RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeastyeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF3YDL194W RQC2Q12532 1038 aaKnown RBP8.92□□□□□ -0.98
SNF3YDL194W DRS1P32892 752 aaKnown RBP8.56□□□□□ -1.04
SNF3YDL194W TAF7Q05021 590 aa8.48□□□□□ -1.05
SNF3YDL194W TFA1P36100 482 aa8.46□□□□□ -1.06
SNF3YDL194W BFR2Q06631 534 aaKnown RBP7.98□□□□□ -1.13
SNF3YDL194W URN1Q06525 465 aaKnown RBP7.63□□□□□ -1.19
SNF3YDL194W LEO1P38439 464 aa7.54□□□□□ -1.2
SNF3YDL194W DMA1P38823 416 aa7.43□□□□□ -1.22
SNF3YDL194W NAP1P25293 417 aaKnown RBP7.33□□□□□ -1.24
SNF3YDL194W MTC1P47018 478 aaKnown RBP7.27□□□□□ -1.25
SNF3YDL194W IOC4Q04213 475 aa7.24□□□□□ -1.25
SNF3YDL194W AVT3P36062 692 aa7.2□□□□□ -1.26
SNF3YDL194W AIM44Q99299 758 aa7.17□□□□□ -1.26
SNF3YDL194W YRB30P53107 440 aaPredicted RBP7.17□□□□□ -1.26
SNF3YDL194W IFH1P39520 1085 aa7.12□□□□□ -1.27
SNF3YDL194W SIS2P36024 562 aa7.04□□□□□ -1.28
SNF3YDL194W YFR016CP43597 1233 aaKnown RBP7□□□□□ -1.29
SNF3YDL194W ORC1P54784 914 aaPredicted RBP7□□□□□ -1.29
SNF3YDL194W LEU3P08638 886 aa6.94□□□□□ -1.3
SNF3YDL194W TOP1P04786 769 aa6.93□□□□□ -1.3
SNF3YDL194W DIP2Q12220 943 aaPredicted RBP6.92□□□□□ -1.3
SNF3YDL194W KRI1P42846 591 aaKnown RBP6.9□□□□□ -1.3
SNF3YDL194W SNU71P53207 620 aaKnown RBP6.9□□□□□ -1.3
SNF3YDL194W ABP1P15891 592 aaKnown RBP6.86□□□□□ -1.31
SNF3YDL194W DMA2P53924 522 aa6.84□□□□□ -1.31
SNF3YDL194W EBP2P36049 427 aaKnown RBP6.82□□□□□ -1.32
SNF3YDL194W RPS0BP46654 252 aaKnown RBP6.82□□□□□ -1.32
SNF3YDL194W MNN4P36044 1178 aa6.79□□□□□ -1.32
SNF3YDL194W RLF2Q12495 606 aa6.79□□□□□ -1.32
SNF3YDL194W CAB3P36076 571 aa6.77□□□□□ -1.33
SNF3YDL194W SAS10Q12136 610 aaPredicted RBP6.7□□□□□ -1.34
SNF3YDL194W MDG1P53885 366 aa6.67□□□□□ -1.34
SNF3YDL194W CWC22P53333 577 aaKnown RBP6.66□□□□□ -1.34
SNF3YDL194W SWE1P32944 819 aa6.63□□□□□ -1.35
SNF3YDL194W BRL1P38770 471 aa6.63□□□□□ -1.35
SNF3YDL194W GIN4Q12263 1142 aa6.62□□□□□ -1.35
SNF3YDL194W RPN1P38764 993 aaKnown RBP6.61□□□□□ -1.35
SNF3YDL194W NUG1P40010 520 aaKnown RBP6.58□□□□□ -1.36
SNF3YDL194W ATG36P46983 293 aa6.57□□□□□ -1.36
SNF3YDL194W RLP24Q07915 199 aaKnown RBP6.57□□□□□ -1.36
SNF3YDL194W NOP8Q08287 484 aaPredicted RBP6.56□□□□□ -1.36
SNF3YDL194W YML020WQ03722 664 aa6.55□□□□□ -1.36
SNF3YDL194W SUB1P54000 292 aaKnown RBP6.53□□□□□ -1.36
SNF3YDL194W VPS72Q03388 795 aa6.53□□□□□ -1.36
SNF3YDL194W ASF1P32447 279 aa6.52□□□□□ -1.37
SNF3YDL194W PSH1Q12161 406 aa6.52□□□□□ -1.37
SNF3YDL194W TOA1P32773 286 aa6.51□□□□□ -1.37
SNF3YDL194W TPO2P53283 614 aa6.5□□□□□ -1.37
SNF3YDL194W PTP3P40048 928 aa6.48□□□□□ -1.37
SNF3YDL194W HIF1Q12373 385 aa6.48□□□□□ -1.37
SNF3YDL194W LAM6Q08001 693 aa6.47□□□□□ -1.37
SNF3YDL194W DEF1P35732 738 aaKnown RBP6.46□□□□□ -1.37
SNF3YDL194W OSW7P43611 510 aa6.46□□□□□ -1.38
SNF3YDL194W CKB1P43639 278 aa6.46□□□□□ -1.38
SNF3YDL194W FAR11P53917 953 aa6.44□□□□□ -1.38
SNF3YDL194W NOP7P53261 605 aaKnown RBP6.43□□□□□ -1.38
SNF3YDL194W RTS3P53289 263 aa6.43□□□□□ -1.38
SNF3YDL194W DOS2P54858 310 aa6.41□□□□□ -1.38
SNF3YDL194W BRN1P38170 754 aa6.4□□□□□ -1.39
SNF3YDL194W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.4□□□□□ -1.39not detected
SNF3YDL194W SLX8P40072 274 aa6.38□□□□□ -1.39
SNF3YDL194W SPC42P36094 363 aa6.37□□□□□ -1.39
SNF3YDL194W BUD21Q08492 214 aaPredicted RBP6.36□□□□□ -1.39
SNF3YDL194W ISW1P38144 1129 aa6.36□□□□□ -1.39
SNF3YDL194W SSP1P38871 571 aa6.36□□□□□ -1.39
SNF3YDL194W NAB3P38996 802 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SNF3YDL194W SSF1P38789 453 aaPredicted RBP6.35□□□□□ -1.39
SNF3YDL194W RPS0AP32905 252 aaKnown RBP6.35□□□□□ -1.39
SNF3YDL194W GEF1P37020 779 aa6.35□□□□□ -1.39
SNF3YDL194W YTA7P40340 1379 aa6.35□□□□□ -1.39
SNF3YDL194W YJR008WP47085 338 aa6.34□□□□□ -1.39
SNF3YDL194W NHA1Q99271 985 aa6.33□□□□□ -1.4
SNF3YDL194W SSA1P10591 642 aaKnown RBP6.33□□□□□ -1.4
SNF3YDL194W SSA2P10592 639 aaKnown RBP6.33□□□□□ -1.4
SNF3YDL194W PDR1P12383 1068 aa6.32□□□□□ -1.4
SNF3YDL194W PAM1P37304 830 aaKnown RBP6.31□□□□□ -1.4
SNF3YDL194W MRX12P47084 519 aa6.31□□□□□ -1.4
SNF3YDL194W KIP3P53086 805 aaKnown RBP6.31□□□□□ -1.4
SNF3YDL194W NOP2P40991 618 aaKnown RBP6.3□□□□□ -1.4
SNF3YDL194W ZDS1P50111 915 aaKnown RBP6.3□□□□□ -1.4
SNF3YDL194W MPP10P47083 593 aaKnown RBP6.29□□□□□ -1.4
SNF3YDL194W FPR3P38911 411 aaKnown RBP6.28□□□□□ -1.4
SNF3YDL194W BRE1Q07457 700 aaKnown RBP6.28□□□□□ -1.4
SNF3YDL194W MET10P39692 1035 aa6.27□□□□□ -1.41
SNF3YDL194W SPT16P32558 1035 aaKnown RBP6.26□□□□□ -1.41
SNF3YDL194W TY4A-JP47023 414 aa6.26□□□□□ -1.41
SNF3YDL194W RPT2P40327 437 aaKnown RBP6.25□□□□□ -1.41
SNF3YDL194W ENV11P53246 860 aa6.25□□□□□ -1.41
SNF3YDL194W TLG1Q03322 224 aa6.25□□□□□ -1.41
SNF3YDL194W TIF4632P39936 914 aaKnown RBP6.24□□□□□ -1.41
SNF3YDL194W DAL5P15365 543 aa6.24□□□□□ -1.41
SNF3YDL194W RAD2P07276 1031 aa6.23□□□□□ -1.41
SNF3YDL194W OCA5P38738 679 aa6.23□□□□□ -1.41
SNF3YDL194W TAF13P11747 167 aa6.23□□□□□ -1.41
SNF3YDL194W SPT2P06843 333 aaPredicted RBP6.22□□□□□ -1.41
SNF3YDL194W UBX5Q06682 500 aa6.22□□□□□ -1.41
SNF3YDL194W AIM21P40563 679 aa6.21□□□□□ -1.42
SNF3YDL194W MAM3Q12296 706 aa6.21□□□□□ -1.42
SNF3YDL194W QCR6P00127 147 aa6.21□□□□□ -1.42
SNF3YDL194W HSP82P02829 709 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms