Protein–RNA interactions for Protein: P40040

THO1, Protein THO1, yeastyeast

Known RBP Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
THO1P40040 NSR1YGR159C 1245 nt19.05■□□□□ 0.64
THO1P40040 YML009W-BYML009W-B 477 nt18.71■□□□□ 0.59
THO1P40040 NOP1YDL014W 984 nt18.03■□□□□ 0.48
THO1P40040 MDJ1YFL016C 1536 nt17.33■□□□□ 0.37
THO1P40040 YKL036CYKL036C 393 nt16.14■□□□□ 0.17
THO1P40040 YJL027CYJL027C 417 nt16■□□□□ 0.15
THO1P40040 SRX1YKL086W 384 nt15.72■□□□□ 0.11
THO1P40040 Q0297Q0297 156 nt15.59■□□□□ 0.09
THO1P40040 DBP2YNL112W 1641 nt15.11■□□□□ 0.01
THO1P40040 YBR190WYBR190W 312 nt14.96□□□□□ -0.01
THO1P40040 YCR051WYCR051W 669 nt14.86□□□□□ -0.03
THO1P40040 RTC3YHR087W 336 nt14.59□□□□□ -0.07
THO1P40040 TRN1tP(UGG)A 72 nt14.5□□□□□ -0.09
THO1P40040 SUF9tP(UGG)F 72 nt14.5□□□□□ -0.09
THO1P40040 SUF8tP(UGG)H 72 nt14.5□□□□□ -0.09
THO1P40040 tP(UGG)LtP(UGG)L 72 nt14.5□□□□□ -0.09
THO1P40040 SUF7tP(UGG)M 72 nt14.5□□□□□ -0.09
THO1P40040 tP(UGG)N1tP(UGG)N1 72 nt14.5□□□□□ -0.09
THO1P40040 tP(UGG)N2tP(UGG)N2 72 nt14.5□□□□□ -0.09
THO1P40040 tP(UGG)O1tP(UGG)O1 72 nt14.5□□□□□ -0.09
THO1P40040 SUF11tP(UGG)O2 72 nt14.5□□□□□ -0.09
THO1P40040 SCS3YGL126W 1143 nt14.4□□□□□ -0.1
THO1P40040 CCC1YLR220W 969 nt14.32□□□□□ -0.12
THO1P40040 SSA3YBL075C 1950 nt14.2□□□□□ -0.14
THO1P40040 RVS167YDR388W 1449 nt14.19□□□□□ -0.14
THO1P40040 RPP1BYDL130W 321 nt13.99□□□□□ -0.17
THO1P40040 YOL085CYOL085C 342 nt13.96□□□□□ -0.17
THO1P40040 SCJ1YMR214W 1134 nt13.94□□□□□ -0.18
THO1P40040 PUT4YOR348C 1884 nt13.92□□□□□ -0.18
THO1P40040 PKP1YIL042C 1185 nt13.78□□□□□ -0.2
THO1P40040 SHR5YOL110W 714 nt13.55□□□□□ -0.24
THO1P40040 tP(UGG)O3tP(UGG)O3 72 nt13.54□□□□□ -0.24
THO1P40040 ARE1YCR048W 1833 nt13.51□□□□□ -0.25
THO1P40040 URN1YPR152C 1398 nt13.46□□□□□ -0.25
THO1P40040 POA1YBR022W 534 nt13.44□□□□□ -0.26
THO1P40040 PET122YER153C 765 nt13.39□□□□□ -0.27
THO1P40040 OPI9YLR338W 858 nt13.39□□□□□ -0.27
THO1P40040 SAH1YER043C 1350 nt13.39□□□□□ -0.27
THO1P40040 YHR049C-AYHR049C-A 297 nt13.37□□□□□ -0.27
THO1P40040 DEP1YAL013W 1218 nt13.28□□□□□ -0.28
THO1P40040 BSC6YOL137W 1494 nt13.26□□□□□ -0.29
THO1P40040 RPN10YHR200W 807 nt13.22□□□□□ -0.29
THO1P40040 SCR1SCR1 522 nt13.17□□□□□ -0.3
THO1P40040 YDJ1YNL064C 1230 nt13.14□□□□□ -0.31
THO1P40040 YNL208WYNL208W 600 nt13.08□□□□□ -0.32
THO1P40040 BUD23YCR047C 828 nt13.02□□□□□ -0.33
THO1P40040 PUN1YLR414C 792 nt13.02□□□□□ -0.33
THO1P40040 SPT5YML010W 3192 nt12.96□□□□□ -0.33
THO1P40040 RRN5YLR141W 1092 nt12.95□□□□□ -0.34
THO1P40040 PTC2YER089C 1395 nt12.9□□□□□ -0.34
THO1P40040 GAR1YHR089C 618 nt12.88□□□□□ -0.35
THO1P40040 NAB2YGL122C 1578 nt12.83□□□□□ -0.36
THO1P40040 YJR018WYJR018W 363 nt12.83□□□□□ -0.36
THO1P40040 SSA4YER103W 1929 nt12.78□□□□□ -0.36
THO1P40040 ATS1YAL020C 1002 nt12.73□□□□□ -0.37
THO1P40040 YER088W-BYER088W-B 147 nt12.69□□□□□ -0.38
THO1P40040 FIS1YIL065C 468 nt12.58□□□□□ -0.4
THO1P40040 DAL1YIR027C 1383 nt12.56□□□□□ -0.4
THO1P40040 RSB1YOR049C 1065 nt12.55□□□□□ -0.4
THO1P40040 MEP2YNL142W 1500 nt12.51□□□□□ -0.41
THO1P40040 TIR1YER011W 765 nt12.5□□□□□ -0.41
THO1P40040 FPR4YLR449W 1179 nt12.5□□□□□ -0.41
THO1P40040 RPP2BYDR382W 333 nt12.47□□□□□ -0.41
THO1P40040 YJR120WYJR120W 351 nt12.47□□□□□ -0.41
THO1P40040 INM2YDR287W 879 nt12.46□□□□□ -0.41
THO1P40040 PHO4YFR034C 939 nt12.44□□□□□ -0.42
THO1P40040 SSA1YAL005C 1929 nt12.41□□□□□ -0.42
THO1P40040 YPS1YLR120C 1710 nt12.37□□□□□ -0.43
THO1P40040 BDF1YLR399C 2061 nt12.31□□□□□ -0.44
THO1P40040 YHR165W-AYHR165W-A 312 nt12.28□□□□□ -0.44
THO1P40040 DCW1YKL046C 1350 nt12.26□□□□□ -0.45
THO1P40040 YBL100CYBL100C 315 nt12.24□□□□□ -0.45
THO1P40040 YDR095CYDR095C 411 nt12.22□□□□□ -0.45
THO1P40040 TAT1YBR069C 1860 nt12.17□□□□□ -0.46
THO1P40040 YMR090WYMR090W 684 nt12.15□□□□□ -0.46
THO1P40040 EMI2YDR516C 1503 nt12.13□□□□□ -0.47
THO1P40040 BDH2YAL061W 1254 nt12.11□□□□□ -0.47
THO1P40040 FUN26YAL022C 1554 nt12.06□□□□□ -0.48
THO1P40040 YBR220CYBR220C 1683 nt12.06□□□□□ -0.48
THO1P40040 SRB2YHR041C 633 nt12.05□□□□□ -0.48
THO1P40040 ALF1YNL148C 765 nt12.03□□□□□ -0.48
THO1P40040 YDL221WYDL221W 552 nt12.01□□□□□ -0.49
THO1P40040 RPP2AYOL039W 321 nt11.99□□□□□ -0.49
THO1P40040 TRM9YML014W 840 nt11.97□□□□□ -0.49
THO1P40040 PTP1YDL230W 1008 nt11.95□□□□□ -0.5
THO1P40040 SDH1YKL148C 1923 nt11.95□□□□□ -0.5
THO1P40040 CAC2YML102W 1407 nt11.93□□□□□ -0.5
THO1P40040 CCT6YDR188W 1641 nt11.87□□□□□ -0.51
THO1P40040 PST2YDR032C 597 nt11.87□□□□□ -0.51
THO1P40040 LSM3YLR438C-A 270 nt11.87□□□□□ -0.51
THO1P40040 SUF2tP(AGG)C 72 nt11.85□□□□□ -0.51
THO1P40040 SUF10tP(AGG)N 72 nt11.85□□□□□ -0.51
THO1P40040 WWM1YFL010C 636 nt11.83□□□□□ -0.52
THO1P40040 SIS1YNL007C 1059 nt11.83□□□□□ -0.52
THO1P40040 SCC4YER147C 1875 nt11.8□□□□□ -0.52
THO1P40040 IRC15YPL017C 1500 nt11.76□□□□□ -0.53
THO1P40040 SEC11YIR022W 504 nt11.76□□□□□ -0.53
THO1P40040 PCH2YBR186W 1695 nt11.72□□□□□ -0.53
THO1P40040 YFL021C-AYFL021C-A 855 nt11.7□□□□□ -0.54
THO1P40040 GIS3YLR094C 1509 nt11.7□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 8.4 ms