Protein–RNA interactions for Protein: P53135

SLD3, DNA replication regulator SLD3, yeastyeast

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLD3P53135 NSR1YGR159C 1245 nt18.67■□□□□ 0.58
SLD3P53135 YML009W-BYML009W-B 477 nt18.31■□□□□ 0.52
SLD3P53135 NOP1YDL014W 984 nt17.57■□□□□ 0.4
SLD3P53135 MDJ1YFL016C 1536 nt17.1■□□□□ 0.33
SLD3P53135 YJL027CYJL027C 417 nt15.73■□□□□ 0.11
SLD3P53135 YKL036CYKL036C 393 nt15.69■□□□□ 0.1
SLD3P53135 SRX1YKL086W 384 nt15.34■□□□□ 0.05
SLD3P53135 Q0297Q0297 156 nt15.19■□□□□ 0.02
SLD3P53135 DBP2YNL112W 1641 nt14.9□□□□□ -0.02
SLD3P53135 YBR190WYBR190W 312 nt14.72□□□□□ -0.05
SLD3P53135 YCR051WYCR051W 669 nt14.53□□□□□ -0.08
SLD3P53135 RTC3YHR087W 336 nt14.38□□□□□ -0.11
SLD3P53135 SSA3YBL075C 1950 nt14.23□□□□□ -0.13
SLD3P53135 TRN1tP(UGG)A 72 nt14.2□□□□□ -0.14
SLD3P53135 SUF9tP(UGG)F 72 nt14.2□□□□□ -0.14
SLD3P53135 SUF8tP(UGG)H 72 nt14.2□□□□□ -0.14
SLD3P53135 tP(UGG)LtP(UGG)L 72 nt14.2□□□□□ -0.14
SLD3P53135 SUF7tP(UGG)M 72 nt14.2□□□□□ -0.14
SLD3P53135 tP(UGG)N1tP(UGG)N1 72 nt14.2□□□□□ -0.14
SLD3P53135 tP(UGG)N2tP(UGG)N2 72 nt14.2□□□□□ -0.14
SLD3P53135 tP(UGG)O1tP(UGG)O1 72 nt14.2□□□□□ -0.14
SLD3P53135 SUF11tP(UGG)O2 72 nt14.2□□□□□ -0.14
SLD3P53135 CCC1YLR220W 969 nt14.07□□□□□ -0.16
SLD3P53135 SCS3YGL126W 1143 nt13.99□□□□□ -0.17
SLD3P53135 RVS167YDR388W 1449 nt13.9□□□□□ -0.19
SLD3P53135 PUT4YOR348C 1884 nt13.79□□□□□ -0.2
SLD3P53135 SCJ1YMR214W 1134 nt13.69□□□□□ -0.22
SLD3P53135 RPP1BYDL130W 321 nt13.63□□□□□ -0.23
SLD3P53135 Q0182Q0182 405 nt13.63□□□□□ -0.23
SLD3P53135 YOL085CYOL085C 342 nt13.61□□□□□ -0.23
SLD3P53135 PKP1YIL042C 1185 nt13.48□□□□□ -0.25
SLD3P53135 ARE1YCR048W 1833 nt13.37□□□□□ -0.27
SLD3P53135 POA1YBR022W 534 nt13.33□□□□□ -0.28
SLD3P53135 SHR5YOL110W 714 nt13.27□□□□□ -0.29
SLD3P53135 tP(UGG)O3tP(UGG)O3 72 nt13.26□□□□□ -0.29
SLD3P53135 URN1YPR152C 1398 nt13.25□□□□□ -0.29
SLD3P53135 SAH1YER043C 1350 nt13.22□□□□□ -0.29
SLD3P53135 YHR049C-AYHR049C-A 297 nt13.21□□□□□ -0.29
SLD3P53135 OPI9YLR338W 858 nt13.16□□□□□ -0.3
SLD3P53135 BSC6YOL137W 1494 nt13.13□□□□□ -0.31
SLD3P53135 PET122YER153C 765 nt13.09□□□□□ -0.31
SLD3P53135 DEP1YAL013W 1218 nt13.09□□□□□ -0.31
SLD3P53135 MOT3YMR070W 1473 nt13.06□□□□□ -0.32
SLD3P53135 SPT5YML010W 3192 nt12.92□□□□□ -0.34
SLD3P53135 RPN10YHR200W 807 nt12.92□□□□□ -0.34
SLD3P53135 BUD23YCR047C 828 nt12.87□□□□□ -0.35
SLD3P53135 YDJ1YNL064C 1230 nt12.82□□□□□ -0.36
SLD3P53135 YNL208WYNL208W 600 nt12.82□□□□□ -0.36
SLD3P53135 SCR1SCR1 522 nt12.81□□□□□ -0.36
SLD3P53135 PUN1YLR414C 792 nt12.78□□□□□ -0.36
SLD3P53135 SSA4YER103W 1929 nt12.74□□□□□ -0.37
SLD3P53135 PTC2YER089C 1395 nt12.73□□□□□ -0.37
SLD3P53135 RRN5YLR141W 1092 nt12.66□□□□□ -0.38
SLD3P53135 GAR1YHR089C 618 nt12.64□□□□□ -0.39
SLD3P53135 NAB2YGL122C 1578 nt12.64□□□□□ -0.39
SLD3P53135 YJR018WYJR018W 363 nt12.6□□□□□ -0.39
SLD3P53135 YER088W-BYER088W-B 147 nt12.4□□□□□ -0.42
SLD3P53135 FIS1YIL065C 468 nt12.39□□□□□ -0.43
SLD3P53135 MEP2YNL142W 1500 nt12.38□□□□□ -0.43
SLD3P53135 DAL1YIR027C 1383 nt12.36□□□□□ -0.43
SLD3P53135 ATS1YAL020C 1002 nt12.36□□□□□ -0.43
SLD3P53135 FPR4YLR449W 1179 nt12.34□□□□□ -0.43
SLD3P53135 BDF1YLR399C 2061 nt12.3□□□□□ -0.44
SLD3P53135 YJR120WYJR120W 351 nt12.27□□□□□ -0.45
SLD3P53135 TIR1YER011W 765 nt12.24□□□□□ -0.45
SLD3P53135 PHO4YFR034C 939 nt12.24□□□□□ -0.45
SLD3P53135 RSB1YOR049C 1065 nt12.24□□□□□ -0.45
SLD3P53135 INM2YDR287W 879 nt12.22□□□□□ -0.45
SLD3P53135 RPP2BYDR382W 333 nt12.21□□□□□ -0.45
SLD3P53135 YPS1YLR120C 1710 nt12.2□□□□□ -0.46
SLD3P53135 SSA1YAL005C 1929 nt12.2□□□□□ -0.46
SLD3P53135 DCW1YKL046C 1350 nt12.18□□□□□ -0.46
SLD3P53135 TAT1YBR069C 1860 nt12.12□□□□□ -0.47
SLD3P53135 YHR165W-AYHR165W-A 312 nt12.11□□□□□ -0.47
SLD3P53135 YDR095CYDR095C 411 nt12.03□□□□□ -0.48
SLD3P53135 YBL100CYBL100C 315 nt12.02□□□□□ -0.49
SLD3P53135 EMI2YDR516C 1503 nt12.01□□□□□ -0.49
SLD3P53135 YMR090WYMR090W 684 nt11.98□□□□□ -0.49
SLD3P53135 YBR220CYBR220C 1683 nt11.97□□□□□ -0.49
SLD3P53135 SRB2YHR041C 633 nt11.88□□□□□ -0.51
SLD3P53135 YDL221WYDL221W 552 nt11.86□□□□□ -0.51
SLD3P53135 BDH2YAL061W 1254 nt11.86□□□□□ -0.51
SLD3P53135 FUN26YAL022C 1554 nt11.86□□□□□ -0.51
SLD3P53135 SDH1YKL148C 1923 nt11.83□□□□□ -0.52
SLD3P53135 CAC2YML102W 1407 nt11.83□□□□□ -0.52
SLD3P53135 PTP1YDL230W 1008 nt11.81□□□□□ -0.52
SLD3P53135 ALF1YNL148C 765 nt11.81□□□□□ -0.52
SLD3P53135 RPP2AYOL039W 321 nt11.81□□□□□ -0.52
SLD3P53135 TRM9YML014W 840 nt11.75□□□□□ -0.53
SLD3P53135 PAC11YDR488C 1602 nt11.71□□□□□ -0.54
SLD3P53135 SCC4YER147C 1875 nt11.68□□□□□ -0.54
SLD3P53135 IRC15YPL017C 1500 nt11.65□□□□□ -0.55
SLD3P53135 PCH2YBR186W 1695 nt11.65□□□□□ -0.55
SLD3P53135 CCT6YDR188W 1641 nt11.64□□□□□ -0.55
SLD3P53135 SIS1YNL007C 1059 nt11.63□□□□□ -0.55
SLD3P53135 SEC11YIR022W 504 nt11.61□□□□□ -0.55
SLD3P53135 WWM1YFL010C 636 nt11.6□□□□□ -0.55
SLD3P53135 LSM3YLR438C-A 270 nt11.6□□□□□ -0.55
SLD3P53135 GUT2YIL155C 1950 nt11.59□□□□□ -0.55
SLD3P53135 SUF2tP(AGG)C 72 nt11.59□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms