Protein–RNA interactions for Protein: P0CS90

SSC1, Heat shock protein SSC1, mitochondrial, yeastyeast

Known RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSC1P0CS90 NSR1YGR159C 1245 nt20.55■□□□□ 0.88
SSC1P0CS90 YML009W-BYML009W-B 477 nt20.41■□□□□ 0.86
SSC1P0CS90 NOP1YDL014W 984 nt19.67■□□□□ 0.74
SSC1P0CS90 MDJ1YFL016C 1536 nt18.59■□□□□ 0.57
SSC1P0CS90 YKL036CYKL036C 393 nt17.87■□□□□ 0.45
SSC1P0CS90 SRX1YKL086W 384 nt17.22■□□□□ 0.35
SSC1P0CS90 Q0297Q0297 156 nt17.14■□□□□ 0.33
SSC1P0CS90 YJL027CYJL027C 417 nt17.1■□□□□ 0.33
SSC1P0CS90 DBP2YNL112W 1641 nt16.34■□□□□ 0.21
SSC1P0CS90 YCR051WYCR051W 669 nt16.29■□□□□ 0.2
SSC1P0CS90 SCS3YGL126W 1143 nt16.12■□□□□ 0.17
SSC1P0CS90 YBR190WYBR190W 312 nt15.92■□□□□ 0.14
SSC1P0CS90 TRN1tP(UGG)A 72 nt15.78■□□□□ 0.12
SSC1P0CS90 SUF9tP(UGG)F 72 nt15.78■□□□□ 0.12
SSC1P0CS90 SUF8tP(UGG)H 72 nt15.78■□□□□ 0.12
SSC1P0CS90 tP(UGG)LtP(UGG)L 72 nt15.78■□□□□ 0.12
SSC1P0CS90 SUF7tP(UGG)M 72 nt15.78■□□□□ 0.12
SSC1P0CS90 tP(UGG)N1tP(UGG)N1 72 nt15.78■□□□□ 0.12
SSC1P0CS90 tP(UGG)N2tP(UGG)N2 72 nt15.78■□□□□ 0.12
SSC1P0CS90 tP(UGG)O1tP(UGG)O1 72 nt15.78■□□□□ 0.12
SSC1P0CS90 SUF11tP(UGG)O2 72 nt15.78■□□□□ 0.12
SSC1P0CS90 CCC1YLR220W 969 nt15.59■□□□□ 0.09
SSC1P0CS90 RTC3YHR087W 336 nt15.52■□□□□ 0.08
SSC1P0CS90 YOL085CYOL085C 342 nt15.5■□□□□ 0.07
SSC1P0CS90 RPP1BYDL130W 321 nt15.38■□□□□ 0.05
SSC1P0CS90 PKP1YIL042C 1185 nt15.31■□□□□ 0.04
SSC1P0CS90 RVS167YDR388W 1449 nt15.22■□□□□ 0.03
SSC1P0CS90 SCJ1YMR214W 1134 nt15.15■□□□□ 0.02
SSC1P0CS90 SSA3YBL075C 1950 nt14.98□□□□□ -0.01
SSC1P0CS90 tP(UGG)O3tP(UGG)O3 72 nt14.81□□□□□ -0.04
SSC1P0CS90 PET122YER153C 765 nt14.76□□□□□ -0.05
SSC1P0CS90 PUT4YOR348C 1884 nt14.74□□□□□ -0.05
SSC1P0CS90 SHR5YOL110W 714 nt14.64□□□□□ -0.07
SSC1P0CS90 SCR1SCR1 522 nt14.46□□□□□ -0.09
SSC1P0CS90 URN1YPR152C 1398 nt14.44□□□□□ -0.1
SSC1P0CS90 ARE1YCR048W 1833 nt14.37□□□□□ -0.11
SSC1P0CS90 DEP1YAL013W 1218 nt14.34□□□□□ -0.11
SSC1P0CS90 YDJ1YNL064C 1230 nt14.32□□□□□ -0.12
SSC1P0CS90 ATS1YAL020C 1002 nt14.31□□□□□ -0.12
SSC1P0CS90 OPI9YLR338W 858 nt14.3□□□□□ -0.12
SSC1P0CS90 SAH1YER043C 1350 nt14.29□□□□□ -0.12
SSC1P0CS90 RRN5YLR141W 1092 nt14.27□□□□□ -0.13
SSC1P0CS90 POA1YBR022W 534 nt14.22□□□□□ -0.13
SSC1P0CS90 YHR049C-AYHR049C-A 297 nt14.18□□□□□ -0.14
SSC1P0CS90 RPN10YHR200W 807 nt14.11□□□□□ -0.15
SSC1P0CS90 YNL208WYNL208W 600 nt14.07□□□□□ -0.16
SSC1P0CS90 GAR1YHR089C 618 nt14.05□□□□□ -0.16
SSC1P0CS90 YER088W-BYER088W-B 147 nt14□□□□□ -0.17
SSC1P0CS90 BSC6YOL137W 1494 nt13.99□□□□□ -0.17
SSC1P0CS90 RSB1YOR049C 1065 nt13.87□□□□□ -0.19
SSC1P0CS90 PUN1YLR414C 792 nt13.86□□□□□ -0.19
SSC1P0CS90 BUD23YCR047C 828 nt13.8□□□□□ -0.2
SSC1P0CS90 PTC2YER089C 1395 nt13.76□□□□□ -0.21
SSC1P0CS90 YJR018WYJR018W 363 nt13.74□□□□□ -0.21
SSC1P0CS90 SPT5YML010W 3192 nt13.62□□□□□ -0.23
SSC1P0CS90 NAB2YGL122C 1578 nt13.62□□□□□ -0.23
SSC1P0CS90 TIR1YER011W 765 nt13.6□□□□□ -0.23
SSC1P0CS90 YJR120WYJR120W 351 nt13.53□□□□□ -0.24
SSC1P0CS90 SSA1YAL005C 1929 nt13.52□□□□□ -0.24
SSC1P0CS90 FIS1YIL065C 468 nt13.44□□□□□ -0.26
SSC1P0CS90 DAL1YIR027C 1383 nt13.38□□□□□ -0.27
SSC1P0CS90 RPP2BYDR382W 333 nt13.35□□□□□ -0.27
SSC1P0CS90 FPR4YLR449W 1179 nt13.33□□□□□ -0.28
SSC1P0CS90 PST2YDR032C 597 nt13.31□□□□□ -0.28
SSC1P0CS90 PHO4YFR034C 939 nt13.28□□□□□ -0.28
SSC1P0CS90 SRB2YHR041C 633 nt13.28□□□□□ -0.28
SSC1P0CS90 INM2YDR287W 879 nt13.27□□□□□ -0.29
SSC1P0CS90 SSA4YER103W 1929 nt13.25□□□□□ -0.29
SSC1P0CS90 MEP2YNL142W 1500 nt13.17□□□□□ -0.3
SSC1P0CS90 YPS1YLR120C 1710 nt13.13□□□□□ -0.31
SSC1P0CS90 YBL100CYBL100C 315 nt13.13□□□□□ -0.31
SSC1P0CS90 BDH2YAL061W 1254 nt13.06□□□□□ -0.32
SSC1P0CS90 YDR095CYDR095C 411 nt13□□□□□ -0.33
SSC1P0CS90 YHR165W-AYHR165W-A 312 nt12.98□□□□□ -0.33
SSC1P0CS90 DCW1YKL046C 1350 nt12.97□□□□□ -0.33
SSC1P0CS90 FUN26YAL022C 1554 nt12.96□□□□□ -0.33
SSC1P0CS90 WWM1YFL010C 636 nt12.96□□□□□ -0.33
SSC1P0CS90 SHU1YHL006C 453 nt12.86□□□□□ -0.35
SSC1P0CS90 TRM9YML014W 840 nt12.84□□□□□ -0.35
SSC1P0CS90 LSM3YLR438C-A 270 nt12.81□□□□□ -0.36
SSC1P0CS90 ALF1YNL148C 765 nt12.81□□□□□ -0.36
SSC1P0CS90 EMI2YDR516C 1503 nt12.78□□□□□ -0.36
SSC1P0CS90 BDF1YLR399C 2061 nt12.78□□□□□ -0.36
SSC1P0CS90 CCT6YDR188W 1641 nt12.77□□□□□ -0.37
SSC1P0CS90 PTP1YDL230W 1008 nt12.76□□□□□ -0.37
SSC1P0CS90 YGR021WYGR021W 873 nt12.76□□□□□ -0.37
SSC1P0CS90 YAL037C-BYAL037C-B 975 nt12.76□□□□□ -0.37
SSC1P0CS90 RPP2AYOL039W 321 nt12.75□□□□□ -0.37
SSC1P0CS90 YFL021C-AYFL021C-A 855 nt12.74□□□□□ -0.37
SSC1P0CS90 HOM6YJR139C 1080 nt12.73□□□□□ -0.37
SSC1P0CS90 CAC2YML102W 1407 nt12.71□□□□□ -0.37
SSC1P0CS90 PAC11YDR488C 1602 nt12.7□□□□□ -0.38
SSC1P0CS90 YMR090WYMR090W 684 nt12.67□□□□□ -0.38
SSC1P0CS90 YDL221WYDL221W 552 nt12.66□□□□□ -0.38
SSC1P0CS90 SIS1YNL007C 1059 nt12.66□□□□□ -0.38
SSC1P0CS90 YBR220CYBR220C 1683 nt12.66□□□□□ -0.38
SSC1P0CS90 SUF2tP(AGG)C 72 nt12.65□□□□□ -0.38
SSC1P0CS90 SUF10tP(AGG)N 72 nt12.65□□□□□ -0.38
SSC1P0CS90 MNP1YGL068W 585 nt12.63□□□□□ -0.39
SSC1P0CS90 TAT1YBR069C 1860 nt12.61□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 58.6 ms