Protein–RNA interactions for Protein: P11938

RAP1, DNA-binding protein RAP1, yeastyeast

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAP1P11938 NSR1YGR159C 1245 nt19.41■□□□□ 0.7
RAP1P11938 YML009W-BYML009W-B 477 nt19.4■□□□□ 0.7
RAP1P11938 NOP1YDL014W 984 nt18.68■□□□□ 0.58
RAP1P11938 MDJ1YFL016C 1536 nt17.59■□□□□ 0.41
RAP1P11938 YKL036CYKL036C 393 nt17.01■□□□□ 0.31
RAP1P11938 SRX1YKL086W 384 nt16.31■□□□□ 0.2
RAP1P11938 Q0297Q0297 156 nt16.24■□□□□ 0.19
RAP1P11938 YJL027CYJL027C 417 nt16.17■□□□□ 0.18
RAP1P11938 YCR051WYCR051W 669 nt15.55■□□□□ 0.08
RAP1P11938 DBP2YNL112W 1641 nt15.39■□□□□ 0.05
RAP1P11938 SCS3YGL126W 1143 nt15.36■□□□□ 0.05
RAP1P11938 YBR190WYBR190W 312 nt14.98□□□□□ -0.01
RAP1P11938 TRN1tP(UGG)A 72 nt14.91□□□□□ -0.02
RAP1P11938 SUF9tP(UGG)F 72 nt14.91□□□□□ -0.02
RAP1P11938 SUF8tP(UGG)H 72 nt14.91□□□□□ -0.02
RAP1P11938 tP(UGG)LtP(UGG)L 72 nt14.91□□□□□ -0.02
RAP1P11938 SUF7tP(UGG)M 72 nt14.91□□□□□ -0.02
RAP1P11938 tP(UGG)N1tP(UGG)N1 72 nt14.91□□□□□ -0.02
RAP1P11938 tP(UGG)N2tP(UGG)N2 72 nt14.91□□□□□ -0.02
RAP1P11938 tP(UGG)O1tP(UGG)O1 72 nt14.91□□□□□ -0.02
RAP1P11938 SUF11tP(UGG)O2 72 nt14.91□□□□□ -0.02
RAP1P11938 CCC1YLR220W 969 nt14.87□□□□□ -0.03
RAP1P11938 YOL085CYOL085C 342 nt14.75□□□□□ -0.05
RAP1P11938 RTC3YHR087W 336 nt14.74□□□□□ -0.05
RAP1P11938 PKP1YIL042C 1185 nt14.65□□□□□ -0.06
RAP1P11938 RPP1BYDL130W 321 nt14.61□□□□□ -0.07
RAP1P11938 SSA3YBL075C 1950 nt14.43□□□□□ -0.1
RAP1P11938 RVS167YDR388W 1449 nt14.41□□□□□ -0.1
RAP1P11938 SCJ1YMR214W 1134 nt14.32□□□□□ -0.12
RAP1P11938 tP(UGG)O3tP(UGG)O3 72 nt14.04□□□□□ -0.16
RAP1P11938 PET122YER153C 765 nt14.02□□□□□ -0.17
RAP1P11938 PUT4YOR348C 1884 nt13.92□□□□□ -0.18
RAP1P11938 SHR5YOL110W 714 nt13.83□□□□□ -0.2
RAP1P11938 SCR1SCR1 522 nt13.77□□□□□ -0.21
RAP1P11938 URN1YPR152C 1398 nt13.66□□□□□ -0.22
RAP1P11938 DEP1YAL013W 1218 nt13.65□□□□□ -0.22
RAP1P11938 ATS1YAL020C 1002 nt13.65□□□□□ -0.22
RAP1P11938 RRN5YLR141W 1092 nt13.59□□□□□ -0.23
RAP1P11938 YDJ1YNL064C 1230 nt13.54□□□□□ -0.24
RAP1P11938 SAH1YER043C 1350 nt13.51□□□□□ -0.25
RAP1P11938 ARE1YCR048W 1833 nt13.49□□□□□ -0.25
RAP1P11938 OPI9YLR338W 858 nt13.47□□□□□ -0.25
RAP1P11938 POA1YBR022W 534 nt13.45□□□□□ -0.26
RAP1P11938 YHR049C-AYHR049C-A 297 nt13.37□□□□□ -0.27
RAP1P11938 GAR1YHR089C 618 nt13.37□□□□□ -0.27
RAP1P11938 RPN10YHR200W 807 nt13.35□□□□□ -0.27
RAP1P11938 YER088W-BYER088W-B 147 nt13.3□□□□□ -0.28
RAP1P11938 YNL208WYNL208W 600 nt13.3□□□□□ -0.28
RAP1P11938 RSB1YOR049C 1065 nt13.26□□□□□ -0.29
RAP1P11938 BSC6YOL137W 1494 nt13.25□□□□□ -0.29
RAP1P11938 SPT5YML010W 3192 nt13.09□□□□□ -0.31
RAP1P11938 BUD23YCR047C 828 nt13.09□□□□□ -0.31
RAP1P11938 PUN1YLR414C 792 nt13.07□□□□□ -0.32
RAP1P11938 PTC2YER089C 1395 nt13.01□□□□□ -0.33
RAP1P11938 YJR018WYJR018W 363 nt13□□□□□ -0.33
RAP1P11938 SSA4YER103W 1929 nt12.9□□□□□ -0.34
RAP1P11938 TIR1YER011W 765 nt12.9□□□□□ -0.34
RAP1P11938 NAB2YGL122C 1578 nt12.83□□□□□ -0.36
RAP1P11938 SSA1YAL005C 1929 nt12.8□□□□□ -0.36
RAP1P11938 YJR120WYJR120W 351 nt12.73□□□□□ -0.37
RAP1P11938 FPR4YLR449W 1179 nt12.69□□□□□ -0.38
RAP1P11938 PST2YDR032C 597 nt12.66□□□□□ -0.38
RAP1P11938 RPP2BYDR382W 333 nt12.66□□□□□ -0.38
RAP1P11938 FIS1YIL065C 468 nt12.63□□□□□ -0.39
RAP1P11938 DAL1YIR027C 1383 nt12.62□□□□□ -0.39
RAP1P11938 SRB2YHR041C 633 nt12.57□□□□□ -0.4
RAP1P11938 INM2YDR287W 879 nt12.53□□□□□ -0.4
RAP1P11938 PHO4YFR034C 939 nt12.52□□□□□ -0.41
RAP1P11938 MEP2YNL142W 1500 nt12.51□□□□□ -0.41
RAP1P11938 BDF1YLR399C 2061 nt12.47□□□□□ -0.41
RAP1P11938 YBL100CYBL100C 315 nt12.42□□□□□ -0.42
RAP1P11938 BDH2YAL061W 1254 nt12.34□□□□□ -0.43
RAP1P11938 YPS1YLR120C 1710 nt12.34□□□□□ -0.43
RAP1P11938 WWM1YFL010C 636 nt12.32□□□□□ -0.44
RAP1P11938 DCW1YKL046C 1350 nt12.3□□□□□ -0.44
RAP1P11938 TAT1YBR069C 1860 nt12.28□□□□□ -0.44
RAP1P11938 YHR165W-AYHR165W-A 312 nt12.28□□□□□ -0.44
RAP1P11938 SHU1YHL006C 453 nt12.26□□□□□ -0.45
RAP1P11938 FUN26YAL022C 1554 nt12.26□□□□□ -0.45
RAP1P11938 YAL037C-BYAL037C-B 975 nt12.23□□□□□ -0.45
RAP1P11938 YDR095CYDR095C 411 nt12.21□□□□□ -0.45
RAP1P11938 TRM9YML014W 840 nt12.18□□□□□ -0.46
RAP1P11938 ALF1YNL148C 765 nt12.15□□□□□ -0.46
RAP1P11938 EMI2YDR516C 1503 nt12.11□□□□□ -0.47
RAP1P11938 YGR021WYGR021W 873 nt12.1□□□□□ -0.47
RAP1P11938 LSM3YLR438C-A 270 nt12.1□□□□□ -0.47
RAP1P11938 YBR220CYBR220C 1683 nt12.1□□□□□ -0.47
RAP1P11938 YMR090WYMR090W 684 nt12.08□□□□□ -0.48
RAP1P11938 YFL021C-AYFL021C-A 855 nt12.06□□□□□ -0.48
RAP1P11938 PAC11YDR488C 1602 nt12.05□□□□□ -0.48
RAP1P11938 HOM6YJR139C 1080 nt12.05□□□□□ -0.48
RAP1P11938 YKL097CYKL097C 411 nt12.05□□□□□ -0.48
RAP1P11938 MNP1YGL068W 585 nt12.03□□□□□ -0.48
RAP1P11938 CCT6YDR188W 1641 nt12.02□□□□□ -0.49
RAP1P11938 RPP2AYOL039W 321 nt12.01□□□□□ -0.49
RAP1P11938 CAC2YML102W 1407 nt11.97□□□□□ -0.49
RAP1P11938 YDL221WYDL221W 552 nt11.97□□□□□ -0.49
RAP1P11938 PTP1YDL230W 1008 nt11.97□□□□□ -0.49
RAP1P11938 SUF2tP(AGG)C 72 nt11.95□□□□□ -0.5
RAP1P11938 SUF10tP(AGG)N 72 nt11.95□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms