Protein–RNA interactions for Protein: P41807

VMA13, V-type proton ATPase subunit H, yeastyeast

Known RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA13P41807 NSR1YGR159C 1245 nt20.04■□□□□ 0.8
VMA13P41807 YML009W-BYML009W-B 477 nt19.92■□□□□ 0.78
VMA13P41807 NOP1YDL014W 984 nt19.24■□□□□ 0.67
VMA13P41807 MDJ1YFL016C 1536 nt18.03■□□□□ 0.48
VMA13P41807 YKL036CYKL036C 393 nt17.59■□□□□ 0.41
VMA13P41807 SRX1YKL086W 384 nt16.89■□□□□ 0.29
VMA13P41807 Q0297Q0297 156 nt16.86■□□□□ 0.29
VMA13P41807 YJL027CYJL027C 417 nt16.55■□□□□ 0.24
VMA13P41807 DBP2YNL112W 1641 nt15.95■□□□□ 0.14
VMA13P41807 SCS3YGL126W 1143 nt15.94■□□□□ 0.14
VMA13P41807 YCR051WYCR051W 669 nt15.93■□□□□ 0.14
VMA13P41807 TRN1tP(UGG)A 72 nt15.44■□□□□ 0.06
VMA13P41807 SUF9tP(UGG)F 72 nt15.44■□□□□ 0.06
VMA13P41807 SUF8tP(UGG)H 72 nt15.44■□□□□ 0.06
VMA13P41807 tP(UGG)LtP(UGG)L 72 nt15.44■□□□□ 0.06
VMA13P41807 SUF7tP(UGG)M 72 nt15.44■□□□□ 0.06
VMA13P41807 tP(UGG)N1tP(UGG)N1 72 nt15.44■□□□□ 0.06
VMA13P41807 tP(UGG)N2tP(UGG)N2 72 nt15.44■□□□□ 0.06
VMA13P41807 tP(UGG)O1tP(UGG)O1 72 nt15.44■□□□□ 0.06
VMA13P41807 SUF11tP(UGG)O2 72 nt15.44■□□□□ 0.06
VMA13P41807 YBR190WYBR190W 312 nt15.41■□□□□ 0.06
VMA13P41807 YOL085CYOL085C 342 nt15.28■□□□□ 0.04
VMA13P41807 CCC1YLR220W 969 nt15.17■□□□□ 0.02
VMA13P41807 RPP1BYDL130W 321 nt15.11■□□□□ 0.01
VMA13P41807 PKP1YIL042C 1185 nt15.04■□□□□ -0
VMA13P41807 RTC3YHR087W 336 nt14.97□□□□□ -0.01
VMA13P41807 SCJ1YMR214W 1134 nt14.8□□□□□ -0.04
VMA13P41807 RVS167YDR388W 1449 nt14.76□□□□□ -0.05
VMA13P41807 tP(UGG)O3tP(UGG)O3 72 nt14.49□□□□□ -0.09
VMA13P41807 PET122YER153C 765 nt14.48□□□□□ -0.09
VMA13P41807 SHR5YOL110W 714 nt14.27□□□□□ -0.13
VMA13P41807 PUT4YOR348C 1884 nt14.25□□□□□ -0.13
VMA13P41807 ATS1YAL020C 1002 nt14.18□□□□□ -0.14
VMA13P41807 SCR1SCR1 522 nt14.16□□□□□ -0.14
VMA13P41807 YDJ1YNL064C 1230 nt14.03□□□□□ -0.16
VMA13P41807 RRN5YLR141W 1092 nt14.01□□□□□ -0.17
VMA13P41807 URN1YPR152C 1398 nt14□□□□□ -0.17
VMA13P41807 ARE1YCR048W 1833 nt13.92□□□□□ -0.18
VMA13P41807 DEP1YAL013W 1218 nt13.91□□□□□ -0.18
VMA13P41807 OPI9YLR338W 858 nt13.88□□□□□ -0.19
VMA13P41807 SSA3YBL075C 1950 nt13.86□□□□□ -0.19
VMA13P41807 SAH1YER043C 1350 nt13.83□□□□□ -0.19
VMA13P41807 YER088W-BYER088W-B 147 nt13.76□□□□□ -0.21
VMA13P41807 GAR1YHR089C 618 nt13.71□□□□□ -0.21
VMA13P41807 POA1YBR022W 534 nt13.71□□□□□ -0.21
VMA13P41807 YHR049C-AYHR049C-A 297 nt13.68□□□□□ -0.22
VMA13P41807 RPN10YHR200W 807 nt13.67□□□□□ -0.22
VMA13P41807 YNL208WYNL208W 600 nt13.67□□□□□ -0.22
VMA13P41807 RSB1YOR049C 1065 nt13.61□□□□□ -0.23
VMA13P41807 BSC6YOL137W 1494 nt13.48□□□□□ -0.25
VMA13P41807 PUN1YLR414C 792 nt13.43□□□□□ -0.26
VMA13P41807 YJR018WYJR018W 363 nt13.33□□□□□ -0.28
VMA13P41807 PTC2YER089C 1395 nt13.31□□□□□ -0.28
VMA13P41807 TIR1YER011W 765 nt13.28□□□□□ -0.28
VMA13P41807 BUD23YCR047C 828 nt13.27□□□□□ -0.29
VMA13P41807 SSA1YAL005C 1929 nt13.23□□□□□ -0.29
VMA13P41807 YJR120WYJR120W 351 nt13.23□□□□□ -0.29
VMA13P41807 SPT5YML010W 3192 nt13.22□□□□□ -0.29
VMA13P41807 PST2YDR032C 597 nt13.21□□□□□ -0.29
VMA13P41807 NAB2YGL122C 1578 nt13.17□□□□□ -0.3
VMA13P41807 FIS1YIL065C 468 nt13.06□□□□□ -0.32
VMA13P41807 SRB2YHR041C 633 nt13.05□□□□□ -0.32
VMA13P41807 DAL1YIR027C 1383 nt12.95□□□□□ -0.34
VMA13P41807 RPP2BYDR382W 333 nt12.93□□□□□ -0.34
VMA13P41807 INM2YDR287W 879 nt12.87□□□□□ -0.35
VMA13P41807 PHO4YFR034C 939 nt12.86□□□□□ -0.35
VMA13P41807 FPR4YLR449W 1179 nt12.84□□□□□ -0.35
VMA13P41807 BDH2YAL061W 1254 nt12.73□□□□□ -0.37
VMA13P41807 YPS1YLR120C 1710 nt12.73□□□□□ -0.37
VMA13P41807 SHU1YHL006C 453 nt12.72□□□□□ -0.37
VMA13P41807 YBL100CYBL100C 315 nt12.72□□□□□ -0.37
VMA13P41807 SSA4YER103W 1929 nt12.71□□□□□ -0.37
VMA13P41807 MEP2YNL142W 1500 nt12.69□□□□□ -0.38
VMA13P41807 WWM1YFL010C 636 nt12.67□□□□□ -0.38
VMA13P41807 YDR095CYDR095C 411 nt12.61□□□□□ -0.39
VMA13P41807 FUN26YAL022C 1554 nt12.59□□□□□ -0.39
VMA13P41807 YAL037C-BYAL037C-B 975 nt12.55□□□□□ -0.4
VMA13P41807 HOM6YJR139C 1080 nt12.52□□□□□ -0.41
VMA13P41807 YKL097CYKL097C 411 nt12.52□□□□□ -0.41
VMA13P41807 DCW1YKL046C 1350 nt12.52□□□□□ -0.41
VMA13P41807 LSM3YLR438C-A 270 nt12.51□□□□□ -0.41
VMA13P41807 YGR021WYGR021W 873 nt12.5□□□□□ -0.41
VMA13P41807 YHR165W-AYHR165W-A 312 nt12.5□□□□□ -0.41
VMA13P41807 YFL021C-AYFL021C-A 855 nt12.47□□□□□ -0.41
VMA13P41807 TRM9YML014W 840 nt12.45□□□□□ -0.42
VMA13P41807 CCT6YDR188W 1641 nt12.44□□□□□ -0.42
VMA13P41807 MNP1YGL068W 585 nt12.41□□□□□ -0.42
VMA13P41807 PTP1YDL230W 1008 nt12.4□□□□□ -0.42
VMA13P41807 ALF1YNL148C 765 nt12.36□□□□□ -0.43
VMA13P41807 RPP2AYOL039W 321 nt12.32□□□□□ -0.44
VMA13P41807 BDF1YLR399C 2061 nt12.31□□□□□ -0.44
VMA13P41807 RKM5YLR137W 1104 nt12.31□□□□□ -0.44
VMA13P41807 SIS1YNL007C 1059 nt12.31□□□□□ -0.44
VMA13P41807 EMI2YDR516C 1503 nt12.31□□□□□ -0.44
VMA13P41807 CAC2YML102W 1407 nt12.3□□□□□ -0.44
VMA13P41807 SUF2tP(AGG)C 72 nt12.25□□□□□ -0.45
VMA13P41807 SUF10tP(AGG)N 72 nt12.25□□□□□ -0.45
VMA13P41807 Q0182Q0182 405 nt12.24□□□□□ -0.45
VMA13P41807 YDL221WYDL221W 552 nt12.22□□□□□ -0.45
VMA13P41807 YBR220CYBR220C 1683 nt12.2□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms