Protein–RNA interactions for Protein: P28737

MSP1, Protein MSP1, yeastyeast

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSP1P28737 NSR1YGR159C 1245 nt23.12■■□□□ 1.29
MSP1P28737 YML009W-BYML009W-B 477 nt22.79■■□□□ 1.24
MSP1P28737 NOP1YDL014W 984 nt21.82■■□□□ 1.08
MSP1P28737 MDJ1YFL016C 1536 nt21.23■□□□□ 0.99
MSP1P28737 YKL036CYKL036C 393 nt19.6■□□□□ 0.73
MSP1P28737 YJL027CYJL027C 417 nt19.45■□□□□ 0.7
MSP1P28737 SRX1YKL086W 384 nt19.09■□□□□ 0.65
MSP1P28737 Q0297Q0297 156 nt18.93■□□□□ 0.62
MSP1P28737 DBP2YNL112W 1641 nt18.52■□□□□ 0.56
MSP1P28737 YBR190WYBR190W 312 nt18.17■□□□□ 0.5
MSP1P28737 YCR051WYCR051W 669 nt18.11■□□□□ 0.49
MSP1P28737 RTC3YHR087W 336 nt17.77■□□□□ 0.44
MSP1P28737 TRN1tP(UGG)A 72 nt17.66■□□□□ 0.42
MSP1P28737 SUF9tP(UGG)F 72 nt17.66■□□□□ 0.42
MSP1P28737 SUF8tP(UGG)H 72 nt17.66■□□□□ 0.42
MSP1P28737 tP(UGG)LtP(UGG)L 72 nt17.66■□□□□ 0.42
MSP1P28737 SUF7tP(UGG)M 72 nt17.66■□□□□ 0.42
MSP1P28737 tP(UGG)N1tP(UGG)N1 72 nt17.66■□□□□ 0.42
MSP1P28737 tP(UGG)N2tP(UGG)N2 72 nt17.66■□□□□ 0.42
MSP1P28737 tP(UGG)O1tP(UGG)O1 72 nt17.66■□□□□ 0.42
MSP1P28737 SUF11tP(UGG)O2 72 nt17.66■□□□□ 0.42
MSP1P28737 SCS3YGL126W 1143 nt17.56■□□□□ 0.4
MSP1P28737 CCC1YLR220W 969 nt17.52■□□□□ 0.4
MSP1P28737 SSA3YBL075C 1950 nt17.42■□□□□ 0.38
MSP1P28737 RVS167YDR388W 1449 nt17.16■□□□□ 0.34
MSP1P28737 SCJ1YMR214W 1134 nt17.08■□□□□ 0.32
MSP1P28737 YOL085CYOL085C 342 nt17.04■□□□□ 0.32
MSP1P28737 PUT4YOR348C 1884 nt17.03■□□□□ 0.32
MSP1P28737 RPP1BYDL130W 321 nt16.99■□□□□ 0.31
MSP1P28737 PKP1YIL042C 1185 nt16.91■□□□□ 0.3
MSP1P28737 ARE1YCR048W 1833 nt16.54■□□□□ 0.24
MSP1P28737 tP(UGG)O3tP(UGG)O3 72 nt16.51■□□□□ 0.23
MSP1P28737 POA1YBR022W 534 nt16.47■□□□□ 0.23
MSP1P28737 SHR5YOL110W 714 nt16.45■□□□□ 0.22
MSP1P28737 URN1YPR152C 1398 nt16.41■□□□□ 0.22
MSP1P28737 SAH1YER043C 1350 nt16.38■□□□□ 0.21
MSP1P28737 PET122YER153C 765 nt16.36■□□□□ 0.21
MSP1P28737 YHR049C-AYHR049C-A 297 nt16.33■□□□□ 0.2
MSP1P28737 DEP1YAL013W 1218 nt16.29■□□□□ 0.2
MSP1P28737 OPI9YLR338W 858 nt16.27■□□□□ 0.2
MSP1P28737 BSC6YOL137W 1494 nt16.22■□□□□ 0.19
MSP1P28737 SPT5YML010W 3192 nt15.93■□□□□ 0.14
MSP1P28737 RPN10YHR200W 807 nt15.93■□□□□ 0.14
MSP1P28737 SCR1SCR1 522 nt15.93■□□□□ 0.14
MSP1P28737 YDJ1YNL064C 1230 nt15.92■□□□□ 0.14
MSP1P28737 BUD23YCR047C 828 nt15.91■□□□□ 0.14
MSP1P28737 YNL208WYNL208W 600 nt15.87■□□□□ 0.13
MSP1P28737 RRN5YLR141W 1092 nt15.82■□□□□ 0.12
MSP1P28737 PUN1YLR414C 792 nt15.76■□□□□ 0.11
MSP1P28737 PTC2YER089C 1395 nt15.75■□□□□ 0.11
MSP1P28737 GAR1YHR089C 618 nt15.74■□□□□ 0.11
MSP1P28737 SSA4YER103W 1929 nt15.65■□□□□ 0.1
MSP1P28737 YJR018WYJR018W 363 nt15.6■□□□□ 0.09
MSP1P28737 NAB2YGL122C 1578 nt15.58■□□□□ 0.08
MSP1P28737 ATS1YAL020C 1002 nt15.52■□□□□ 0.08
MSP1P28737 YER088W-BYER088W-B 147 nt15.5■□□□□ 0.07
MSP1P28737 FIS1YIL065C 468 nt15.35■□□□□ 0.05
MSP1P28737 YJR120WYJR120W 351 nt15.31■□□□□ 0.04
MSP1P28737 RSB1YOR049C 1065 nt15.3■□□□□ 0.04
MSP1P28737 FPR4YLR449W 1179 nt15.27■□□□□ 0.04
MSP1P28737 DAL1YIR027C 1383 nt15.26■□□□□ 0.03
MSP1P28737 MEP2YNL142W 1500 nt15.26■□□□□ 0.03
MSP1P28737 TIR1YER011W 765 nt15.21■□□□□ 0.03
MSP1P28737 SSA1YAL005C 1929 nt15.21■□□□□ 0.02
MSP1P28737 PHO4YFR034C 939 nt15.15■□□□□ 0.02
MSP1P28737 BDF1YLR399C 2061 nt15.12■□□□□ 0.01
MSP1P28737 DCW1YKL046C 1350 nt15.08■□□□□ 0
MSP1P28737 INM2YDR287W 879 nt15.07■□□□□ 0
MSP1P28737 RPP2BYDR382W 333 nt15.07■□□□□ 0
MSP1P28737 YPS1YLR120C 1710 nt15.06■□□□□ 0
MSP1P28737 YHR165W-AYHR165W-A 312 nt14.94□□□□□ -0.02
MSP1P28737 SRB2YHR041C 633 nt14.92□□□□□ -0.02
MSP1P28737 YBL100CYBL100C 315 nt14.88□□□□□ -0.03
MSP1P28737 TAT1YBR069C 1860 nt14.88□□□□□ -0.03
MSP1P28737 YDR095CYDR095C 411 nt14.86□□□□□ -0.03
MSP1P28737 EMI2YDR516C 1503 nt14.82□□□□□ -0.04
MSP1P28737 YBR220CYBR220C 1683 nt14.75□□□□□ -0.05
MSP1P28737 FUN26YAL022C 1554 nt14.69□□□□□ -0.06
MSP1P28737 BDH2YAL061W 1254 nt14.69□□□□□ -0.06
MSP1P28737 YMR090WYMR090W 684 nt14.67□□□□□ -0.06
MSP1P28737 CAC2YML102W 1407 nt14.66□□□□□ -0.06
MSP1P28737 YDL221WYDL221W 552 nt14.65□□□□□ -0.06
MSP1P28737 PTP1YDL230W 1008 nt14.65□□□□□ -0.06
MSP1P28737 ALF1YNL148C 765 nt14.58□□□□□ -0.08
MSP1P28737 RPP2AYOL039W 321 nt14.58□□□□□ -0.08
MSP1P28737 SDH1YKL148C 1923 nt14.58□□□□□ -0.08
MSP1P28737 TRM9YML014W 840 nt14.51□□□□□ -0.09
MSP1P28737 PST2YDR032C 597 nt14.48□□□□□ -0.09
MSP1P28737 WWM1YFL010C 636 nt14.48□□□□□ -0.09
MSP1P28737 IRC15YPL017C 1500 nt14.43□□□□□ -0.1
MSP1P28737 CCT6YDR188W 1641 nt14.41□□□□□ -0.1
MSP1P28737 SCC4YER147C 1875 nt14.4□□□□□ -0.1
MSP1P28737 SIS1YNL007C 1059 nt14.39□□□□□ -0.11
MSP1P28737 LSM3YLR438C-A 270 nt14.36□□□□□ -0.11
MSP1P28737 GIS3YLR094C 1509 nt14.36□□□□□ -0.11
MSP1P28737 PCH2YBR186W 1695 nt14.3□□□□□ -0.12
MSP1P28737 PAC11YDR488C 1602 nt14.29□□□□□ -0.12
MSP1P28737 ART5YGR068C 1761 nt14.28□□□□□ -0.12
MSP1P28737 SUF2tP(AGG)C 72 nt14.28□□□□□ -0.12
MSP1P28737 SUF10tP(AGG)N 72 nt14.28□□□□□ -0.12
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms