Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 YML009W-BYML009W-B 477 nt20.57■□□□□ 0.88
NHX1Q04121 NSR1YGR159C 1245 nt20.53■□□□□ 0.88
NHX1Q04121 NOP1YDL014W 984 nt19.93■□□□□ 0.78
NHX1Q04121 MDJ1YFL016C 1536 nt18.37■□□□□ 0.53
NHX1Q04121 YKL036CYKL036C 393 nt18.28■□□□□ 0.52
NHX1Q04121 SRX1YKL086W 384 nt17.42■□□□□ 0.38
NHX1Q04121 Q0297Q0297 156 nt17.41■□□□□ 0.38
NHX1Q04121 YJL027CYJL027C 417 nt17.06■□□□□ 0.32
NHX1Q04121 SCS3YGL126W 1143 nt16.59■□□□□ 0.25
NHX1Q04121 YCR051WYCR051W 669 nt16.52■□□□□ 0.24
NHX1Q04121 DBP2YNL112W 1641 nt16.19■□□□□ 0.18
NHX1Q04121 YOL085CYOL085C 342 nt15.85■□□□□ 0.13
NHX1Q04121 TRN1tP(UGG)A 72 nt15.83■□□□□ 0.12
NHX1Q04121 SUF9tP(UGG)F 72 nt15.83■□□□□ 0.12
NHX1Q04121 SUF8tP(UGG)H 72 nt15.83■□□□□ 0.12
NHX1Q04121 tP(UGG)LtP(UGG)L 72 nt15.83■□□□□ 0.12
NHX1Q04121 SUF7tP(UGG)M 72 nt15.83■□□□□ 0.12
NHX1Q04121 tP(UGG)N1tP(UGG)N1 72 nt15.83■□□□□ 0.12
NHX1Q04121 tP(UGG)N2tP(UGG)N2 72 nt15.83■□□□□ 0.12
NHX1Q04121 tP(UGG)O1tP(UGG)O1 72 nt15.83■□□□□ 0.12
NHX1Q04121 SUF11tP(UGG)O2 72 nt15.83■□□□□ 0.12
NHX1Q04121 CCC1YLR220W 969 nt15.67■□□□□ 0.1
NHX1Q04121 YBR190WYBR190W 312 nt15.67■□□□□ 0.1
NHX1Q04121 RPP1BYDL130W 321 nt15.63■□□□□ 0.09
NHX1Q04121 PKP1YIL042C 1185 nt15.63■□□□□ 0.09
NHX1Q04121 RTC3YHR087W 336 nt15.33■□□□□ 0.04
NHX1Q04121 RVS167YDR388W 1449 nt15.19■□□□□ 0.02
NHX1Q04121 SCJ1YMR214W 1134 nt15.12■□□□□ 0.01
NHX1Q04121 PET122YER153C 765 nt14.95□□□□□ -0.02
NHX1Q04121 tP(UGG)O3tP(UGG)O3 72 nt14.93□□□□□ -0.02
NHX1Q04121 ATS1YAL020C 1002 nt14.79□□□□□ -0.04
NHX1Q04121 SCR1SCR1 522 nt14.75□□□□□ -0.05
NHX1Q04121 SHR5YOL110W 714 nt14.64□□□□□ -0.07
NHX1Q04121 RRN5YLR141W 1092 nt14.51□□□□□ -0.09
NHX1Q04121 YDJ1YNL064C 1230 nt14.44□□□□□ -0.1
NHX1Q04121 PUT4YOR348C 1884 nt14.33□□□□□ -0.12
NHX1Q04121 URN1YPR152C 1398 nt14.31□□□□□ -0.12
NHX1Q04121 DEP1YAL013W 1218 nt14.27□□□□□ -0.13
NHX1Q04121 YER088W-BYER088W-B 147 nt14.22□□□□□ -0.13
NHX1Q04121 RSB1YOR049C 1065 nt14.18□□□□□ -0.14
NHX1Q04121 GAR1YHR089C 618 nt14.15□□□□□ -0.14
NHX1Q04121 OPI9YLR338W 858 nt14.12□□□□□ -0.15
NHX1Q04121 SAH1YER043C 1350 nt14.07□□□□□ -0.16
NHX1Q04121 RPN10YHR200W 807 nt14.06□□□□□ -0.16
NHX1Q04121 ARE1YCR048W 1833 nt14.04□□□□□ -0.16
NHX1Q04121 YNL208WYNL208W 600 nt14.03□□□□□ -0.16
NHX1Q04121 YHR049C-AYHR049C-A 297 nt13.87□□□□□ -0.19
NHX1Q04121 POA1YBR022W 534 nt13.87□□□□□ -0.19
NHX1Q04121 PST2YDR032C 597 nt13.72□□□□□ -0.21
NHX1Q04121 PUN1YLR414C 792 nt13.71□□□□□ -0.21
NHX1Q04121 SSA3YBL075C 1950 nt13.69□□□□□ -0.22
NHX1Q04121 TIR1YER011W 765 nt13.68□□□□□ -0.22
NHX1Q04121 YJR018WYJR018W 363 nt13.64□□□□□ -0.23
NHX1Q04121 BSC6YOL137W 1494 nt13.6□□□□□ -0.23
NHX1Q04121 PTC2YER089C 1395 nt13.57□□□□□ -0.24
NHX1Q04121 SSA1YAL005C 1929 nt13.54□□□□□ -0.24
NHX1Q04121 BUD23YCR047C 828 nt13.54□□□□□ -0.24
NHX1Q04121 Q0182Q0182 405 nt13.44□□□□□ -0.26
NHX1Q04121 YJR120WYJR120W 351 nt13.42□□□□□ -0.26
NHX1Q04121 NAB2YGL122C 1578 nt13.39□□□□□ -0.27
NHX1Q04121 RPP2BYDR382W 333 nt13.32□□□□□ -0.28
NHX1Q04121 SRB2YHR041C 633 nt13.31□□□□□ -0.28
NHX1Q04121 FIS1YIL065C 468 nt13.22□□□□□ -0.29
NHX1Q04121 DAL1YIR027C 1383 nt13.21□□□□□ -0.29
NHX1Q04121 SHU1YHL006C 453 nt13.2□□□□□ -0.3
NHX1Q04121 FPR4YLR449W 1179 nt13.18□□□□□ -0.3
NHX1Q04121 INM2YDR287W 879 nt13.16□□□□□ -0.3
NHX1Q04121 YKL097CYKL097C 411 nt13.12□□□□□ -0.31
NHX1Q04121 PHO4YFR034C 939 nt13.09□□□□□ -0.31
NHX1Q04121 WWM1YFL010C 636 nt13.06□□□□□ -0.32
NHX1Q04121 YAL037C-BYAL037C-B 975 nt13.04□□□□□ -0.32
NHX1Q04121 BDH2YAL061W 1254 nt13.04□□□□□ -0.32
NHX1Q04121 YBL100CYBL100C 315 nt13.03□□□□□ -0.32
NHX1Q04121 SPT5YML010W 3192 nt13.02□□□□□ -0.33
NHX1Q04121 MOT3YMR070W 1473 nt13□□□□□ -0.33
NHX1Q04121 YGR021WYGR021W 873 nt12.94□□□□□ -0.34
NHX1Q04121 HOM6YJR139C 1080 nt12.9□□□□□ -0.34
NHX1Q04121 YPS1YLR120C 1710 nt12.87□□□□□ -0.35
NHX1Q04121 FUN26YAL022C 1554 nt12.86□□□□□ -0.35
NHX1Q04121 YFL021C-AYFL021C-A 855 nt12.85□□□□□ -0.35
NHX1Q04121 LSM3YLR438C-A 270 nt12.84□□□□□ -0.35
NHX1Q04121 MNP1YGL068W 585 nt12.83□□□□□ -0.36
NHX1Q04121 TRM9YML014W 840 nt12.81□□□□□ -0.36
NHX1Q04121 YDR095CYDR095C 411 nt12.78□□□□□ -0.36
NHX1Q04121 MEP2YNL142W 1500 nt12.78□□□□□ -0.36
NHX1Q04121 YHR165W-AYHR165W-A 312 nt12.74□□□□□ -0.37
NHX1Q04121 RKM5YLR137W 1104 nt12.71□□□□□ -0.37
NHX1Q04121 ALF1YNL148C 765 nt12.71□□□□□ -0.37
NHX1Q04121 CCT6YDR188W 1641 nt12.7□□□□□ -0.38
NHX1Q04121 YOR139CYOR139C 393 nt12.62□□□□□ -0.39
NHX1Q04121 SSA4YER103W 1929 nt12.6□□□□□ -0.39
NHX1Q04121 SUF2tP(AGG)C 72 nt12.59□□□□□ -0.39
NHX1Q04121 SUF10tP(AGG)N 72 nt12.59□□□□□ -0.39
NHX1Q04121 DCW1YKL046C 1350 nt12.58□□□□□ -0.4
NHX1Q04121 YOL037CYOL037C 354 nt12.56□□□□□ -0.4
NHX1Q04121 NPL3YDR432W 1245 nt12.53□□□□□ -0.4
NHX1Q04121 RPP2AYOL039W 321 nt12.53□□□□□ -0.4
NHX1Q04121 SIS1YNL007C 1059 nt12.51□□□□□ -0.41
NHX1Q04121 PTP1YDL230W 1008 nt12.5□□□□□ -0.41
NHX1Q04121 EMI2YDR516C 1503 nt12.42□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms