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Protein–RNA interactions for Protein: P53378
TUB4, Tubulin gamma chain, yeast
Predictions only
Length
473 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
TUB4
P53378
YML009W-B
YML009W-B
477 nt
21.16
■□□□□ 0.98
TUB4
P53378
NOP1
YDL014W
984 nt
20.72
■□□□□ 0.91
TUB4
P53378
NSR1
YGR159C
1245 nt
20.63
■□□□□ 0.89
TUB4
P53378
YKL036C
YKL036C
393 nt
19.44
■□□□□ 0.7
TUB4
P53378
YJL027C
YJL027C
417 nt
18.25
■□□□□ 0.51
TUB4
P53378
Q0297
Q0297
156 nt
18.19
■□□□□ 0.5
TUB4
P53378
SRX1
YKL086W
384 nt
18.06
■□□□□ 0.48
TUB4
P53378
MDJ1
YFL016C
1536 nt
17.98
■□□□□ 0.47
TUB4
P53378
SCS3
YGL126W
1143 nt
17.87
■□□□□ 0.45
TUB4
P53378
YCR051W
YCR051W
669 nt
17.23
■□□□□ 0.35
TUB4
P53378
YOL085C
YOL085C
342 nt
16.79
■□□□□ 0.28
TUB4
P53378
PKP1
YIL042C
1185 nt
16.53
■□□□□ 0.24
TUB4
P53378
RPP1B
YDL130W
321 nt
16.35
■□□□□ 0.21
TUB4
P53378
SCJ1
YMR214W
1134 nt
16.28
■□□□□ 0.2
TUB4
P53378
TRN1
tP(UGG)A
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
SUF9
tP(UGG)F
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
SUF8
tP(UGG)H
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
tP(UGG)L
tP(UGG)L
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
SUF7
tP(UGG)M
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
tP(UGG)N1
tP(UGG)N1
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
tP(UGG)N2
tP(UGG)N2
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
tP(UGG)O1
tP(UGG)O1
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
SUF11
tP(UGG)O2
72 nt
16.09
■□□□□ 0.17
TUB4
P53378
ATS1
YAL020C
1002 nt
16.07
■□□□□ 0.16
TUB4
P53378
CCC1
YLR220W
969 nt
16
■□□□□ 0.15
TUB4
P53378
DBP2
YNL112W
1641 nt
15.98
■□□□□ 0.15
TUB4
P53378
SCR1
SCR1
522 nt
15.58
■□□□□ 0.08
TUB4
P53378
PET122
YER153C
765 nt
15.57
■□□□□ 0.08
TUB4
P53378
tP(UGG)O3
tP(UGG)O3
72 nt
15.36
■□□□□ 0.05
TUB4
P53378
RVS167
YDR388W
1449 nt
15.26
■□□□□ 0.03
TUB4
P53378
YBR190W
YBR190W
312 nt
15.22
■□□□□ 0.03
TUB4
P53378
RRN5
YLR141W
1092 nt
15.15
■□□□□ 0.02
TUB4
P53378
RSB1
YOR049C
1065 nt
15.01
□□□□□ -0.01
TUB4
P53378
RTC3
YHR087W
336 nt
14.99
□□□□□ -0.01
TUB4
P53378
Q0182
Q0182
405 nt
14.91
□□□□□ -0.02
TUB4
P53378
MOT3
YMR070W
1473 nt
14.85
□□□□□ -0.03
TUB4
P53378
YER088W-B
YER088W-B
147 nt
14.85
□□□□□ -0.03
TUB4
P53378
YDJ1
YNL064C
1230 nt
14.84
□□□□□ -0.03
TUB4
P53378
PST2
YDR032C
597 nt
14.79
□□□□□ -0.04
TUB4
P53378
SHR5
YOL110W
714 nt
14.76
□□□□□ -0.05
TUB4
P53378
GAR1
YHR089C
618 nt
14.5
□□□□□ -0.09
TUB4
P53378
YGR139W
YGR139W
339 nt
14.48
□□□□□ -0.09
TUB4
P53378
YKL097C
YKL097C
411 nt
14.48
□□□□□ -0.09
TUB4
P53378
DEP1
YAL013W
1218 nt
14.24
□□□□□ -0.13
TUB4
P53378
URN1
YPR152C
1398 nt
14.12
□□□□□ -0.15
TUB4
P53378
SHU1
YHL006C
453 nt
14.12
□□□□□ -0.15
TUB4
P53378
RPN10
YHR200W
807 nt
14.06
□□□□□ -0.16
TUB4
P53378
YNL208W
YNL208W
600 nt
14.04
□□□□□ -0.16
TUB4
P53378
TIR1
YER011W
765 nt
13.98
□□□□□ -0.17
TUB4
P53378
YAL037C-B
YAL037C-B
975 nt
13.81
□□□□□ -0.2
TUB4
P53378
OPI9
YLR338W
858 nt
13.81
□□□□□ -0.2
TUB4
P53378
NME1
NME1
340 nt
13.77
□□□□□ -0.21
TUB4
P53378
YOR139C
YOR139C
393 nt
13.75
□□□□□ -0.21
TUB4
P53378
SSA1
YAL005C
1929 nt
13.7
□□□□□ -0.22
TUB4
P53378
NPL3
YDR432W
1245 nt
13.66
□□□□□ -0.22
TUB4
P53378
SAH1
YER043C
1350 nt
13.63
□□□□□ -0.23
TUB4
P53378
YJR018W
YJR018W
363 nt
13.5
□□□□□ -0.25
TUB4
P53378
YGR021W
YGR021W
873 nt
13.49
□□□□□ -0.25
TUB4
P53378
PUT4
YOR348C
1884 nt
13.48
□□□□□ -0.25
TUB4
P53378
SRB2
YHR041C
633 nt
13.48
□□□□□ -0.25
TUB4
P53378
PUN1
YLR414C
792 nt
13.45
□□□□□ -0.26
TUB4
P53378
MNP1
YGL068W
585 nt
13.43
□□□□□ -0.26
TUB4
P53378
WWM1
YFL010C
636 nt
13.41
□□□□□ -0.26
TUB4
P53378
HOM6
YJR139C
1080 nt
13.41
□□□□□ -0.26
TUB4
P53378
RPP2B
YDR382W
333 nt
13.38
□□□□□ -0.27
TUB4
P53378
YOL037C
YOL037C
354 nt
13.37
□□□□□ -0.27
TUB4
P53378
ARE1
YCR048W
1833 nt
13.36
□□□□□ -0.27
TUB4
P53378
YJR120W
YJR120W
351 nt
13.27
□□□□□ -0.29
TUB4
P53378
YHR049C-A
YHR049C-A
297 nt
13.26
□□□□□ -0.29
TUB4
P53378
RKM5
YLR137W
1104 nt
13.23
□□□□□ -0.29
TUB4
P53378
YFL021C-A
YFL021C-A
855 nt
13.21
□□□□□ -0.29
TUB4
P53378
PTC2
YER089C
1395 nt
13.2
□□□□□ -0.3
TUB4
P53378
tM(CAU)C
tM(CAU)C
72 nt
13.19
□□□□□ -0.3
TUB4
P53378
IMT4
tM(CAU)E
72 nt
13.19
□□□□□ -0.3
TUB4
P53378
IMT3
tM(CAU)J3
72 nt
13.19
□□□□□ -0.3
TUB4
P53378
IMT1
tM(CAU)O1
72 nt
13.19
□□□□□ -0.3
TUB4
P53378
IMT2
tM(CAU)P
72 nt
13.19
□□□□□ -0.3
TUB4
P53378
CSM2
YIL132C
642 nt
13.15
□□□□□ -0.3
TUB4
P53378
POA1
YBR022W
534 nt
13.13
□□□□□ -0.31
TUB4
P53378
BDH2
YAL061W
1254 nt
13.12
□□□□□ -0.31
TUB4
P53378
PUS2
YGL063W
1113 nt
13.03
□□□□□ -0.32
TUB4
P53378
BUD23
YCR047C
828 nt
13.02
□□□□□ -0.33
TUB4
P53378
LSM3
YLR438C-A
270 nt
13.01
□□□□□ -0.33
TUB4
P53378
NAB2
YGL122C
1578 nt
12.98
□□□□□ -0.33
TUB4
P53378
YLR281C
YLR281C
468 nt
12.98
□□□□□ -0.33
TUB4
P53378
SSA3
YBL075C
1950 nt
12.97
□□□□□ -0.33
TUB4
P53378
INM2
YDR287W
879 nt
12.96
□□□□□ -0.33
TUB4
P53378
FPR4
YLR449W
1179 nt
12.93
□□□□□ -0.34
TUB4
P53378
YBL100C
YBL100C
315 nt
12.92
□□□□□ -0.34
TUB4
P53378
WHI5
YOR083W
888 nt
12.91
□□□□□ -0.34
TUB4
P53378
PAU21
YOR394W
495 nt
12.9
□□□□□ -0.34
TUB4
P53378
PAU22
YPL282C
495 nt
12.9
□□□□□ -0.34
TUB4
P53378
DAL1
YIR027C
1383 nt
12.9
□□□□□ -0.34
TUB4
P53378
TRM9
YML014W
840 nt
12.84
□□□□□ -0.35
TUB4
P53378
FIS1
YIL065C
468 nt
12.8
□□□□□ -0.36
TUB4
P53378
BSC6
YOL137W
1494 nt
12.77
□□□□□ -0.37
TUB4
P53378
PHO4
YFR034C
939 nt
12.76
□□□□□ -0.37
TUB4
P53378
ARO7
YPR060C
771 nt
12.76
□□□□□ -0.37
TUB4
P53378
FUN26
YAL022C
1554 nt
12.76
□□□□□ -0.37
TUB4
P53378
FMP45
YDL222C
930 nt
12.71
□□□□□ -0.37
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Retrieved 100 of 7,029 protein–RNA pairs in 12 ms