RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeastyeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF3YDL194W RTR1P40084 226 aaPredicted RBP5.13□□□□□ -1.59
SNF3YDL194W EMP65P40085 556 aa5.13□□□□□ -1.59
SNF3YDL194W KAP114P53067 1004 aa5.13□□□□□ -1.59
SNF3YDL194W IRC4Q03036 179 aa5.13□□□□□ -1.59
SNF3YDL194W JIP4Q03361 876 aa5.13□□□□□ -1.59
SNF3YDL194W YLR456WQ06199 204 aa5.13□□□□□ -1.59
SNF3YDL194W TSC13Q99190 310 aa5.13□□□□□ -1.59
SNF3YDL194W DPB2P24482 689 aaPredicted RBP5.12□□□□□ -1.59
SNF3YDL194W VBA3P25594 458 aa5.12□□□□□ -1.59
SNF3YDL194W MSP1P28737 362 aa5.12□□□□□ -1.59
SNF3YDL194W PRP19P32523 503 aaKnown RBP5.12□□□□□ -1.59
SNF3YDL194W COT1P32798 439 aa5.12□□□□□ -1.59
SNF3YDL194W HEL1P36113 551 aa5.12□□□□□ -1.59
SNF3YDL194W VBA5P36172 582 aa5.12□□□□□ -1.59
SNF3YDL194W SMK1P41808 388 aa5.12□□□□□ -1.59
SNF3YDL194W GZF3P42944 551 aaKnown RBP5.12□□□□□ -1.59
SNF3YDL194W ALT1P52893 592 aa5.12□□□□□ -1.59
SNF3YDL194W YGL117WP53133 265 aa5.12□□□□□ -1.59
SNF3YDL194W ART5P53244 586 aaKnown RBP5.12□□□□□ -1.59
SNF3YDL194W COQ6P53318 479 aa5.12□□□□□ -1.59
SNF3YDL194W TUB4P53378 473 aa5.12□□□□□ -1.59
SNF3YDL194W FYV6P53913 173 aa5.12□□□□□ -1.59
SNF3YDL194W ECM38Q05902 660 aaPredicted RBP5.12□□□□□ -1.59
SNF3YDL194W TFC6Q06339 672 aa5.12□□□□□ -1.59
SNF3YDL194W VPS36Q06696 566 aa5.12□□□□□ -1.59
SNF3YDL194W HAL9Q12180 1030 aa5.12□□□□□ -1.59
SNF3YDL194W PAB1P04147 577 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
SNF3YDL194W UTR1P21373 530 aa5.12□□□□□ -1.59
SNF3YDL194W CLB4P24871 460 aa5.12□□□□□ -1.59
SNF3YDL194W BOS1P25385 244 aa5.12□□□□□ -1.59
SNF3YDL194W PCL2P25693 308 aa5.12□□□□□ -1.59
SNF3YDL194W FRD1P32614 470 aaKnown RBP5.12□□□□□ -1.59
SNF3YDL194W HCS1P34243 683 aa5.12□□□□□ -1.59
SNF3YDL194W LRG1P35688 1017 aa5.12□□□□□ -1.59
SNF3YDL194W CKB2P38930 258 aa5.12□□□□□ -1.59
SNF3YDL194W YER156CP40093 338 aaKnown RBP5.12□□□□□ -1.59
SNF3YDL194W EMW1P42842 904 aaKnown RBP5.12□□□□□ -1.59
SNF3YDL194W LSG1P53145 640 aaKnown RBP5.12□□□□□ -1.59
SNF3YDL194W CAF130P53280 1122 aaPredicted RBP5.12□□□□□ -1.59
SNF3YDL194W HDA1P53973 706 aa5.12□□□□□ -1.59
SNF3YDL194W SRL4Q03085 281 aa5.12□□□□□ -1.59
SNF3YDL194W ISR1Q06098 443 aaKnown RBP5.12□□□□□ -1.59
SNF3YDL194W SIL1Q08199 421 aa5.12□□□□□ -1.59
SNF3YDL194W GRX6Q12438 231 aa5.12□□□□□ -1.59
SNF3YDL194W SSC1P0CS90 654 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W MTF2P10849 440 aa5.11□□□□□ -1.59
SNF3YDL194W TCP1P12612 559 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W SRP101P32916 621 aa5.11□□□□□ -1.59
SNF3YDL194W SLA2P33338 968 aa5.11□□□□□ -1.59
SNF3YDL194W SEA4P38164 1038 aa5.11□□□□□ -1.59
SNF3YDL194W OLA1P38219 394 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W SLI15P38283 698 aa5.11□□□□□ -1.59
SNF3YDL194W CCC2P38995 1004 aa5.11□□□□□ -1.59
SNF3YDL194W THO1P40040 218 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W ALG5P40350 334 aa5.11□□□□□ -1.59
SNF3YDL194W MVP1P40959 511 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W ALK1P43633 760 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W DSD1P53095 428 aa5.11□□□□□ -1.59
SNF3YDL194W OGG1P53397 376 aaPredicted RBP5.11□□□□□ -1.59
SNF3YDL194W KRE33P53914 1056 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SNF3YDL194W NHX1Q04121 633 aa5.11□□□□□ -1.59
SNF3YDL194W VPS38Q05919 439 aa5.11□□□□□ -1.59
SNF3YDL194W VID22Q05934 901 aa5.11□□□□□ -1.59
SNF3YDL194W YCS4Q06156 1176 aa5.11□□□□□ -1.59
SNF3YDL194W HIM1Q06674 414 aa5.11□□□□□ -1.59
SNF3YDL194W GCR1P07261 785 aa5.11□□□□□ -1.59
SNF3YDL194W RSR1P13856 272 aa5.11□□□□□ -1.59
SNF3YDL194W YAK1P14680 807 aa5.11□□□□□ -1.59
SNF3YDL194W SEC63P14906 663 aa5.11□□□□□ -1.59
SNF3YDL194W GUK1P15454 187 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W CPR5P35176 225 aa5.11□□□□□ -1.59
SNF3YDL194W YKL063CP35725 167 aa5.11□□□□□ -1.59
SNF3YDL194W YHR097CP38809 366 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W STT3P39007 718 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W EFM4P40516 257 aa5.11□□□□□ -1.59
SNF3YDL194W YFL052WP43551 465 aa5.11□□□□□ -1.59
SNF3YDL194W TMA22P47089 198 aaPredicted RBP5.11□□□□□ -1.59
SNF3YDL194W HAM1P47119 197 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W EAF7P53911 425 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W TEP1P53916 434 aa5.11□□□□□ -1.59
SNF3YDL194W BET4Q00618 327 aa5.11□□□□□ -1.59
SNF3YDL194W ARO80Q04052 950 aa5.11□□□□□ -1.59
SNF3YDL194W YLR413WQ06689 675 aa5.11□□□□□ -1.59
SNF3YDL194W PEX15Q08215 383 aa5.11□□□□□ -1.59
SNF3YDL194W SPE3Q12074 293 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W TSR3Q12094 313 aaKnown RBP5.11□□□□□ -1.59
SNF3YDL194W FUM1P08417 488 aaKnown RBP5.1□□□□□ -1.59
SNF3YDL194W GPA1P08539 472 aa5.1□□□□□ -1.59
SNF3YDL194W COX11P19516 300 aaKnown RBP5.1□□□□□ -1.59
SNF3YDL194W TRK2P28584 889 aa5.1□□□□□ -1.59
SNF3YDL194W SBA1P28707 216 aaKnown RBP5.1□□□□□ -1.59
SNF3YDL194W KTR2P33550 425 aa5.1□□□□□ -1.59
SNF3YDL194W SOH1P38633 127 aa5.1□□□□□ -1.59
SNF3YDL194W YER010CP40011 234 aa5.1□□□□□ -1.59
SNF3YDL194W SLD3P53135 668 aa5.1□□□□□ -1.59
SNF3YDL194W CBK1P53894 756 aa5.1□□□□□ -1.59
SNF3YDL194W MAK10Q02197 733 aa5.1□□□□□ -1.59
SNF3YDL194W HMO1Q03973 246 aaKnown RBP5.1□□□□□ -1.59
SNF3YDL194W HLR1Q04429 423 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms