Protein–RNA interactions for Protein: Q06696

VPS36, Vacuolar protein-sorting-associated protein 36, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS36Q06696 NSR1YGR159C 1245 nt18.83■□□□□ 0.6
VPS36Q06696 YML009W-BYML009W-B 477 nt18.71■□□□□ 0.59
VPS36Q06696 NOP1YDL014W 984 nt18.1■□□□□ 0.49
VPS36Q06696 MDJ1YFL016C 1536 nt16.91■□□□□ 0.3
VPS36Q06696 YKL036CYKL036C 393 nt16.5■□□□□ 0.23
VPS36Q06696 SRX1YKL086W 384 nt15.83■□□□□ 0.12
VPS36Q06696 Q0297Q0297 156 nt15.8■□□□□ 0.12
VPS36Q06696 YJL027CYJL027C 417 nt15.59■□□□□ 0.09
VPS36Q06696 YCR051WYCR051W 669 nt14.97□□□□□ -0.01
VPS36Q06696 DBP2YNL112W 1641 nt14.9□□□□□ -0.02
VPS36Q06696 SCS3YGL126W 1143 nt14.89□□□□□ -0.03
VPS36Q06696 SSA3YBL075C 1950 nt14.53□□□□□ -0.08
VPS36Q06696 YBR190WYBR190W 312 nt14.5□□□□□ -0.09
VPS36Q06696 TRN1tP(UGG)A 72 nt14.46□□□□□ -0.09
VPS36Q06696 SUF9tP(UGG)F 72 nt14.46□□□□□ -0.09
VPS36Q06696 SUF8tP(UGG)H 72 nt14.46□□□□□ -0.09
VPS36Q06696 tP(UGG)LtP(UGG)L 72 nt14.46□□□□□ -0.09
VPS36Q06696 SUF7tP(UGG)M 72 nt14.46□□□□□ -0.09
VPS36Q06696 tP(UGG)N1tP(UGG)N1 72 nt14.46□□□□□ -0.09
VPS36Q06696 tP(UGG)N2tP(UGG)N2 72 nt14.46□□□□□ -0.09
VPS36Q06696 tP(UGG)O1tP(UGG)O1 72 nt14.46□□□□□ -0.09
VPS36Q06696 SUF11tP(UGG)O2 72 nt14.46□□□□□ -0.09
VPS36Q06696 YOL085CYOL085C 342 nt14.31□□□□□ -0.12
VPS36Q06696 CCC1YLR220W 969 nt14.26□□□□□ -0.13
VPS36Q06696 RPP1BYDL130W 321 nt14.16□□□□□ -0.14
VPS36Q06696 RTC3YHR087W 336 nt14.12□□□□□ -0.15
VPS36Q06696 PKP1YIL042C 1185 nt14.08□□□□□ -0.16
VPS36Q06696 RVS167YDR388W 1449 nt13.91□□□□□ -0.18
VPS36Q06696 SCJ1YMR214W 1134 nt13.83□□□□□ -0.2
VPS36Q06696 tP(UGG)O3tP(UGG)O3 72 nt13.59□□□□□ -0.23
VPS36Q06696 PET122YER153C 765 nt13.56□□□□□ -0.24
VPS36Q06696 SHR5YOL110W 714 nt13.4□□□□□ -0.26
VPS36Q06696 PUT4YOR348C 1884 nt13.35□□□□□ -0.27
VPS36Q06696 SCR1SCR1 522 nt13.32□□□□□ -0.28
VPS36Q06696 ATS1YAL020C 1002 nt13.26□□□□□ -0.29
VPS36Q06696 YDJ1YNL064C 1230 nt13.17□□□□□ -0.3
VPS36Q06696 URN1YPR152C 1398 nt13.16□□□□□ -0.3
VPS36Q06696 RRN5YLR141W 1092 nt13.14□□□□□ -0.31
VPS36Q06696 DEP1YAL013W 1218 nt13.07□□□□□ -0.32
VPS36Q06696 ARE1YCR048W 1833 nt13.04□□□□□ -0.32
VPS36Q06696 OPI9YLR338W 858 nt13.03□□□□□ -0.32
VPS36Q06696 SAH1YER043C 1350 nt12.99□□□□□ -0.33
VPS36Q06696 RPN10YHR200W 807 nt12.91□□□□□ -0.34
VPS36Q06696 YER088W-BYER088W-B 147 nt12.89□□□□□ -0.35
VPS36Q06696 POA1YBR022W 534 nt12.89□□□□□ -0.35
VPS36Q06696 GAR1YHR089C 618 nt12.88□□□□□ -0.35
VPS36Q06696 YNL208WYNL208W 600 nt12.86□□□□□ -0.35
VPS36Q06696 YHR049C-AYHR049C-A 297 nt12.85□□□□□ -0.35
VPS36Q06696 RSB1YOR049C 1065 nt12.78□□□□□ -0.36
VPS36Q06696 BSC6YOL137W 1494 nt12.66□□□□□ -0.38
VPS36Q06696 PUN1YLR414C 792 nt12.65□□□□□ -0.38
VPS36Q06696 SSA4YER103W 1929 nt12.56□□□□□ -0.4
VPS36Q06696 YJR018WYJR018W 363 nt12.54□□□□□ -0.4
VPS36Q06696 PTC2YER089C 1395 nt12.52□□□□□ -0.41
VPS36Q06696 BUD23YCR047C 828 nt12.51□□□□□ -0.41
VPS36Q06696 TIR1YER011W 765 nt12.47□□□□□ -0.41
VPS36Q06696 Q0182Q0182 405 nt12.45□□□□□ -0.42
VPS36Q06696 SPT5YML010W 3192 nt12.44□□□□□ -0.42
VPS36Q06696 NAB2YGL122C 1578 nt12.39□□□□□ -0.43
VPS36Q06696 SSA1YAL005C 1929 nt12.37□□□□□ -0.43
VPS36Q06696 PST2YDR032C 597 nt12.34□□□□□ -0.43
VPS36Q06696 YJR120WYJR120W 351 nt12.34□□□□□ -0.43
VPS36Q06696 NVJ2YPR091C 2313 nt12.24□□□□□ -0.45
VPS36Q06696 PAC11YDR488C 1602 nt12.23□□□□□ -0.45
VPS36Q06696 FIS1YIL065C 468 nt12.22□□□□□ -0.45
VPS36Q06696 RPP2BYDR382W 333 nt12.21□□□□□ -0.45
VPS36Q06696 DAL1YIR027C 1383 nt12.19□□□□□ -0.46
VPS36Q06696 BDF1YLR399C 2061 nt12.17□□□□□ -0.46
VPS36Q06696 SRB2YHR041C 633 nt12.15□□□□□ -0.46
VPS36Q06696 MOT3YMR070W 1473 nt12.14□□□□□ -0.47
VPS36Q06696 INM2YDR287W 879 nt12.13□□□□□ -0.47
VPS36Q06696 FPR4YLR449W 1179 nt12.11□□□□□ -0.47
VPS36Q06696 PHO4YFR034C 939 nt12.08□□□□□ -0.48
VPS36Q06696 FPS1YLL043W 2010 nt12.03□□□□□ -0.48
VPS36Q06696 TAT1YBR069C 1860 nt11.98□□□□□ -0.49
VPS36Q06696 YBL100CYBL100C 315 nt11.96□□□□□ -0.49
VPS36Q06696 BDH2YAL061W 1254 nt11.95□□□□□ -0.5
VPS36Q06696 YPS1YLR120C 1710 nt11.93□□□□□ -0.5
VPS36Q06696 MEP2YNL142W 1500 nt11.92□□□□□ -0.5
VPS36Q06696 WWM1YFL010C 636 nt11.88□□□□□ -0.51
VPS36Q06696 SHU1YHL006C 453 nt11.87□□□□□ -0.51
VPS36Q06696 YDR095CYDR095C 411 nt11.83□□□□□ -0.52
VPS36Q06696 FUN26YAL022C 1554 nt11.83□□□□□ -0.52
VPS36Q06696 YHR165W-AYHR165W-A 312 nt11.78□□□□□ -0.52
VPS36Q06696 LSM3YLR438C-A 270 nt11.76□□□□□ -0.53
VPS36Q06696 TRM9YML014W 840 nt11.75□□□□□ -0.53
VPS36Q06696 YGR021WYGR021W 873 nt11.74□□□□□ -0.53
VPS36Q06696 YAL037C-BYAL037C-B 975 nt11.74□□□□□ -0.53
VPS36Q06696 DCW1YKL046C 1350 nt11.73□□□□□ -0.53
VPS36Q06696 HOM6YJR139C 1080 nt11.71□□□□□ -0.53
VPS36Q06696 YFL021C-AYFL021C-A 855 nt11.7□□□□□ -0.54
VPS36Q06696 YKL097CYKL097C 411 nt11.69□□□□□ -0.54
VPS36Q06696 ALF1YNL148C 765 nt11.68□□□□□ -0.54
VPS36Q06696 CCT6YDR188W 1641 nt11.67□□□□□ -0.54
VPS36Q06696 PTP1YDL230W 1008 nt11.6□□□□□ -0.55
VPS36Q06696 RPP2AYOL039W 321 nt11.6□□□□□ -0.55
VPS36Q06696 MNP1YGL068W 585 nt11.59□□□□□ -0.55
VPS36Q06696 EMI2YDR516C 1503 nt11.57□□□□□ -0.56
VPS36Q06696 SUF2tP(AGG)C 72 nt11.56□□□□□ -0.56
VPS36Q06696 SUF10tP(AGG)N 72 nt11.56□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms