Protein–RNA interactions for Protein: P46962

CTK2, CTD kinase subunit beta, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK2P46962 NSR1YGR159C 1245 nt17.71■□□□□ 0.43
CTK2P46962 YML009W-BYML009W-B 477 nt17.7■□□□□ 0.42
CTK2P46962 NOP1YDL014W 984 nt17.13■□□□□ 0.33
CTK2P46962 MDJ1YFL016C 1536 nt15.88■□□□□ 0.13
CTK2P46962 YKL036CYKL036C 393 nt15.68■□□□□ 0.1
CTK2P46962 SRX1YKL086W 384 nt14.97□□□□□ -0.01
CTK2P46962 Q0297Q0297 156 nt14.95□□□□□ -0.02
CTK2P46962 YJL027CYJL027C 417 nt14.64□□□□□ -0.07
CTK2P46962 YCR051WYCR051W 669 nt14.19□□□□□ -0.14
CTK2P46962 SCS3YGL126W 1143 nt14.19□□□□□ -0.14
CTK2P46962 DBP2YNL112W 1641 nt13.98□□□□□ -0.17
CTK2P46962 TRN1tP(UGG)A 72 nt13.64□□□□□ -0.23
CTK2P46962 SUF9tP(UGG)F 72 nt13.64□□□□□ -0.23
CTK2P46962 SUF8tP(UGG)H 72 nt13.64□□□□□ -0.23
CTK2P46962 tP(UGG)LtP(UGG)L 72 nt13.64□□□□□ -0.23
CTK2P46962 SUF7tP(UGG)M 72 nt13.64□□□□□ -0.23
CTK2P46962 tP(UGG)N1tP(UGG)N1 72 nt13.64□□□□□ -0.23
CTK2P46962 tP(UGG)N2tP(UGG)N2 72 nt13.64□□□□□ -0.23
CTK2P46962 tP(UGG)O1tP(UGG)O1 72 nt13.64□□□□□ -0.23
CTK2P46962 SUF11tP(UGG)O2 72 nt13.64□□□□□ -0.23
CTK2P46962 YOL085CYOL085C 342 nt13.57□□□□□ -0.24
CTK2P46962 YBR190WYBR190W 312 nt13.57□□□□□ -0.24
CTK2P46962 CCC1YLR220W 969 nt13.48□□□□□ -0.25
CTK2P46962 RPP1BYDL130W 321 nt13.41□□□□□ -0.26
CTK2P46962 PKP1YIL042C 1185 nt13.39□□□□□ -0.27
CTK2P46962 RTC3YHR087W 336 nt13.25□□□□□ -0.29
CTK2P46962 RVS167YDR388W 1449 nt13.12□□□□□ -0.31
CTK2P46962 SCJ1YMR214W 1134 nt13.03□□□□□ -0.32
CTK2P46962 PET122YER153C 765 nt12.84□□□□□ -0.35
CTK2P46962 tP(UGG)O3tP(UGG)O3 72 nt12.84□□□□□ -0.35
CTK2P46962 SCR1SCR1 522 nt12.66□□□□□ -0.38
CTK2P46962 ATS1YAL020C 1002 nt12.63□□□□□ -0.39
CTK2P46962 SHR5YOL110W 714 nt12.63□□□□□ -0.39
CTK2P46962 PUT4YOR348C 1884 nt12.44□□□□□ -0.42
CTK2P46962 RRN5YLR141W 1092 nt12.44□□□□□ -0.42
CTK2P46962 YDJ1YNL064C 1230 nt12.43□□□□□ -0.42
CTK2P46962 URN1YPR152C 1398 nt12.37□□□□□ -0.43
CTK2P46962 DEP1YAL013W 1218 nt12.31□□□□□ -0.44
CTK2P46962 OPI9YLR338W 858 nt12.22□□□□□ -0.45
CTK2P46962 YER088W-BYER088W-B 147 nt12.2□□□□□ -0.46
CTK2P46962 SAH1YER043C 1350 nt12.18□□□□□ -0.46
CTK2P46962 ARE1YCR048W 1833 nt12.17□□□□□ -0.46
CTK2P46962 Q0182Q0182 405 nt12.17□□□□□ -0.46
CTK2P46962 GAR1YHR089C 618 nt12.17□□□□□ -0.46
CTK2P46962 RPN10YHR200W 807 nt12.15□□□□□ -0.46
CTK2P46962 RSB1YOR049C 1065 nt12.15□□□□□ -0.46
CTK2P46962 YNL208WYNL208W 600 nt12.1□□□□□ -0.47
CTK2P46962 SSA3YBL075C 1950 nt12.06□□□□□ -0.48
CTK2P46962 POA1YBR022W 534 nt12.04□□□□□ -0.48
CTK2P46962 YHR049C-AYHR049C-A 297 nt12.03□□□□□ -0.48
CTK2P46962 PUN1YLR414C 792 nt11.87□□□□□ -0.51
CTK2P46962 BSC6YOL137W 1494 nt11.81□□□□□ -0.52
CTK2P46962 TIR1YER011W 765 nt11.78□□□□□ -0.52
CTK2P46962 YJR018WYJR018W 363 nt11.78□□□□□ -0.52
CTK2P46962 BUD23YCR047C 828 nt11.73□□□□□ -0.53
CTK2P46962 PTC2YER089C 1395 nt11.73□□□□□ -0.53
CTK2P46962 PST2YDR032C 597 nt11.72□□□□□ -0.53
CTK2P46962 SSA1YAL005C 1929 nt11.66□□□□□ -0.54
CTK2P46962 MOT3YMR070W 1473 nt11.65□□□□□ -0.54
CTK2P46962 NAB2YGL122C 1578 nt11.61□□□□□ -0.55
CTK2P46962 YJR120WYJR120W 351 nt11.58□□□□□ -0.56
CTK2P46962 RPP2BYDR382W 333 nt11.51□□□□□ -0.57
CTK2P46962 FIS1YIL065C 468 nt11.45□□□□□ -0.58
CTK2P46962 SRB2YHR041C 633 nt11.44□□□□□ -0.58
CTK2P46962 DAL1YIR027C 1383 nt11.43□□□□□ -0.58
CTK2P46962 FPR4YLR449W 1179 nt11.39□□□□□ -0.59
CTK2P46962 INM2YDR287W 879 nt11.37□□□□□ -0.59
CTK2P46962 SPT5YML010W 3192 nt11.34□□□□□ -0.59
CTK2P46962 PHO4YFR034C 939 nt11.33□□□□□ -0.6
CTK2P46962 SHU1YHL006C 453 nt11.29□□□□□ -0.6
CTK2P46962 BDH2YAL061W 1254 nt11.26□□□□□ -0.61
CTK2P46962 YBL100CYBL100C 315 nt11.26□□□□□ -0.61
CTK2P46962 WWM1YFL010C 636 nt11.23□□□□□ -0.61
CTK2P46962 YKL097CYKL097C 411 nt11.19□□□□□ -0.62
CTK2P46962 YPS1YLR120C 1710 nt11.15□□□□□ -0.62
CTK2P46962 YAL037C-BYAL037C-B 975 nt11.15□□□□□ -0.62
CTK2P46962 YGR021WYGR021W 873 nt11.12□□□□□ -0.63
CTK2P46962 FUN26YAL022C 1554 nt11.11□□□□□ -0.63
CTK2P46962 MEP2YNL142W 1500 nt11.09□□□□□ -0.63
CTK2P46962 HOM6YJR139C 1080 nt11.08□□□□□ -0.64
CTK2P46962 YDR095CYDR095C 411 nt11.07□□□□□ -0.64
CTK2P46962 LSM3YLR438C-A 270 nt11.07□□□□□ -0.64
CTK2P46962 TRM9YML014W 840 nt11.06□□□□□ -0.64
CTK2P46962 YFL021C-AYFL021C-A 855 nt11.05□□□□□ -0.64
CTK2P46962 YHR165W-AYHR165W-A 312 nt11.05□□□□□ -0.64
CTK2P46962 MNP1YGL068W 585 nt11.01□□□□□ -0.65
CTK2P46962 SSA4YER103W 1929 nt11.01□□□□□ -0.65
CTK2P46962 ALF1YNL148C 765 nt10.99□□□□□ -0.65
CTK2P46962 CCT6YDR188W 1641 nt10.97□□□□□ -0.65
CTK2P46962 DCW1YKL046C 1350 nt10.92□□□□□ -0.66
CTK2P46962 RKM5YLR137W 1104 nt10.92□□□□□ -0.66
CTK2P46962 SUF2tP(AGG)C 72 nt10.89□□□□□ -0.67
CTK2P46962 SUF10tP(AGG)N 72 nt10.89□□□□□ -0.67
CTK2P46962 RPP2AYOL039W 321 nt10.85□□□□□ -0.67
CTK2P46962 PTP1YDL230W 1008 nt10.82□□□□□ -0.68
CTK2P46962 SIS1YNL007C 1059 nt10.82□□□□□ -0.68
CTK2P46962 EMI2YDR516C 1503 nt10.79□□□□□ -0.68
CTK2P46962 YOL037CYOL037C 354 nt10.78□□□□□ -0.68
CTK2P46962 YOR139CYOR139C 393 nt10.77□□□□□ -0.69
CTK2P46962 CAC2YML102W 1407 nt10.75□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms