RNA–Protein interactions for RNA: YJL020C

BBC1, Transcript of Protein possibly involved in assembly of actin patches, yeast

Gene BBC1, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BBC1	YJL020C	HMI1	Q12039	706 aa		4.65	□□□□□ -1.66
BBC1	YJL020C	CHS5	Q12114	671 aa	Known RBP	4.65	□□□□□ -1.66
BBC1	YJL020C	GYP5	Q12344	894 aa		4.65	□□□□□ -1.66
BBC1	YJL020C	SWI5	P08153	709 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	HMG1	P12683	1054 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	CAD1	P24813	409 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	PHO84	P25297	587 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	SMI1	P32566	505 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	YKR018C	P36114	725 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	PAN5	P38787	379 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	RIX1	P38883	763 aa	Predicted RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	MSN5	P52918	1224 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	SLD3	P53135	668 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	REG1	Q00816	1014 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	DON1	Q05610	365 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	ISR1	Q06098	443 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	YRM1	Q12340	786 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	AVL9	Q12500	764 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	TIF6	Q12522	245 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	YOL159C-A	Q3E769	90 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	BRR1	Q99177	341 aa	Predicted RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	YLR358C	O13565	187 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	ARG81	P05085	880 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	ADE2	P21264	571 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	SSE1	P32589	693 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
BBC1	YJL020C	NCL1	P38205	684 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	YMR124W	P39523	943 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	GDI1	P39958	451 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	NTA1	P40354	457 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	PRY3	P47033	881 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	TRF5	P48561	642 aa	Known RBP	4.65	□□□□□ -1.67
BBC1	YJL020C	YOR352W	Q08816	343 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	SFI1	Q12369	946 aa		4.65	□□□□□ -1.67
BBC1	YJL020C	POM152	P39685	1337 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	NOT3	P06102	836 aa	Known RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	RPL19A	P0CX82	189 aa	Known RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	RPL19B	P0CX83	189 aa	Predicted RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	MSD1	P15179	658 aa	Known RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	MSG5	P38590	489 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	KSP1	P38691	1029 aa	Known RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	MET12	P46151	657 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	SCY1	P53009	804 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	TAD1	P53065	400 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	TBF1	Q02457	562 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	UBX2	Q04228	584 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	ATG33	Q06485	197 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	PML1	Q07930	204 aa	Predicted RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	MDY2	Q12285	212 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	GRX6	Q12438	231 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	FUM1	P08417	488 aa	Known RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	GSY1	P23337	708 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	MGM1	P32266	881 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	YEL043W	P32618	956 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	MRP4	P32902	394 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	TIF5	P38431	405 aa	Known RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	PIH1	P38768	344 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	VMA13	P41807	478 aa	Known RBP	4.64	□□□□□ -1.67
BBC1	YJL020C	MNT4	P53745	580 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	ARP5	P53946	755 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	PSF3	Q12146	194 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	APM4	Q99186	491 aa		4.64	□□□□□ -1.67
BBC1	YJL020C	RPS9B	P05755	195 aa	Known RBP	4.63	□□□□□ -1.67
BBC1	YJL020C	KEX2	P13134	814 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	PUT4	P15380	627 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
BBC1	YJL020C	UBC1	P21734	215 aa	Known RBP	4.63	□□□□□ -1.67
BBC1	YJL020C	ATP12	P22135	325 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	PTR2	P32901	601 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	IFA38	P38286	347 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	SMK1	P41808	388 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	YFL052W	P43551	465 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	SIP4	P46954	829 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	TEL2	P53038	688 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	SIW14	P53965	281 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	ADA2	Q02336	434 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	VPS20	Q04272	221 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	VBA4	Q04602	768 aa	Known RBP	4.63	□□□□□ -1.67
BBC1	YJL020C	RTC5	Q12108	567 aa	Known RBP	4.63	□□□□□ -1.67
BBC1	YJL020C	CAF20	P12962	161 aa	Known RBP	4.63	□□□□□ -1.67
BBC1	YJL020C	ITR1	P30605	584 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	RPC82	P32349	654 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	YUH1	P35127	236 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	GCS1	P35197	352 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	HEL1	P36113	551 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	PET10	P36139	283 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	RGA1	P39083	1007 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	SAH1	P39954	449 aa	Known RBP	4.63	□□□□□ -1.67
BBC1	YJL020C	THI6	P41835	540 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	RPA14	P50106	137 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	CIR2	Q08822	631 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	DBP2	P24783	546 aa	Known RBP	4.63	□□□□□ -1.67
BBC1	YJL020C	VMA3	P25515	160 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	YSW1	P38280	609 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	BDH2	P39713	417 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	PUG1	P40100	303 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	CTF18	P49956	741 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	HAP5	Q02516	242 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	INP2	Q03824	705 aa		4.63	□□□□□ -1.67
BBC1	YJL020C	GUD1	Q07729	489 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms