Protein–RNA interactions for Protein: P38883

RIX1, Pre-rRNA-processing protein RIX1, yeastyeast

Predicted RBP Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIX1P38883 NSR1YGR159C 1245 nt18.4■□□□□ 0.54
RIX1P38883 YML009W-BYML009W-B 477 nt18.06■□□□□ 0.48
RIX1P38883 NOP1YDL014W 984 nt17.68■□□□□ 0.42
RIX1P38883 SSA3YBL075C 1950 nt17.4■□□□□ 0.38
RIX1P38883 MDJ1YFL016C 1536 nt17.17■□□□□ 0.34
RIX1P38883 YKL036CYKL036C 393 nt16.53■□□□□ 0.24
RIX1P38883 YJL027CYJL027C 417 nt15.79■□□□□ 0.12
RIX1P38883 Q0297Q0297 156 nt15.62■□□□□ 0.09
RIX1P38883 SRX1YKL086W 384 nt15.49■□□□□ 0.07
RIX1P38883 SCS3YGL126W 1143 nt15.16■□□□□ 0.02
RIX1P38883 YBR190WYBR190W 312 nt15.09■□□□□ 0.01
RIX1P38883 PAC11YDR488C 1602 nt14.82□□□□□ -0.04
RIX1P38883 SSA4YER103W 1929 nt14.82□□□□□ -0.04
RIX1P38883 DBP2YNL112W 1641 nt14.81□□□□□ -0.04
RIX1P38883 PUT4YOR348C 1884 nt14.73□□□□□ -0.05
RIX1P38883 RTC3YHR087W 336 nt14.71□□□□□ -0.05
RIX1P38883 YCR051WYCR051W 669 nt14.62□□□□□ -0.07
RIX1P38883 NVJ2YPR091C 2313 nt14.52□□□□□ -0.09
RIX1P38883 SPT5YML010W 3192 nt14.46□□□□□ -0.1
RIX1P38883 BDF1YLR399C 2061 nt14.35□□□□□ -0.11
RIX1P38883 YOL085CYOL085C 342 nt14.33□□□□□ -0.12
RIX1P38883 POA1YBR022W 534 nt14.17□□□□□ -0.14
RIX1P38883 TAT1YBR069C 1860 nt14.16□□□□□ -0.14
RIX1P38883 BSC6YOL137W 1494 nt14.16□□□□□ -0.14
RIX1P38883 FPS1YLL043W 2010 nt14.11□□□□□ -0.15
RIX1P38883 PKP1YIL042C 1185 nt14.01□□□□□ -0.17
RIX1P38883 ARE1YCR048W 1833 nt14.01□□□□□ -0.17
RIX1P38883 RPP1BYDL130W 321 nt13.98□□□□□ -0.17
RIX1P38883 TRN1tP(UGG)A 72 nt13.92□□□□□ -0.18
RIX1P38883 SUF9tP(UGG)F 72 nt13.92□□□□□ -0.18
RIX1P38883 SUF8tP(UGG)H 72 nt13.92□□□□□ -0.18
RIX1P38883 tP(UGG)LtP(UGG)L 72 nt13.92□□□□□ -0.18
RIX1P38883 SUF7tP(UGG)M 72 nt13.92□□□□□ -0.18
RIX1P38883 tP(UGG)N1tP(UGG)N1 72 nt13.92□□□□□ -0.18
RIX1P38883 tP(UGG)N2tP(UGG)N2 72 nt13.92□□□□□ -0.18
RIX1P38883 tP(UGG)O1tP(UGG)O1 72 nt13.92□□□□□ -0.18
RIX1P38883 SUF11tP(UGG)O2 72 nt13.92□□□□□ -0.18
RIX1P38883 YHR049C-AYHR049C-A 297 nt13.92□□□□□ -0.18
RIX1P38883 CCC1YLR220W 969 nt13.79□□□□□ -0.2
RIX1P38883 RVS167YDR388W 1449 nt13.77□□□□□ -0.21
RIX1P38883 SCJ1YMR214W 1134 nt13.77□□□□□ -0.21
RIX1P38883 ATS1YAL020C 1002 nt13.63□□□□□ -0.23
RIX1P38883 URN1YPR152C 1398 nt13.58□□□□□ -0.23
RIX1P38883 SSA1YAL005C 1929 nt13.58□□□□□ -0.24
RIX1P38883 SAH1YER043C 1350 nt13.54□□□□□ -0.24
RIX1P38883 BUD23YCR047C 828 nt13.51□□□□□ -0.25
RIX1P38883 MEP2YNL142W 1500 nt13.45□□□□□ -0.26
RIX1P38883 UME6YDR207C 2511 nt13.34□□□□□ -0.27
RIX1P38883 PET122YER153C 765 nt13.31□□□□□ -0.28
RIX1P38883 OPI9YLR338W 858 nt13.29□□□□□ -0.28
RIX1P38883 YJL225CYJL225C 5277 nt13.23□□□□□ -0.29
RIX1P38883 YBR220CYBR220C 1683 nt13.21□□□□□ -0.3
RIX1P38883 PCH2YBR186W 1695 nt13.19□□□□□ -0.3
RIX1P38883 tP(UGG)O3tP(UGG)O3 72 nt13.19□□□□□ -0.3
RIX1P38883 SCR1SCR1 522 nt13.19□□□□□ -0.3
RIX1P38883 YMR090WYMR090W 684 nt13.17□□□□□ -0.3
RIX1P38883 GUT2YIL155C 1950 nt13.14□□□□□ -0.31
RIX1P38883 DCW1YKL046C 1350 nt13.13□□□□□ -0.31
RIX1P38883 BOR1YNL275W 1731 nt13.13□□□□□ -0.31
RIX1P38883 SEC11YIR022W 504 nt13.09□□□□□ -0.31
RIX1P38883 SHR5YOL110W 714 nt13.09□□□□□ -0.31
RIX1P38883 NAB2YGL122C 1578 nt13.06□□□□□ -0.32
RIX1P38883 DEP1YAL013W 1218 nt13.02□□□□□ -0.33
RIX1P38883 EMI2YDR516C 1503 nt12.98□□□□□ -0.33
RIX1P38883 PTC2YER089C 1395 nt12.98□□□□□ -0.33
RIX1P38883 PUN1YLR414C 792 nt12.97□□□□□ -0.33
RIX1P38883 RRN5YLR141W 1092 nt12.95□□□□□ -0.34
RIX1P38883 SDH1YKL148C 1923 nt12.9□□□□□ -0.35
RIX1P38883 RPN10YHR200W 807 nt12.85□□□□□ -0.35
RIX1P38883 MCH5YOR306C 1566 nt12.84□□□□□ -0.35
RIX1P38883 YDJ1YNL064C 1230 nt12.8□□□□□ -0.36
RIX1P38883 PIB2YGL023C 1908 nt12.76□□□□□ -0.37
RIX1P38883 YDL221WYDL221W 552 nt12.75□□□□□ -0.37
RIX1P38883 YHR165W-AYHR165W-A 312 nt12.74□□□□□ -0.37
RIX1P38883 YPS1YLR120C 1710 nt12.72□□□□□ -0.37
RIX1P38883 RTF1YGL244W 1677 nt12.71□□□□□ -0.37
RIX1P38883 YER088W-BYER088W-B 147 nt12.71□□□□□ -0.37
RIX1P38883 YNL208WYNL208W 600 nt12.7□□□□□ -0.38
RIX1P38883 RSB1YOR049C 1065 nt12.7□□□□□ -0.38
RIX1P38883 FIS1YIL065C 468 nt12.66□□□□□ -0.38
RIX1P38883 PST2YDR032C 597 nt12.62□□□□□ -0.39
RIX1P38883 DAL1YIR027C 1383 nt12.6□□□□□ -0.39
RIX1P38883 SCC4YER147C 1875 nt12.59□□□□□ -0.39
RIX1P38883 YJR018WYJR018W 363 nt12.56□□□□□ -0.4
RIX1P38883 FPR4YLR449W 1179 nt12.55□□□□□ -0.4
RIX1P38883 ALG12YNR030W 1656 nt12.52□□□□□ -0.4
RIX1P38883 BOP3YNL042W 1191 nt12.52□□□□□ -0.41
RIX1P38883 YSC84YHR016C 1407 nt12.47□□□□□ -0.41
RIX1P38883 RDN37-1RDN37-1 5354 nt12.47□□□□□ -0.41
RIX1P38883 RDN37-2RDN37-2 5354 nt12.47□□□□□ -0.41
RIX1P38883 PHO4YFR034C 939 nt12.46□□□□□ -0.41
RIX1P38883 PTK1YKL198C 1989 nt12.42□□□□□ -0.42
RIX1P38883 YDR095CYDR095C 411 nt12.42□□□□□ -0.42
RIX1P38883 GAR1YHR089C 618 nt12.38□□□□□ -0.43
RIX1P38883 CAC2YML102W 1407 nt12.36□□□□□ -0.43
RIX1P38883 HSP60YLR259C 1719 nt12.31□□□□□ -0.44
RIX1P38883 YHL050CYHL050C 2094 nt12.28□□□□□ -0.44
RIX1P38883 INM2YDR287W 879 nt12.28□□□□□ -0.44
RIX1P38883 YFL054CYFL054C 1941 nt12.21□□□□□ -0.45
RIX1P38883 YJR120WYJR120W 351 nt12.21□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms