Protein–RNA interactions for Protein: P36172

VBA5, Vacuolar basic amino acid transporter 5, yeastyeast

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA5P36172 YML009W-BYML009W-B 477 nt21.71■■□□□ 1.07
VBA5P36172 NSR1YGR159C 1245 nt21.49■■□□□ 1.03
VBA5P36172 NOP1YDL014W 984 nt21.11■□□□□ 0.97
VBA5P36172 YKL036CYKL036C 393 nt19.56■□□□□ 0.72
VBA5P36172 MDJ1YFL016C 1536 nt19.04■□□□□ 0.64
VBA5P36172 Q0297Q0297 156 nt18.52■□□□□ 0.56
VBA5P36172 SRX1YKL086W 384 nt18.46■□□□□ 0.55
VBA5P36172 YJL027CYJL027C 417 nt18.28■□□□□ 0.52
VBA5P36172 SCS3YGL126W 1143 nt17.85■□□□□ 0.45
VBA5P36172 YCR051WYCR051W 669 nt17.52■□□□□ 0.4
VBA5P36172 YOL085CYOL085C 342 nt16.96■□□□□ 0.31
VBA5P36172 DBP2YNL112W 1641 nt16.88■□□□□ 0.29
VBA5P36172 PKP1YIL042C 1185 nt16.7■□□□□ 0.26
VBA5P36172 TRN1tP(UGG)A 72 nt16.65■□□□□ 0.26
VBA5P36172 SUF9tP(UGG)F 72 nt16.65■□□□□ 0.26
VBA5P36172 SUF8tP(UGG)H 72 nt16.65■□□□□ 0.26
VBA5P36172 tP(UGG)LtP(UGG)L 72 nt16.65■□□□□ 0.26
VBA5P36172 SUF7tP(UGG)M 72 nt16.65■□□□□ 0.26
VBA5P36172 tP(UGG)N1tP(UGG)N1 72 nt16.65■□□□□ 0.26
VBA5P36172 tP(UGG)N2tP(UGG)N2 72 nt16.65■□□□□ 0.26
VBA5P36172 tP(UGG)O1tP(UGG)O1 72 nt16.65■□□□□ 0.26
VBA5P36172 SUF11tP(UGG)O2 72 nt16.65■□□□□ 0.26
VBA5P36172 RPP1BYDL130W 321 nt16.62■□□□□ 0.25
VBA5P36172 CCC1YLR220W 969 nt16.49■□□□□ 0.23
VBA5P36172 YBR190WYBR190W 312 nt16.19■□□□□ 0.18
VBA5P36172 ATS1YAL020C 1002 nt15.98■□□□□ 0.15
VBA5P36172 PET122YER153C 765 nt15.88■□□□□ 0.13
VBA5P36172 SCJ1YMR214W 1134 nt15.88■□□□□ 0.13
VBA5P36172 RVS167YDR388W 1449 nt15.85■□□□□ 0.13
VBA5P36172 RTC3YHR087W 336 nt15.84■□□□□ 0.13
VBA5P36172 tP(UGG)O3tP(UGG)O3 72 nt15.78■□□□□ 0.12
VBA5P36172 SCR1SCR1 522 nt15.71■□□□□ 0.11
VBA5P36172 RRN5YLR141W 1092 nt15.43■□□□□ 0.06
VBA5P36172 SHR5YOL110W 714 nt15.34■□□□□ 0.05
VBA5P36172 YDJ1YNL064C 1230 nt15.25■□□□□ 0.03
VBA5P36172 YER088W-BYER088W-B 147 nt15.13■□□□□ 0.01
VBA5P36172 RSB1YOR049C 1065 nt15.13■□□□□ 0.01
VBA5P36172 GAR1YHR089C 618 nt14.92□□□□□ -0.02
VBA5P36172 DEP1YAL013W 1218 nt14.89□□□□□ -0.03
VBA5P36172 URN1YPR152C 1398 nt14.86□□□□□ -0.03
VBA5P36172 PST2YDR032C 597 nt14.79□□□□□ -0.04
VBA5P36172 PUT4YOR348C 1884 nt14.65□□□□□ -0.06
VBA5P36172 YNL208WYNL208W 600 nt14.65□□□□□ -0.06
VBA5P36172 RPN10YHR200W 807 nt14.64□□□□□ -0.07
VBA5P36172 OPI9YLR338W 858 nt14.62□□□□□ -0.07
VBA5P36172 SAH1YER043C 1350 nt14.53□□□□□ -0.08
VBA5P36172 ARE1YCR048W 1833 nt14.42□□□□□ -0.1
VBA5P36172 TIR1YER011W 765 nt14.4□□□□□ -0.1
VBA5P36172 Q0182Q0182 405 nt14.24□□□□□ -0.13
VBA5P36172 YKL097CYKL097C 411 nt14.24□□□□□ -0.13
VBA5P36172 YHR049C-AYHR049C-A 297 nt14.23□□□□□ -0.13
VBA5P36172 SSA1YAL005C 1929 nt14.23□□□□□ -0.13
VBA5P36172 POA1YBR022W 534 nt14.21□□□□□ -0.13
VBA5P36172 PUN1YLR414C 792 nt14.19□□□□□ -0.14
VBA5P36172 SHU1YHL006C 453 nt14.18□□□□□ -0.14
VBA5P36172 YJR018WYJR018W 363 nt14.18□□□□□ -0.14
VBA5P36172 SRB2YHR041C 633 nt14.03□□□□□ -0.16
VBA5P36172 PTC2YER089C 1395 nt14.03□□□□□ -0.16
VBA5P36172 YJR120WYJR120W 351 nt14.01□□□□□ -0.17
VBA5P36172 YAL037C-BYAL037C-B 975 nt13.95□□□□□ -0.18
VBA5P36172 BUD23YCR047C 828 nt13.91□□□□□ -0.18
VBA5P36172 RPP2BYDR382W 333 nt13.9□□□□□ -0.18
VBA5P36172 MOT3YMR070W 1473 nt13.89□□□□□ -0.19
VBA5P36172 BSC6YOL137W 1494 nt13.88□□□□□ -0.19
VBA5P36172 NAB2YGL122C 1578 nt13.82□□□□□ -0.2
VBA5P36172 WWM1YFL010C 636 nt13.8□□□□□ -0.2
VBA5P36172 YGR021WYGR021W 873 nt13.72□□□□□ -0.21
VBA5P36172 HOM6YJR139C 1080 nt13.69□□□□□ -0.22
VBA5P36172 YOR139CYOR139C 393 nt13.68□□□□□ -0.22
VBA5P36172 INM2YDR287W 879 nt13.65□□□□□ -0.22
VBA5P36172 MNP1YGL068W 585 nt13.65□□□□□ -0.22
VBA5P36172 FIS1YIL065C 468 nt13.65□□□□□ -0.22
VBA5P36172 BDH2YAL061W 1254 nt13.65□□□□□ -0.22
VBA5P36172 DAL1YIR027C 1383 nt13.65□□□□□ -0.22
VBA5P36172 FPR4YLR449W 1179 nt13.64□□□□□ -0.23
VBA5P36172 SSA3YBL075C 1950 nt13.62□□□□□ -0.23
VBA5P36172 YFL021C-AYFL021C-A 855 nt13.56□□□□□ -0.24
VBA5P36172 YBL100CYBL100C 315 nt13.55□□□□□ -0.24
VBA5P36172 PHO4YFR034C 939 nt13.54□□□□□ -0.24
VBA5P36172 NPL3YDR432W 1245 nt13.53□□□□□ -0.24
VBA5P36172 RKM5YLR137W 1104 nt13.49□□□□□ -0.25
VBA5P36172 LSM3YLR438C-A 270 nt13.48□□□□□ -0.25
VBA5P36172 YOL037CYOL037C 354 nt13.43□□□□□ -0.26
VBA5P36172 FUN26YAL022C 1554 nt13.4□□□□□ -0.26
VBA5P36172 TRM9YML014W 840 nt13.37□□□□□ -0.27
VBA5P36172 CCT6YDR188W 1641 nt13.24□□□□□ -0.29
VBA5P36172 YPS1YLR120C 1710 nt13.23□□□□□ -0.29
VBA5P36172 ALF1YNL148C 765 nt13.18□□□□□ -0.3
VBA5P36172 YDR095CYDR095C 411 nt13.17□□□□□ -0.3
VBA5P36172 SPT5YML010W 3192 nt13.15□□□□□ -0.3
VBA5P36172 tM(CAU)CtM(CAU)C 72 nt13.14□□□□□ -0.31
VBA5P36172 IMT4tM(CAU)E 72 nt13.14□□□□□ -0.31
VBA5P36172 IMT3tM(CAU)J3 72 nt13.14□□□□□ -0.31
VBA5P36172 IMT1tM(CAU)O1 72 nt13.14□□□□□ -0.31
VBA5P36172 IMT2tM(CAU)P 72 nt13.14□□□□□ -0.31
VBA5P36172 YLR281CYLR281C 468 nt13.13□□□□□ -0.31
VBA5P36172 SUF2tP(AGG)C 72 nt13.11□□□□□ -0.31
VBA5P36172 SUF10tP(AGG)N 72 nt13.11□□□□□ -0.31
VBA5P36172 YHR165W-AYHR165W-A 312 nt13.09□□□□□ -0.31
VBA5P36172 WHI5YOR083W 888 nt13.08□□□□□ -0.32
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms