Protein–RNA interactions for Protein: P53334

SCW4, Probable family 17 glucosidase SCW4, yeastyeast

Known RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCW4P53334 NSR1YGR159C 1245 nt17.7■□□□□ 0.42
SCW4P53334 YML009W-BYML009W-B 477 nt17.54■□□□□ 0.4
SCW4P53334 NOP1YDL014W 984 nt16.95■□□□□ 0.3
SCW4P53334 MDJ1YFL016C 1536 nt15.99■□□□□ 0.15
SCW4P53334 YKL036CYKL036C 393 nt15.32■□□□□ 0.04
SCW4P53334 SRX1YKL086W 384 nt14.78□□□□□ -0.04
SCW4P53334 YJL027CYJL027C 417 nt14.77□□□□□ -0.05
SCW4P53334 Q0297Q0297 156 nt14.7□□□□□ -0.06
SCW4P53334 YCR051WYCR051W 669 nt14.01□□□□□ -0.17
SCW4P53334 DBP2YNL112W 1641 nt13.99□□□□□ -0.17
SCW4P53334 SCS3YGL126W 1143 nt13.75□□□□□ -0.21
SCW4P53334 YBR190WYBR190W 312 nt13.74□□□□□ -0.21
SCW4P53334 TRN1tP(UGG)A 72 nt13.54□□□□□ -0.24
SCW4P53334 SUF9tP(UGG)F 72 nt13.54□□□□□ -0.24
SCW4P53334 SUF8tP(UGG)H 72 nt13.54□□□□□ -0.24
SCW4P53334 tP(UGG)LtP(UGG)L 72 nt13.54□□□□□ -0.24
SCW4P53334 SUF7tP(UGG)M 72 nt13.54□□□□□ -0.24
SCW4P53334 tP(UGG)N1tP(UGG)N1 72 nt13.54□□□□□ -0.24
SCW4P53334 tP(UGG)N2tP(UGG)N2 72 nt13.54□□□□□ -0.24
SCW4P53334 tP(UGG)O1tP(UGG)O1 72 nt13.54□□□□□ -0.24
SCW4P53334 SUF11tP(UGG)O2 72 nt13.54□□□□□ -0.24
SCW4P53334 RTC3YHR087W 336 nt13.43□□□□□ -0.26
SCW4P53334 CCC1YLR220W 969 nt13.4□□□□□ -0.26
SCW4P53334 YOL085CYOL085C 342 nt13.26□□□□□ -0.29
SCW4P53334 RPP1BYDL130W 321 nt13.2□□□□□ -0.3
SCW4P53334 RVS167YDR388W 1449 nt13.17□□□□□ -0.3
SCW4P53334 PKP1YIL042C 1185 nt13.09□□□□□ -0.31
SCW4P53334 SCJ1YMR214W 1134 nt12.96□□□□□ -0.33
SCW4P53334 tP(UGG)O3tP(UGG)O3 72 nt12.71□□□□□ -0.37
SCW4P53334 PUT4YOR348C 1884 nt12.68□□□□□ -0.38
SCW4P53334 PET122YER153C 765 nt12.63□□□□□ -0.39
SCW4P53334 SHR5YOL110W 714 nt12.6□□□□□ -0.39
SCW4P53334 SSA3YBL075C 1950 nt12.57□□□□□ -0.4
SCW4P53334 SCR1SCR1 522 nt12.45□□□□□ -0.42
SCW4P53334 URN1YPR152C 1398 nt12.43□□□□□ -0.42
SCW4P53334 ARE1YCR048W 1833 nt12.35□□□□□ -0.43
SCW4P53334 DEP1YAL013W 1218 nt12.33□□□□□ -0.44
SCW4P53334 OPI9YLR338W 858 nt12.33□□□□□ -0.44
SCW4P53334 SAH1YER043C 1350 nt12.31□□□□□ -0.44
SCW4P53334 YDJ1YNL064C 1230 nt12.31□□□□□ -0.44
SCW4P53334 POA1YBR022W 534 nt12.27□□□□□ -0.45
SCW4P53334 RPN10YHR200W 807 nt12.24□□□□□ -0.45
SCW4P53334 YHR049C-AYHR049C-A 297 nt12.23□□□□□ -0.45
SCW4P53334 RRN5YLR141W 1092 nt12.23□□□□□ -0.45
SCW4P53334 ATS1YAL020C 1002 nt12.22□□□□□ -0.45
SCW4P53334 YNL208WYNL208W 600 nt12.13□□□□□ -0.47
SCW4P53334 GAR1YHR089C 618 nt12.08□□□□□ -0.48
SCW4P53334 BSC6YOL137W 1494 nt12.07□□□□□ -0.48
SCW4P53334 PUN1YLR414C 792 nt12□□□□□ -0.49
SCW4P53334 YER088W-BYER088W-B 147 nt11.99□□□□□ -0.49
SCW4P53334 BUD23YCR047C 828 nt11.94□□□□□ -0.5
SCW4P53334 RSB1YOR049C 1065 nt11.91□□□□□ -0.5
SCW4P53334 PTC2YER089C 1395 nt11.87□□□□□ -0.51
SCW4P53334 YJR018WYJR018W 363 nt11.85□□□□□ -0.51
SCW4P53334 NAB2YGL122C 1578 nt11.78□□□□□ -0.52
SCW4P53334 TIR1YER011W 765 nt11.69□□□□□ -0.54
SCW4P53334 SPT5YML010W 3192 nt11.66□□□□□ -0.54
SCW4P53334 SSA1YAL005C 1929 nt11.58□□□□□ -0.55
SCW4P53334 DAL1YIR027C 1383 nt11.56□□□□□ -0.56
SCW4P53334 RPP2BYDR382W 333 nt11.56□□□□□ -0.56
SCW4P53334 YJR120WYJR120W 351 nt11.56□□□□□ -0.56
SCW4P53334 FIS1YIL065C 468 nt11.55□□□□□ -0.56
SCW4P53334 FPR4YLR449W 1179 nt11.53□□□□□ -0.56
SCW4P53334 INM2YDR287W 879 nt11.49□□□□□ -0.57
SCW4P53334 PHO4YFR034C 939 nt11.44□□□□□ -0.58
SCW4P53334 SSA4YER103W 1929 nt11.44□□□□□ -0.58
SCW4P53334 MEP2YNL142W 1500 nt11.36□□□□□ -0.59
SCW4P53334 PST2YDR032C 597 nt11.35□□□□□ -0.59
SCW4P53334 YBL100CYBL100C 315 nt11.32□□□□□ -0.6
SCW4P53334 YPS1YLR120C 1710 nt11.32□□□□□ -0.6
SCW4P53334 SRB2YHR041C 633 nt11.29□□□□□ -0.6
SCW4P53334 BDH2YAL061W 1254 nt11.25□□□□□ -0.61
SCW4P53334 YHR165W-AYHR165W-A 312 nt11.24□□□□□ -0.61
SCW4P53334 YDR095CYDR095C 411 nt11.21□□□□□ -0.61
SCW4P53334 FUN26YAL022C 1554 nt11.16□□□□□ -0.62
SCW4P53334 DCW1YKL046C 1350 nt11.16□□□□□ -0.62
SCW4P53334 ALF1YNL148C 765 nt11.11□□□□□ -0.63
SCW4P53334 WWM1YFL010C 636 nt11.1□□□□□ -0.63
SCW4P53334 TRM9YML014W 840 nt11.1□□□□□ -0.63
SCW4P53334 LSM3YLR438C-A 270 nt11.05□□□□□ -0.64
SCW4P53334 EMI2YDR516C 1503 nt11.04□□□□□ -0.64
SCW4P53334 YMR090WYMR090W 684 nt11.03□□□□□ -0.64
SCW4P53334 RPP2AYOL039W 321 nt11.01□□□□□ -0.65
SCW4P53334 BDF1YLR399C 2061 nt10.99□□□□□ -0.65
SCW4P53334 CCT6YDR188W 1641 nt10.99□□□□□ -0.65
SCW4P53334 YGR021WYGR021W 873 nt10.99□□□□□ -0.65
SCW4P53334 YFL021C-AYFL021C-A 855 nt10.96□□□□□ -0.65
SCW4P53334 SUF2tP(AGG)C 72 nt10.96□□□□□ -0.65
SCW4P53334 SUF10tP(AGG)N 72 nt10.96□□□□□ -0.65
SCW4P53334 SHU1YHL006C 453 nt10.96□□□□□ -0.65
SCW4P53334 PTP1YDL230W 1008 nt10.95□□□□□ -0.66
SCW4P53334 YDL221WYDL221W 552 nt10.94□□□□□ -0.66
SCW4P53334 CAC2YML102W 1407 nt10.92□□□□□ -0.66
SCW4P53334 YBR220CYBR220C 1683 nt10.91□□□□□ -0.66
SCW4P53334 SIS1YNL007C 1059 nt10.9□□□□□ -0.66
SCW4P53334 HOM6YJR139C 1080 nt10.89□□□□□ -0.67
SCW4P53334 YAL037C-BYAL037C-B 975 nt10.88□□□□□ -0.67
SCW4P53334 TAT1YBR069C 1860 nt10.87□□□□□ -0.67
SCW4P53334 SDH1YKL148C 1923 nt10.84□□□□□ -0.67
SCW4P53334 MNP1YGL068W 585 nt10.79□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms