YHR200W 807 nt13.94□□□□□ -0.18
YJR061WP40355 ARE1YCR048W 1833 nt13.93□□□□□ -0.18
YJR061WP40355 YNL208WYNL208W 600 nt13.89□□□□□ -0.19
YJR061WP40355 POA1YBR022W 534 nt13.81□□□□□ -0.2
YJR061WP40355 YHR049C-AYHR049C-A 297 nt13.79□□□□□ -0.2
YJR061WP40355 SHU1YHL006C 453 nt13.66□□□□□ -0.22
YJR061WP40355 PUN1YLR414C 792 nt13.6□□□□□ -0.23
YJR061WP40355 TIR1YER011W 765 nt13.54□□□□□ -0.24
YJR061WP40355 BSC6YOL137W 1494 nt13.54□□□□□ -0.24
YJR061WP40355 YJR018WYJR018W 363 nt13.52□□□□□ -0.25
YJR061WP40355 PTC2YER089C 1395 nt13.47□□□□□ -0.25
YJR061WP40355 BUD23YCR047C 828 nt13.47□□□□□ -0.25
YJR061WP40355 SSA1YAL005C 1929 nt13.37□□□□□ -0.27
YJR061WP40355 YAL037C-BYAL037C-B 975 nt13.31□□□□□ -0.28
YJR061WP40355 YOR139CYOR139C 393 nt13.31□□□□□ -0.28
YJR061WP40355 NAB2YGL122C 1578 nt13.3□□□□□ -0.28
YJR061WP40355 YJR120WYJR120W 351 nt13.26□□□□□ -0.29
YJR061WP40355 NPL3YDR432W 1245 nt13.22□□□□□ -0.29
YJR061WP40355 RPP2BYDR382W 333 nt13.21□□□□□ -0.29
YJR061WP40355 SRB2YHR041C 633 nt13.12□□□□□ -0.31
YJR061WP40355 YGR021WYGR021W 873 nt13.11□□□□□ -0.31
YJR061WP40355 FPR4YLR449W 1179 nt13.11□□□□□ -0.31
YJR061WP40355 FIS1YIL065C 468 nt13.1□□□□□ -0.31
YJR061WP40355 DAL1YIR027C 1383 nt13.09□□□□□ -0.31
YJR061WP40355 INM2YDR287W 879 nt13.05□□□□□ -0.32
YJR061WP40355 HOM6YJR139C 1080 nt13□□□□□ -0.33
YJR061WP40355 SPT5YML010W 3192 nt13□□□□□ -0.33
YJR061WP40355 PHO4YFR034C 939 nt12.98□□□□□ -0.33
YJR061WP40355 YOL037CYOL037C 354 nt12.98□□□□□ -0.33
YJR061WP40355 WWM1YFL010C 636 nt12.97□□□□□ -0.33
YJR061WP40355 MNP1YGL068W 585 nt12.95□□□□□ -0.34
YJR061WP40355 YBL100CYBL100C 315 nt12.92□□□□□ -0.34
YJR061WP40355 BDH2YAL061W 1254 nt12.9□□□□□ -0.34
YJR061WP40355 Q0182Q0182 405 nt12.84□□□□□ -0.35
YJR061WP40355 YFL021C-AYFL021C-A 855 nt12.82□□□□□ -0.36
YJR061WP40355 RKM5YLR137W 1104 nt12.82□□□□□ -0.36
YJR061WP40355 SSA4YER103W 1929 nt12.82□□□□□ -0.36
YJR061WP40355 tM(CAU)CtM(CAU)C 72 nt12.79□□□□□ -0.36
YJR061WP40355 IMT4tM(CAU)E 72 nt12.79□□□□□ -0.36
YJR061WP40355 IMT3tM(CAU)J3 72 nt12.79□□□□□ -0.36
YJR061WP40355 IMT1tM(CAU)O1 72 nt12.79□□□□□ -0.36
YJR061WP40355 IMT2tM(CAU)P 72 nt12.79□□□□□ -0.36
YJR061WP40355 YPS1YLR120C 1710 nt12.76□□□□□ -0.37
YJR061WP40355 FUN26YAL022C 1554 nt12.75□□□□□ -0.37
YJR061WP40355 MEP2YNL142W 1500 nt12.71□□□□□ -0.38
YJR061WP40355 TRM9YML014W 840 nt12.7□□□□□ -0.38
YJR061WP40355 LSM3YLR438C-A 270 nt12.69□□□□□ -0.38
YJR061WP40355 YDR095CYDR095C 411 nt12.68□□□□□ -0.38
YJR061WP40355 YHR165W-AYHR165W-A 312 nt12.68□□□□□ -0.38
YJR061WP40355 ALF1YNL148C 765 nt12.63□□□□□ -0.39
YJR061WP40355 YLR281CYLR281C 468 nt12.6□□□□□ -0.39
YJR061WP40355 PUS2YGL063W 1113 nt12.59□□□□□ -0.39
YJR061WP40355 CCT6YDR188W 1641 nt12.55□□□□□ -0.4
YJR061WP40355 DCW1YKL046C 1350 nt12.52□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms